| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is aroH [H]
Identifier: 145296140
GI number: 145296140
Start: 2271697
End: 2273043
Strand: Reverse
Name: aroH [H]
Synonym: cgR_2060
Alternate gene names: 145296140
Gene position: 2273043-2271697 (Counterclockwise)
Preceding gene: 145296141
Following gene: 145296136
Centisome position: 68.59
GC content: 55.68
Gene sequence:
>1347_bases TTGCCACCATTGCCAGAAGGCATGCAGCAGCAGTTCGAGGACACCATTTCCCGTGACGCTAAGCAGCAACCTACGTGGGA TCGTGCACAGGCAGAAAACGTGCGCAAGATCCTTGAGTCGGTTCCTCCAATCGTTGTTGCCCCTGAGGTACTTGAGCTGA AGCAGAAGCTTGCTGATGTTGCTAACGGTAAGGCCTTCCTCTTGCAGGGTGGTGACTGTGCGGAAACTTTCGAGTCAAAC ACCGAGCCGCACATTCGCGCCAACGTAAAGACTCTGCTGCAGATGGCAGTTGTTTTGACCTACGGTGCATCCACTCCCGT GATCAAGATGGCTCGTATTGCTGGTCAGTACGCAAAGCCTCGCTCTTCTGATTTGGATGGAAATGGTCTGCCAAACTACC GTGGCGATATCGTCAACGGTGTGGAGGCAACCCCTGAGGCTCGTCGCCACGATCCTGCCCGCATGATCCGTGCTTACGCT AACGCTTCTGCTGCGATGAACTTGGTGCGCGCGCTCACCAGCTCTGGCACCGCTGATCTTTACCGTCTCAGCGAGTGGAA CCGCGAGTTCGTTGCGAACTCCCCAGCTGGTGCACGCTACGAGGCTCTTGCTCGTGAGATCGACTCCGGTCTGCGCTTCA TGGAAGCATGTGGCGTGTCCGATGAGTCCCTGCGCGCTGCAGATATTTACTGCTCCCACGAGGCACTTCTCGTGGATTAC GAGCGCTCCATGCTGCGTCTTGCAACCGATGAGGAAGGCAACGAGGAACTTTACGATCTTTCAGCTCACCAGCTGTGGAT CGGCGAGCGCACCCGCGGTATGGATGATTTCCATGTGAACTTCGCATCCATGATCTCTAACCCAATCGGCATCAAGATTG GTCCTGGTATCACCCCTGAAGAGGCTGTTGCATACGCTGACAAGCTCGATCCGAACTTCGAGCCTGGCCGTTTGACCATC GTTGCTCGCATGGGCCACGACAAGGTTCGCTCCGTACTTCCTGGTGTTATCCAGGCTGTTGAGGCATCCGGACACAAGGT TATTTGGCAGTCCGATCCGATGCACGGCAATACCTTCACCGCATCCAATGGCTACAAGACCCGTCACTTCGACAAGGTTA TCGATGAGGTCCAGGGCTTCTTCGAGGTCCACCGCGCATTGGGCACCCACCCAGGCGGAATCCACATTGAGTTCACTGGT GAAGATGTCACCGAGTGCCTCGGTGGCGCTGAAGACATCACCGATGTTGATCTGCCAGGCCGCTACGAGTCCGCATGCGA TCCTCGCCTGAACACTCAGCAGTCTTTGGAGTTGGCTTTCCTCGTTGCAGAAATGCTGCGTAATTAA
Upstream 100 bases:
>100_bases GAAAACTTAACTGTTATTCCATTCCTTAAAACACCGATATCGTGCTATGAATAGGGGTGTGAGTTGGACAGTTGATATCC CTAAAGAAGTTCTCCCTGAT
Downstream 100 bases:
>100_bases GCTTTTAGACCAACTCTAGAAATAAGTGTGGGGGCTGACAACAATTGTTGTCAGCCCCCACACCTTTATCTATTTGGCTA TTTTGGGAAATGCTTTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MPPLPEGMQQQFEDTISRDAKQQPTWDRAQAENVRKILESVPPIVVAPEVLELKQKLADVANGKAFLLQGGDCAETFESN TEPHIRANVKTLLQMAVVLTYGASTPVIKMARIAGQYAKPRSSDLDGNGLPNYRGDIVNGVEATPEARRHDPARMIRAYA NASAAMNLVRALTSSGTADLYRLSEWNREFVANSPAGARYEALAREIDSGLRFMEACGVSDESLRAADIYCSHEALLVDY ERSMLRLATDEEGNEELYDLSAHQLWIGERTRGMDDFHVNFASMISNPIGIKIGPGITPEEAVAYADKLDPNFEPGRLTI VARMGHDKVRSVLPGVIQAVEASGHKVIWQSDPMHGNTFTASNGYKTRHFDKVIDEVQGFFEVHRALGTHPGGIHIEFTG EDVTECLGGAEDITDVDLPGRYESACDPRLNTQQSLELAFLVAEMLRN
Sequences:
>Translated_448_residues MPPLPEGMQQQFEDTISRDAKQQPTWDRAQAENVRKILESVPPIVVAPEVLELKQKLADVANGKAFLLQGGDCAETFESN TEPHIRANVKTLLQMAVVLTYGASTPVIKMARIAGQYAKPRSSDLDGNGLPNYRGDIVNGVEATPEARRHDPARMIRAYA NASAAMNLVRALTSSGTADLYRLSEWNREFVANSPAGARYEALAREIDSGLRFMEACGVSDESLRAADIYCSHEALLVDY ERSMLRLATDEEGNEELYDLSAHQLWIGERTRGMDDFHVNFASMISNPIGIKIGPGITPEEAVAYADKLDPNFEPGRLTI VARMGHDKVRSVLPGVIQAVEASGHKVIWQSDPMHGNTFTASNGYKTRHFDKVIDEVQGFFEVHRALGTHPGGIHIEFTG EDVTECLGGAEDITDVDLPGRYESACDPRLNTQQSLELAFLVAEMLRN >Mature_447_residues PPLPEGMQQQFEDTISRDAKQQPTWDRAQAENVRKILESVPPIVVAPEVLELKQKLADVANGKAFLLQGGDCAETFESNT EPHIRANVKTLLQMAVVLTYGASTPVIKMARIAGQYAKPRSSDLDGNGLPNYRGDIVNGVEATPEARRHDPARMIRAYAN ASAAMNLVRALTSSGTADLYRLSEWNREFVANSPAGARYEALAREIDSGLRFMEACGVSDESLRAADIYCSHEALLVDYE RSMLRLATDEEGNEELYDLSAHQLWIGERTRGMDDFHVNFASMISNPIGIKIGPGITPEEAVAYADKLDPNFEPGRLTIV ARMGHDKVRSVLPGVIQAVEASGHKVIWQSDPMHGNTFTASNGYKTRHFDKVIDEVQGFFEVHRALGTHPGGIHIEFTGE DVTECLGGAEDITDVDLPGRYESACDPRLNTQQSLELAFLVAEMLRN
Specific function: Unknown
COG id: COG3200
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II DAHP synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002480 [H]
Pfam domain/function: PF01474 DAHP_synth_2 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 49309; Mature: 49178
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLPEGMQQQFEDTISRDAKQQPTWDRAQAENVRKILESVPPIVVAPEVLELKQKLADV CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHH ANGKAFLLQGGDCAETFESNTEPHIRANVKTLLQMAVVLTYGASTPVIKMARIAGQYAKP CCCCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC RSSDLDGNGLPNYRGDIVNGVEATPEARRHDPARMIRAYANASAAMNLVRALTSSGTADL CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH YRLSEWNREFVANSPAGARYEALAREIDSGLRFMEACGVSDESLRAADIYCSHEALLVDY HHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCEEEEEH ERSMLRLATDEEGNEELYDLSAHQLWIGERTRGMDDFHVNFASMISNPIGIKIGPGITPE HHHHHHHHCCCCCCCHHHHCCHHEEEECHHHCCCCHHHEEHHHHHCCCCCEEECCCCCHH EAVAYADKLDPNFEPGRLTIVARMGHDKVRSVLPGVIQAVEASGHKVIWQSDPMHGNTFT HHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEE ASNGYKTRHFDKVIDEVQGFFEVHRALGTHPGGIHIEFTGEDVTECLGGAEDITDVDLPG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCC RYESACDPRLNTQQSLELAFLVAEMLRN CCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PPLPEGMQQQFEDTISRDAKQQPTWDRAQAENVRKILESVPPIVVAPEVLELKQKLADV CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHH ANGKAFLLQGGDCAETFESNTEPHIRANVKTLLQMAVVLTYGASTPVIKMARIAGQYAKP CCCCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC RSSDLDGNGLPNYRGDIVNGVEATPEARRHDPARMIRAYANASAAMNLVRALTSSGTADL CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH YRLSEWNREFVANSPAGARYEALAREIDSGLRFMEACGVSDESLRAADIYCSHEALLVDY HHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCEEEEEH ERSMLRLATDEEGNEELYDLSAHQLWIGERTRGMDDFHVNFASMISNPIGIKIGPGITPE HHHHHHHHCCCCCCCHHHHCCHHEEEECHHHCCCCHHHEEHHHHHCCCCCEEECCCCCHH EAVAYADKLDPNFEPGRLTIVARMGHDKVRSVLPGVIQAVEASGHKVIWQSDPMHGNTFT HHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEE ASNGYKTRHFDKVIDEVQGFFEVHRALGTHPGGIHIEFTGEDVTECLGGAEDITDVDLPG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCC RYESACDPRLNTQQSLELAFLVAEMLRN CCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953; 8760910 [H]