| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is treY [H]
Identifier: 145296080
GI number: 145296080
Start: 2200539
End: 2202974
Strand: Direct
Name: treY [H]
Synonym: cgR_2002
Alternate gene names: 145296080
Gene position: 2200539-2202974 (Clockwise)
Preceding gene: 145296079
Following gene: 145296081
Centisome position: 66.4
GC content: 55.54
Gene sequence:
>2436_bases ATGGCACGTCCAATTTCCGCAACGTACAGGCTTCAAATGCGAGGACCTCAAGCAGATAGCGCCGGGCGTTCATTTGGTTT TGCGCAGGCCAAAGCCCAGCTTCCCTATCTGAAGAAGCTAGGCATCAGCCACCTGTACCTCTCCCCTATTTTTACGGCCA TGCCAGATTCCAATCATGGCTACGATGTCATTGATCCCACCACCATCAATGAAGAGCTCGGTGGCATGGAGGGTCTTCGA GATCTTGCCGCAGCGGCTCACGAGTTGGGCATGGGCATCATCATTGATATTGTTCCCAACCATTTAGGTGTTGCCGTTCC GCATTTGAATCCTTGGTGGTGGGATGTTCTAAAAAACGGCAAAGATTCCGCTTTTGAGTTCTATTTCGATATTGATTGGC ACGAAGACAACGGTTCTGGTGGCAAGCTGGGCATGCCGATTCTGGGTGCTGAAGGCGATGAAGACAAGCTGGAATTCGCG GAGCTTGATGGAGAGAAAGTGCTCAAATATTTTGACCACCTCTTCCCAATCGCGCCTGGTACCGAAGAAGGGACACCGCA AGAAGTCTACAAGCGCCAGCATTACCGCCTGCAGTTCTGGCGCGACGGCGTGATCAACTTCCGTCGCTTCTTTTCCGTGA ATACGTTGGCTGGCATCAGGCAAGAAGATCCCTTGGTGTTTGAACATACTCATCGTCTGCTGCGCGAATTGGTGGCGGAA GACCTCATTGACGGCGTGCGCGTCGATCACCCCGACGGGCTTTCCGATCCTTTTGGATATCTGCACAGACTCCGCGACCT CATTGGACCTGACCGCTGGCTGATCATCGAAAAGATCTTGAGCGTTGATGAACCACTCGATCCCCGCCTGGCCGTTGATG GCACCACTGGCTACGACGCCCTCCGTGAACTCGACGGCGTGTTTATCTCCCGAGAATCTGAGGACAAATTCTCCATGCTG GCGCTGACCCACAGTGGATCCACCTGGGATGAACGCGCCCTCAAATCCACGGAGGAAAGCCTCAAACGAGTCGTCGCCCA ACAAGAACTCGCAGCCGAAATCTTAAGGCTCGCCCGCGCCATGCGCCGCGACAACTTCTCCACCGCAGGCACCAACGTCA CCGAAGACAAACTTAGCGAAACCATCATCGAATTAGTCGCCGCCATGCCCGTCTACCGCGCCGACTACATCTCCCTCTCA CGCACCACCGCCACCGTCATCGCGGAGATGTCCAAACGCTTCCCCTCCCGGCGTGACGCACTCGACCTCATCGCGGCCGC CCTACTTGGCAATGGCGAGGCCAAAATCCGCTTCGCTCAAGTCTGCGGCGCCGTCATGGCTAAAGGTGTGGAAGACACCA CCTTCTACCGCGCATCTAGGCTCGTTGCATTGCAAGAAGTCGGTGGCGCGCCGGGGAGATTCGGCGTCTCCGCTGCAGAA TTCCACTTGCTGCAGGAAGAACGCAGCCTGCTGTGGCCACGCACCATGACCACCTTGTCCACGCATGACACCAAACGTGG CGAAGATACCCGCGCCCGCATCATCTCCCTGTCTGAAGTCCCCGATATGTACTCCGAGCTGGTCAATCGTGTTTTCGCGG TGCTCCCCGCGCCAGACGGCGCAACGGGCAGTTTCCTCCTACAAAACCTGCTGGGCGTATGGCCCGCCGACGGCGTGATC ACCGATGCGCTGCGCGATCGATTCAGGGAATACGCCCTAAAAGCTATCCGCGAAGCATCCACAAAAACCACGTGGGTGGA CCCCAACGAGTCCTTCGAGGCTGCGGTCTGCGATTGGGTGGAAGCGCTTTTCGACGGACCCTCCACCTCATTAATCACCG AATTTGTCTCCCACATCAACCGTGGCTCTGTTCAAATCTCCTTAGGCAGGAAACTGCTGCAAATGGTGGGCGCTGGAATC CCCGACACTTACCAAGGAACTGAGTTTTTAGAAGACTCCCTGGTAGATCCCGATAACCGACGCTTTGTTGATTACACCGC CAGAGAACAAGTCCTGGAGCGCCTGCAAACCTGGGATTGGACGCAGGTTAATTCGGTAGAAGACTTGGTGGATAACGCCG ACATCGCCAAAATGGCCGTGGTCCATAAATCCCTCGAGTTGCGTGCTGAATTTCGTGCAAGCTTTGTTGGTGGAGATCAT CAGGCAGTATTTGGCGAAGGTCGCGCAGAATCCCACATCATGGGCATCGCCCGCGGTACAGACCGAAACCACCTCAACAT CATTGCTCTTGCTACCCGTCGACCACTGATCTTGGAAGACCGTGGCGGATGGTATGACACCACCGTCACGCTTCCTGGTG GACAATGGGAAGACAGGCTCACCGGGCAACGCTTCAGTGGTGTTGTCCCAGCCACCGATTTGTTCTCACATCTACCCGTA TCTTTGTTGGTTTTAGTACCCGATAGTGAGTTTTGA
Upstream 100 bases:
>100_bases GCACTTGCTGCGTAAATCTTTTTCCCACGCAGGGAAGGCGTGAACACTAAGATCGAGGACGTACCGCACGATTTTGCCTA ACTTTTAAGGGTGTTTCATC
Downstream 100 bases:
>100_bases TCCCTGCACAGGAAAGTTAGCGGCGCTACTATGAACGATCGATATGTCTGACAACACTCTCTCCCAATTTGGCAGTTACT ACCACGAATTCCGACGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase [H]
Number of amino acids: Translated: 811; Mature: 810
Protein sequence:
>811_residues MARPISATYRLQMRGPQADSAGRSFGFAQAKAQLPYLKKLGISHLYLSPIFTAMPDSNHGYDVIDPTTINEELGGMEGLR DLAAAAHELGMGIIIDIVPNHLGVAVPHLNPWWWDVLKNGKDSAFEFYFDIDWHEDNGSGGKLGMPILGAEGDEDKLEFA ELDGEKVLKYFDHLFPIAPGTEEGTPQEVYKRQHYRLQFWRDGVINFRRFFSVNTLAGIRQEDPLVFEHTHRLLRELVAE DLIDGVRVDHPDGLSDPFGYLHRLRDLIGPDRWLIIEKILSVDEPLDPRLAVDGTTGYDALRELDGVFISRESEDKFSML ALTHSGSTWDERALKSTEESLKRVVAQQELAAEILRLARAMRRDNFSTAGTNVTEDKLSETIIELVAAMPVYRADYISLS RTTATVIAEMSKRFPSRRDALDLIAAALLGNGEAKIRFAQVCGAVMAKGVEDTTFYRASRLVALQEVGGAPGRFGVSAAE FHLLQEERSLLWPRTMTTLSTHDTKRGEDTRARIISLSEVPDMYSELVNRVFAVLPAPDGATGSFLLQNLLGVWPADGVI TDALRDRFREYALKAIREASTKTTWVDPNESFEAAVCDWVEALFDGPSTSLITEFVSHINRGSVQISLGRKLLQMVGAGI PDTYQGTEFLEDSLVDPDNRRFVDYTAREQVLERLQTWDWTQVNSVEDLVDNADIAKMAVVHKSLELRAEFRASFVGGDH QAVFGEGRAESHIMGIARGTDRNHLNIIALATRRPLILEDRGGWYDTTVTLPGGQWEDRLTGQRFSGVVPATDLFSHLPV SLLVLVPDSEF
Sequences:
>Translated_811_residues MARPISATYRLQMRGPQADSAGRSFGFAQAKAQLPYLKKLGISHLYLSPIFTAMPDSNHGYDVIDPTTINEELGGMEGLR DLAAAAHELGMGIIIDIVPNHLGVAVPHLNPWWWDVLKNGKDSAFEFYFDIDWHEDNGSGGKLGMPILGAEGDEDKLEFA ELDGEKVLKYFDHLFPIAPGTEEGTPQEVYKRQHYRLQFWRDGVINFRRFFSVNTLAGIRQEDPLVFEHTHRLLRELVAE DLIDGVRVDHPDGLSDPFGYLHRLRDLIGPDRWLIIEKILSVDEPLDPRLAVDGTTGYDALRELDGVFISRESEDKFSML ALTHSGSTWDERALKSTEESLKRVVAQQELAAEILRLARAMRRDNFSTAGTNVTEDKLSETIIELVAAMPVYRADYISLS RTTATVIAEMSKRFPSRRDALDLIAAALLGNGEAKIRFAQVCGAVMAKGVEDTTFYRASRLVALQEVGGAPGRFGVSAAE FHLLQEERSLLWPRTMTTLSTHDTKRGEDTRARIISLSEVPDMYSELVNRVFAVLPAPDGATGSFLLQNLLGVWPADGVI TDALRDRFREYALKAIREASTKTTWVDPNESFEAAVCDWVEALFDGPSTSLITEFVSHINRGSVQISLGRKLLQMVGAGI PDTYQGTEFLEDSLVDPDNRRFVDYTAREQVLERLQTWDWTQVNSVEDLVDNADIAKMAVVHKSLELRAEFRASFVGGDH QAVFGEGRAESHIMGIARGTDRNHLNIIALATRRPLILEDRGGWYDTTVTLPGGQWEDRLTGQRFSGVVPATDLFSHLPV SLLVLVPDSEF >Mature_810_residues