| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145295865
Identifier: 145295865
GI number: 145295865
Start: 1986940
End: 1987551
Strand: Direct
Name: 145295865
Synonym: cgR_1790
Alternate gene names: NA
Gene position: 1986940-1987551 (Clockwise)
Preceding gene: 145295864
Following gene: 145295870
Centisome position: 59.95
GC content: 52.61
Gene sequence:
>612_bases ATGAACAGTATTCCTTTAGGTTTTTACGTCGATAAGCAATCTGTTGTTCATTCTTTTCCTGCTTTGTGGAAATTCCCACT TCTGCTGTTTTTCATCATCGGCGGCTCCATCGCGGCTTCTACCCCGGTTCATGGGTTGATTTTGGTGGGGATTGCAGTGG TGTTTTACGTGCTGGCGAAGATTCCGCTGAAGGTCGCGTGGGAGCAGTTGTGGCCAGTGCTGCCGATTTTGATCATGCTC GGTGCGTTTCAGTGGTGGCAGCGCGGCTTTGATTTCGCGGCAACCACAGTGCTCACGCTGTTTTCTGCGGTGATGGCCGC CATGTTGTTGACGTTGACCACGCGGTTGGAAGCGCTCATGAATGCAGTTGAGCGGATGTTGCAGCCTTTTGCACGTTTTA GCCTGCCAGTAGAGACGATCACCTTGGCTATTTCTCTCACGATTCGGCTCATTCCGCTGCAATTAGCCACGGTGAAGGAA GTCCTCGATGCCCGTAAAGCTCGTGGTGCCGGTTTTTCTATCGCCGCGTTTGGCACGCCTGTGATCATCAGATCAATAAA GAGGGCCCGCAATATCGGCGATGCTCTTCTCGCTCGTGGTGCCGGCGATTAA
Upstream 100 bases:
>100_bases TTGAGCGGGTCATTTGTATCAATGATCATAAAATCGCTGCTGATGGCCCTCCGCAAAAGTCCATTGACCTGTACGTATCG CTTATGGCGGAACCTGCGAA
Downstream 100 bases:
>100_bases TTTCTTTCAACACATAGCAAAGCGGGGCTCGTACTAACGAAAGTACGAGCCCCGCTTTTAGTCTGCTGTGGCAGGTTTAA GCCTCGCCGCGCAGCTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter Permease Protein; Biotin ABC Transporter Permease; Cobalt Transport System Permease Protein; ABC-Type Biotin Transport System Permease; Cobalt ABC Transporter Permease CbiQ; Biotin ABC Transporter Permease Protein; Biotin ABC Transport System Permease Protein
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MNSIPLGFYVDKQSVVHSFPALWKFPLLLFFIIGGSIAASTPVHGLILVGIAVVFYVLAKIPLKVAWEQLWPVLPILIML GAFQWWQRGFDFAATTVLTLFSAVMAAMLLTLTTRLEALMNAVERMLQPFARFSLPVETITLAISLTIRLIPLQLATVKE VLDARKARGAGFSIAAFGTPVIIRSIKRARNIGDALLARGAGD
Sequences:
>Translated_203_residues MNSIPLGFYVDKQSVVHSFPALWKFPLLLFFIIGGSIAASTPVHGLILVGIAVVFYVLAKIPLKVAWEQLWPVLPILIML GAFQWWQRGFDFAATTVLTLFSAVMAAMLLTLTTRLEALMNAVERMLQPFARFSLPVETITLAISLTIRLIPLQLATVKE VLDARKARGAGFSIAAFGTPVIIRSIKRARNIGDALLARGAGD >Mature_203_residues MNSIPLGFYVDKQSVVHSFPALWKFPLLLFFIIGGSIAASTPVHGLILVGIAVVFYVLAKIPLKVAWEQLWPVLPILIML GAFQWWQRGFDFAATTVLTLFSAVMAAMLLTLTTRLEALMNAVERMLQPFARFSLPVETITLAISLTIRLIPLQLATVKE VLDARKARGAGFSIAAFGTPVIIRSIKRARNIGDALLARGAGD
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22204; Mature: 22204
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIPLGFYVDKQSVVHSFPALWKFPLLLFFIIGGSIAASTPVHGLILVGIAVVFYVLAK CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHH IPLKVAWEQLWPVLPILIMLGAFQWWQRGFDFAATTVLTLFSAVMAAMLLTLTTRLEALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAVERMLQPFARFSLPVETITLAISLTIRLIPLQLATVKEVLDARKARGAGFSIAAFGTP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VIIRSIKRARNIGDALLARGAGD HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNSIPLGFYVDKQSVVHSFPALWKFPLLLFFIIGGSIAASTPVHGLILVGIAVVFYVLAK CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHH IPLKVAWEQLWPVLPILIMLGAFQWWQRGFDFAATTVLTLFSAVMAAMLLTLTTRLEALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NAVERMLQPFARFSLPVETITLAISLTIRLIPLQLATVKEVLDARKARGAGFSIAAFGTP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VIIRSIKRARNIGDALLARGAGD HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA