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The map label for this gene is treZ [H]

Identifier: 145296087

GI number: 145296087

Start: 2206988

End: 2208820

Strand: Direct

Name: treZ [H]

Synonym: cgR_2009

Alternate gene names: 145296087

Gene position: 2206988-2208820 (Clockwise)

Preceding gene: 145296083

Following gene: 145296089

Centisome position: 66.59

GC content: 57.56

Gene sequence:

>1833_bases
GTGCTCAAAGACTCGATCGGCCTGAGGGAGTTGATATTGCGTGAGATGTGCCATAGCATCTCACATCTTAACCCGCCTAG
TCTCAGTATTTTCGCTAACCTGGTGGCCATGTTAACCTCGCAAAGCTTTTCGGTGTGGGCTCCTTTGCCCAAAGATGTAC
AACTTATCCTCAACGGCGAAACCTTTCCCATGACAAAAACGGAAGGCAGCTGGTGGCGCGCCGAGATCGCACCCAAGGCC
GGCGATCGTTACGGTTTTTCGCTTTTCGACGGCTCCTCCTGGTCCAAACCCCTGCCCGATCCCCGCTCCACATCTCAACC
AGACGGGGTTCATGGTTTAAGTGAAGTCTCCGAAGATTCCTATCTGTGGGGTGACCAGCAGTGGACTGGCCGAATTCTCC
CTGGCTCGGTGTTATATGAGCTGCATGTGGGCACCTTTAGTGAAGATGGAACATTTGAGGGAGTCGTCGACAAGCTTCCT
TATCTGCGCGACCTCGGCGTGACCGCCATCGAACTTTTACCTGTGCAGCCCTTTGGCGGCAACCGCAATTGGGGCTACGA
CGGGGTGCTGTGGCACGCCGTCCATGCAGGCTACGGCGGTCCGGCGGGCTTGAAAAAGCTTATCGACGCCTCCCACCAGG
CCGGCATCGCCGTCTACTTAGACGTCGTGTACAACCACTTCGGCCCCGACGGCAACTACAACGGGCAATTTGGCCCCTAC
ACCTCTGGCGGCAGCACCGGCTGGGGCGACGTGGTCAACATCAACGGCCATGATTCAGATGAAGTCCGCAATTATATTCT
CGACGCCGCACGCCAGTGGTTCGAAGATTTTCACGTTGATGGGCTCCGCCTCGATGCGGTGCATTCTCTCGATGATCGCG
GCGCCTATTCCCTACTTGCGCAGCTGACCATGGTGGCCGAGGATGTCTCCGCGCAAACAGGCATCCCACGCTCATTGATT
GCAGAATCCGAACTCAATGACCCCAAGCTCGTTACCTCCCGCGAGGCCGGCGGTTTTGGCCTGGATGCACAGTGGGTTGA
CGATATCCACCACGCCCTCCATGCCCTCGTTTCTGGCGAACGCAATGGTTATTACAGCGATTTCGGATCTGTTGACACCT
TGGCAAAAACCCTGCGTGAAGTATTTGAACACACCGGAAACTACTCCACGTACCGCGGACGCAACCACGGCCGCCCTGTG
CACCCCGATATCACCCCTGCCTCGCGCTTTGTCACCTACACCACCACCCATGATCAGACCGGCAACCGCGCAATCGGCGA
CCGTCCTTCCATGACTCTCACCCCGGAACAGCAGGTGTTGAAGGCAGCCATTATCTACAGCTCGCCGTATACCCCGATGT
TGTTTATGGGTGAAGAATTCGGAGCCACCACCCCGTTCGCTTTCTTCTGCTCGCATACCGACCCCGAGCTCAACCGCCTA
ACCTCCGAGGGCCGCAAACGGGAATTCGCACGCCTTGGCTGGAACGCCGACGACATCCCCTCCCCCGAGCTGGAATCCAC
CTTCACCTCCTCCAAACTCGATTGGGAGTTCACTGCGGAGCAGCGCCGCATCAACGACGCTTACAAGCAGCTGTTGCACC
TGCGGCACACCTTGGGCTTCTCCCAACCAAACTTGCTCACACTCGAGGTTGAGCACGGCGAGAACTGGCTATCGATGGCC
AATGGTCGCGGCCGAATTCTGGCGAATTTCTCCGACGACACCATCACCGTCCCCTTTGGAGGCGAGTTGATTTACAGCTT
CACCTCCCCCACTGTCACCGACACCTCCACAACCCTTCAGCCGTGGGGCTTTGCGATCCTGACCCGAAACTAG

Upstream 100 bases:

>100_bases
GATACAACTCCTTGATGGAGTGAATAAATTCCCGCGCCTGCTCCTGATCTTGCACACGCGTGATATAGGTCAAAAATCGC
GAGCGCTTGATCTCTAGTTC

Downstream 100 bases:

>100_bases
AAAAAGGCCACCTCGATTGAGGTGGCCTTCAGCTATGTTTAGGTCAAGTATTCGTACTCAGGGGTTCCCGGCTCGAGGCG
ACGGGAATCAATTGCCGATT

Product: hypothetical protein

Products: NA

Alternate protein names: MTHase; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; Maltooligosyl trehalose trehalohydrolase [H]

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MLKDSIGLRELILREMCHSISHLNPPSLSIFANLVAMLTSQSFSVWAPLPKDVQLILNGETFPMTKTEGSWWRAEIAPKA
GDRYGFSLFDGSSWSKPLPDPRSTSQPDGVHGLSEVSEDSYLWGDQQWTGRILPGSVLYELHVGTFSEDGTFEGVVDKLP
YLRDLGVTAIELLPVQPFGGNRNWGYDGVLWHAVHAGYGGPAGLKKLIDASHQAGIAVYLDVVYNHFGPDGNYNGQFGPY
TSGGSTGWGDVVNINGHDSDEVRNYILDAARQWFEDFHVDGLRLDAVHSLDDRGAYSLLAQLTMVAEDVSAQTGIPRSLI
AESELNDPKLVTSREAGGFGLDAQWVDDIHHALHALVSGERNGYYSDFGSVDTLAKTLREVFEHTGNYSTYRGRNHGRPV
HPDITPASRFVTYTTTHDQTGNRAIGDRPSMTLTPEQQVLKAAIIYSSPYTPMLFMGEEFGATTPFAFFCSHTDPELNRL
TSEGRKREFARLGWNADDIPSPELESTFTSSKLDWEFTAEQRRINDAYKQLLHLRHTLGFSQPNLLTLEVEHGENWLSMA
NGRGRILANFSDDTITVPFGGELIYSFTSPTVTDTSTTLQPWGFAILTRN

Sequences:

>Translated_610_residues
MLKDSIGLRELILREMCHSISHLNPPSLSIFANLVAMLTSQSFSVWAPLPKDVQLILNGETFPMTKTEGSWWRAEIAPKA
GDRYGFSLFDGSSWSKPLPDPRSTSQPDGVHGLSEVSEDSYLWGDQQWTGRILPGSVLYELHVGTFSEDGTFEGVVDKLP
YLRDLGVTAIELLPVQPFGGNRNWGYDGVLWHAVHAGYGGPAGLKKLIDASHQAGIAVYLDVVYNHFGPDGNYNGQFGPY
TSGGSTGWGDVVNINGHDSDEVRNYILDAARQWFEDFHVDGLRLDAVHSLDDRGAYSLLAQLTMVAEDVSAQTGIPRSLI
AESELNDPKLVTSREAGGFGLDAQWVDDIHHALHALVSGERNGYYSDFGSVDTLAKTLREVFEHTGNYSTYRGRNHGRPV
HPDITPASRFVTYTTTHDQTGNRAIGDRPSMTLTPEQQVLKAAIIYSSPYTPMLFMGEEFGATTPFAFFCSHTDPELNRL
TSEGRKREFARLGWNADDIPSPELESTFTSSKLDWEFTAEQRRINDAYKQLLHLRHTLGFSQPNLLTLEVEHGENWLSMA
NGRGRILANFSDDTITVPFGGELIYSFTSPTVTDTSTTLQPWGFAILTRN
>Mature_610_residues
MLKDSIGLRELILREMCHSISHLNPPSLSIFANLVAMLTSQSFSVWAPLPKDVQLILNGETFPMTKTEGSWWRAEIAPKA
GDRYGFSLFDGSSWSKPLPDPRSTSQPDGVHGLSEVSEDSYLWGDQQWTGRILPGSVLYELHVGTFSEDGTFEGVVDKLP
YLRDLGVTAIELLPVQPFGGNRNWGYDGVLWHAVHAGYGGPAGLKKLIDASHQAGIAVYLDVVYNHFGPDGNYNGQFGPY
TSGGSTGWGDVVNINGHDSDEVRNYILDAARQWFEDFHVDGLRLDAVHSLDDRGAYSLLAQLTMVAEDVSAQTGIPRSLI
AESELNDPKLVTSREAGGFGLDAQWVDDIHHALHALVSGERNGYYSDFGSVDTLAKTLREVFEHTGNYSTYRGRNHGRPV
HPDITPASRFVTYTTTHDQTGNRAIGDRPSMTLTPEQQVLKAAIIYSSPYTPMLFMGEEFGATTPFAFFCSHTDPELNRL
TSEGRKREFARLGWNADDIPSPELESTFTSSKLDWEFTAEQRRINDAYKQLLHLRHTLGFSQPNLLTLEVEHGENWLSMA
NGRGRILANFSDDTITVPFGGELIYSFTSPTVTDTSTTLQPWGFAILTRN

Specific function: Catalyzes The Formation Of The Alpha-1,6-Glucosidic Linkages In Glycogen By Scission Of A 1,4-Alpha-Linked Oligosaccharide From Growing Alpha-1,4-Glucan Chains And The Subsequent Attachment Of The Oligosaccharide To The Alpha-1,6 Position. Has A Preferenc

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=164, Percent_Identity=29.8780487804878, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1789839, Length=296, Percent_Identity=27.027027027027, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI2367229, Length=209, Percent_Identity=30.1435406698565, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17554896, Length=239, Percent_Identity=28.4518828451883, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI32564391, Length=239, Percent_Identity=28.4518828451883, Blast_Score=73, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6320826, Length=166, Percent_Identity=28.9156626506024, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI28573410, Length=279, Percent_Identity=25.089605734767, Blast_Score=73, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- InterPro:   IPR022567
- InterPro:   IPR012768 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF11941 DUF3459 [H]

EC number: =3.2.1.141 [H]

Molecular weight: Translated: 67602; Mature: 67602

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKDSIGLRELILREMCHSISHLNPPSLSIFANLVAMLTSQSFSVWAPLPKDVQLILNGE
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCC
TFPMTKTEGSWWRAEIAPKAGDRYGFSLFDGSSWSKPLPDPRSTSQPDGVHGLSEVSEDS
CCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
YLWGDQQWTGRILPGSVLYELHVGTFSEDGTFEGVVDKLPYLRDLGVTAIELLPVQPFGG
EEECCCCCCCEECCCEEEEEEECCCCCCCCCHHHHHHHCCHHHHCCCEEEEEEECCCCCC
NRNWGYDGVLWHAVHAGYGGPAGLKKLIDASHQAGIAVYLDVVYNHFGPDGNYNGQFGPY
CCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCC
TSGGSTGWGDVVNINGHDSDEVRNYILDAARQWFEDFHVDGLRLDAVHSLDDRGAYSLLA
CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCHHHHHHH
QLTMVAEDVSAQTGIPRSLIAESELNDPKLVTSREAGGFGLDAQWVDDIHHALHALVSGE
HHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
RNGYYSDFGSVDTLAKTLREVFEHTGNYSTYRGRNHGRPVHPDITPASRFVTYTTTHDQT
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCC
GNRAIGDRPSMTLTPEQQVLKAAIIYSSPYTPMLFMGEEFGATTPFAFFCSHTDPELNRL
CCCCCCCCCCEEECCHHHHHHHHHEECCCCCCEEEECHHHCCCCCEEEEECCCCHHHHHH
TSEGRKREFARLGWNADDIPSPELESTFTSSKLDWEFTAEQRRINDAYKQLLHLRHTLGF
HHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCC
SQPNLLTLEVEHGENWLSMANGRGRILANFSDDTITVPFGGELIYSFTSPTVTDTSTTLQ
CCCCEEEEEEECCCCEEECCCCCCEEEEECCCCEEEEECCCEEEEEECCCCCCCCCCCCC
PWGFAILTRN
CCCEEEEECC
>Mature Secondary Structure
MLKDSIGLRELILREMCHSISHLNPPSLSIFANLVAMLTSQSFSVWAPLPKDVQLILNGE
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCC
TFPMTKTEGSWWRAEIAPKAGDRYGFSLFDGSSWSKPLPDPRSTSQPDGVHGLSEVSEDS
CCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
YLWGDQQWTGRILPGSVLYELHVGTFSEDGTFEGVVDKLPYLRDLGVTAIELLPVQPFGG
EEECCCCCCCEECCCEEEEEEECCCCCCCCCHHHHHHHCCHHHHCCCEEEEEEECCCCCC
NRNWGYDGVLWHAVHAGYGGPAGLKKLIDASHQAGIAVYLDVVYNHFGPDGNYNGQFGPY
CCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCC
TSGGSTGWGDVVNINGHDSDEVRNYILDAARQWFEDFHVDGLRLDAVHSLDDRGAYSLLA
CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCHHHHHHH
QLTMVAEDVSAQTGIPRSLIAESELNDPKLVTSREAGGFGLDAQWVDDIHHALHALVSGE
HHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
RNGYYSDFGSVDTLAKTLREVFEHTGNYSTYRGRNHGRPVHPDITPASRFVTYTTTHDQT
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCC
GNRAIGDRPSMTLTPEQQVLKAAIIYSSPYTPMLFMGEEFGATTPFAFFCSHTDPELNRL
CCCCCCCCCCEEECCHHHHHHHHHEECCCCCCEEEECHHHCCCCCEEEEECCCCHHHHHH
TSEGRKREFARLGWNADDIPSPELESTFTSSKLDWEFTAEQRRINDAYKQLLHLRHTLGF
HHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCC
SQPNLLTLEVEHGENWLSMANGRGRILANFSDDTITVPFGGELIYSFTSPTVTDTSTTLQ
CCCCEEEEEEECCCCEEECCCCCCEEEEECCCCEEEEECCCEEEEEECCCCCCCCCCCCC
PWGFAILTRN
CCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]