ARPISATYRLQMRGPQADSAGRSFGFAQAKAQLPYLKKLGISHLYLSPIFTAMPDSNHGYDVIDPTTINEELGGMEGLRD LAAAAHELGMGIIIDIVPNHLGVAVPHLNPWWWDVLKNGKDSAFEFYFDIDWHEDNGSGGKLGMPILGAEGDEDKLEFAE LDGEKVLKYFDHLFPIAPGTEEGTPQEVYKRQHYRLQFWRDGVINFRRFFSVNTLAGIRQEDPLVFEHTHRLLRELVAED LIDGVRVDHPDGLSDPFGYLHRLRDLIGPDRWLIIEKILSVDEPLDPRLAVDGTTGYDALRELDGVFISRESEDKFSMLA LTHSGSTWDERALKSTEESLKRVVAQQELAAEILRLARAMRRDNFSTAGTNVTEDKLSETIIELVAAMPVYRADYISLSR TTATVIAEMSKRFPSRRDALDLIAAALLGNGEAKIRFAQVCGAVMAKGVEDTTFYRASRLVALQEVGGAPGRFGVSAAEF HLLQEERSLLWPRTMTTLSTHDTKRGEDTRARIISLSEVPDMYSELVNRVFAVLPAPDGATGSFLLQNLLGVWPADGVIT DALRDRFREYALKAIREASTKTTWVDPNESFEAAVCDWVEALFDGPSTSLITEFVSHINRGSVQISLGRKLLQMVGAGIP DTYQGTEFLEDSLVDPDNRRFVDYTAREQVLERLQTWDWTQVNSVEDLVDNADIAKMAVVHKSLELRAEFRASFVGGDHQ AVFGEGRAESHIMGIARGTDRNHLNIIALATRRPLILEDRGGWYDTTVTLPGGQWEDRLTGQRFSGVVPATDLFSHLPVS LLVLVPDSEF
Specific function: Catalyzes the conversion of maltooligosaccharide into the non-reducing saccharide, maltooligosyl trehalose (alpha- maltooligosyl alpha-D-glucoside) by intramolecular transglycosylation [H]
COG id: COG3280
COG function: function code G; Maltooligosyl trehalose synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Drosophila melanogaster, GI24586589, Length=93, Percent_Identity=44.0860215053763, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24586597, Length=182, Percent_Identity=31.3186813186813, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013797 - InterPro: IPR012767 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.15 [H]
Molecular weight: Translated: 90483; Mature: 90352
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPISATYRLQMRGPQADSAGRSFGFAQAKAQLPYLKKLGISHLYLSPIFTAMPDSNHG CCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCC YDVIDPTTINEELGGMEGLRDLAAAAHELGMGIIIDIVPNHLGVAVPHLNPWWWDVLKNG CCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCHHHHHHHHCC KDSAFEFYFDIDWHEDNGSGGKLGMPILGAEGDEDKLEFAELDGEKVLKYFDHLFPIAPG CCCEEEEEEEEEEECCCCCCCEECCEEECCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCC TEEGTPQEVYKRQHYRLQFWRDGVINFRRFFSVNTLAGIRQEDPLVFEHTHRLLRELVAE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH DLIDGVRVDHPDGLSDPFGYLHRLRDLIGPDRWLIIEKILSVDEPLDPRLAVDGTTGYDA HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEECCCCCHHH LRELDGVFISRESEDKFSMLALTHSGSTWDERALKSTEESLKRVVAQQELAAEILRLARA HHHHCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRRDNFSTAGTNVTEDKLSETIIELVAAMPVYRADYISLSRTTATVIAEMSKRFPSRRDA HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LDLIAAALLGNGEAKIRFAQVCGAVMAKGVEDTTFYRASRLVALQEVGGAPGRFGVSAAE HHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH FHLLQEERSLLWPRTMTTLSTHDTKRGEDTRARIISLSEVPDMYSELVNRVFAVLPAPDG HHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHEEECCCCC ATGSFLLQNLLGVWPADGVITDALRDRFREYALKAIREASTKTTWVDPNESFEAAVCDWV CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHH EALFDGPSTSLITEFVSHINRGSVQISLGRKLLQMVGAGIPDTYQGTEFLEDSLVDPDNR HHHHCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCC RFVDYTAREQVLERLQTWDWTQVNSVEDLVDNADIAKMAVVHKSLELRAEFRASFVGGDH EEECHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC QAVFGEGRAESHIMGIARGTDRNHLNIIALATRRPLILEDRGGWYDTTVTLPGGQWEDRL CEEECCCCCCHHEEEEECCCCCCCEEEEEEECCCCEEEECCCCEEEEEEECCCCCCHHHH TGQRFSGVVPATDLFSHLPVSLLVLVPDSEF CCCHHCCCCCHHHHHHHCCEEEEEEECCCCC >Mature Secondary Structure ARPISATYRLQMRGPQADSAGRSFGFAQAKAQLPYLKKLGISHLYLSPIFTAMPDSNHG CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCC YDVIDPTTINEELGGMEGLRDLAAAAHELGMGIIIDIVPNHLGVAVPHLNPWWWDVLKNG CCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCHHHHHHHHCC KDSAFEFYFDIDWHEDNGSGGKLGMPILGAEGDEDKLEFAELDGEKVLKYFDHLFPIAPG CCCEEEEEEEEEEECCCCCCCEECCEEECCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCC TEEGTPQEVYKRQHYRLQFWRDGVINFRRFFSVNTLAGIRQEDPLVFEHTHRLLRELVAE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH DLIDGVRVDHPDGLSDPFGYLHRLRDLIGPDRWLIIEKILSVDEPLDPRLAVDGTTGYDA HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEECCCCCHHH LRELDGVFISRESEDKFSMLALTHSGSTWDERALKSTEESLKRVVAQQELAAEILRLARA HHHHCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRRDNFSTAGTNVTEDKLSETIIELVAAMPVYRADYISLSRTTATVIAEMSKRFPSRRDA HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LDLIAAALLGNGEAKIRFAQVCGAVMAKGVEDTTFYRASRLVALQEVGGAPGRFGVSAAE HHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH FHLLQEERSLLWPRTMTTLSTHDTKRGEDTRARIISLSEVPDMYSELVNRVFAVLPAPDG HHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHEEECCCCC ATGSFLLQNLLGVWPADGVITDALRDRFREYALKAIREASTKTTWVDPNESFEAAVCDWV CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHH EALFDGPSTSLITEFVSHINRGSVQISLGRKLLQMVGAGIPDTYQGTEFLEDSLVDPDNR HHHHCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCC RFVDYTAREQVLERLQTWDWTQVNSVEDLVDNADIAKMAVVHKSLELRAEFRASFVGGDH EEECHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC QAVFGEGRAESHIMGIARGTDRNHLNIIALATRRPLILEDRGGWYDTTVTLPGGQWEDRL CEEECCCCCCHHEEEEECCCCCCCEEEEEEECCCCEEEECCCCEEEEEEECCCCCCHHHH TGQRFSGVVPATDLFSHLPVSLLVLVPDSEF CCCHHCCCCCHHHHHHHCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]