| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yhgE [H]
Identifier: 145295760
GI number: 145295760
Start: 1877158
End: 1879017
Strand: Reverse
Name: yhgE [H]
Synonym: cgR_1686
Alternate gene names: 145295760
Gene position: 1879017-1877158 (Counterclockwise)
Preceding gene: 145295761
Following gene: 145295759
Centisome position: 56.7
GC content: 57.74
Gene sequence:
>1860_bases ATGGCATTTTTACACTTTGGCTCAGAACTGAAACGATTTGGCCGCGGAAAACTCCCACCATTGGGGTTTGTTGTGGTCAT GTTGCTGCCGTTGCTTTTCGGCGGCGTCTTTGTTTCTGCCTACTATGACCCCATCGGTGGCTTGTCCAAGCTTCCCGTGG CCGTGGTCAATCAGGACGAAGGTGAACTCGATGCCGGCGCCCAGGTGGTGGAGAACCTCCTGGAGCAAGACAACATCAAA TTCATTGAAGTCAGCGCCGAGGAAGCCCGCGAGGGAATCAACGACGGCACCTACTACTTCGGCATTGAAATTCCGAAGAA CTTCAGCGATTCCATTGCCAGCGTGACCAGCGATTCACCAGCGCCAGCAACCGTCAACGCGGTCTTTAACAACAGCAACG GCTTCATTGCCTCCATGCTGGGCAACCAGGTGGTCAACACTGTTGTGGAGACCATGGACACGGAATTCGGCGTCCGCATT GTGGATAACATGCTCGTCGGTTTCTCCACCTTGGGCGACGGCATGAACCAAGCCGCCGAAGGTGCCACCACGCTCAGCGA CGGCGTCGGTTCTGCCAACGACGGCGCAGTTCAGCTTGCTGACGGCGCGGTCACCCTGCGCGACGGCATCGCAAGTGCCA ATGAGGGTGCGCAATCGCTTGCCGACGGCGCCAGCCAGCTCGACACCGGCCTCGGTTCCGCGGCTACAGGCAGCCAAACG CTTGCCGATGGCCTATCCAGCCTGTCTGCGGGCACCGCCCAACTAGGCCAAGGCGCAACCCAGGTTTCAGATGGCGTGGG CCAGCTTGTCGACCAAGTAGCACCGCTTACCGCCCTTGTCCCAGATATCAACTCCCAGCTGATCACCCTGCGCGACGGCG CAGCCACCATTGCCTCTGAATTGTCTGATCCTTCCAGTACCTACCGCTCTGGTGTGGACTCCGCTGTGAGCGCATCCCAG CAACTAGCAGCCGGCCTGCAAACCCTGAAAGACGGATCCAGCCAACTCAGCATTGGTGCGCGCACCCTCGCTGATGGCAC CAGCCAATTGGCCGCAGGTTCAGAACAGCTAGTTGTTGGCGCACAAGCACTGCGCGACGGCACCGTCCAGCTTGATGAAG GCTCCAGCGAACTCGCCCTCAAACTCACCGACGGCGCAAGCCAAGTACCAACCTTCGCTGACGGCGCAGACACCACCATC GCAACCCCAGTTGAAACAGAACAAGCAGGAGACACCACACCGCTCTTCGGTATTGGTCTCGCACCATTCTTCATGGCTGT CGGCCTGTTCATGGGAGCAACCGTTGCCTGGATGATCCTGCACCCAATCAGTCGCCGCGCACTTGACTCCCGCATGGGAG GCTTCCGAGGCACCCTGGCAAGCTACCTTCCAGCAACAGTCTTAGGCCTTGGCCAAGCAACCATCATGTGGGCAGTACTG TACTTCCTGCTCGACCTCAATCCAGCTCACCCAGCTGGACTTTGGATGGCGATGGTCGCCATCTCATGGGTATTCATCTC CATTACCCATATGTTCAACAATGTGGCAGGACCCTCCGCAGGTCGTGTGCTGTCCATCGTGATGATGGCCTTCCAACTGG TCTCCTCCGGTGGCCTATACCCACCAGAAACCCAGCCAGCATTCTTCCACTGGTTCCACACCTACGACCCGATCACCTAC GCAGTCAACCTCATGCGTCAAATGATCTTCAACGACACCCCATCCAATGACCCACGCTTCATGCAAGCAATCTGGGTACT GCTCTTCATCTGGGCACTGATGCTCGCCATCTCCACCCTGGCGAATAGAACAAACAAGGTTCTTCGCATGAAGGACTACC ACCCAGAACTGAAGGTCTAA
Upstream 100 bases:
>100_bases AAGGTGTTGCAGAGGATCTCCCTGTGGTCGTGGTATCAACCAACCCAGACTTTGATTCCTTGGCTGATACCGCTTTGACC ATTACGGGGGCTGGAAACTA
Downstream 100 bases:
>100_bases AAGCTTTTCCCGCCCGGTTCAATAGCGTTAATGGCAGAATCAAACGCTATGGACCGGGCACAAATCTCTGCACTGCTAGA TAGAGCACAGCACACAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFB [H]
Number of amino acids: Translated: 619; Mature: 618
Protein sequence:
>619_residues MAFLHFGSELKRFGRGKLPPLGFVVVMLLPLLFGGVFVSAYYDPIGGLSKLPVAVVNQDEGELDAGAQVVENLLEQDNIK FIEVSAEEAREGINDGTYYFGIEIPKNFSDSIASVTSDSPAPATVNAVFNNSNGFIASMLGNQVVNTVVETMDTEFGVRI VDNMLVGFSTLGDGMNQAAEGATTLSDGVGSANDGAVQLADGAVTLRDGIASANEGAQSLADGASQLDTGLGSAATGSQT LADGLSSLSAGTAQLGQGATQVSDGVGQLVDQVAPLTALVPDINSQLITLRDGAATIASELSDPSSTYRSGVDSAVSASQ QLAAGLQTLKDGSSQLSIGARTLADGTSQLAAGSEQLVVGAQALRDGTVQLDEGSSELALKLTDGASQVPTFADGADTTI ATPVETEQAGDTTPLFGIGLAPFFMAVGLFMGATVAWMILHPISRRALDSRMGGFRGTLASYLPATVLGLGQATIMWAVL YFLLDLNPAHPAGLWMAMVAISWVFISITHMFNNVAGPSAGRVLSIVMMAFQLVSSGGLYPPETQPAFFHWFHTYDPITY AVNLMRQMIFNDTPSNDPRFMQAIWVLLFIWALMLAISTLANRTNKVLRMKDYHPELKV
Sequences:
>Translated_619_residues MAFLHFGSELKRFGRGKLPPLGFVVVMLLPLLFGGVFVSAYYDPIGGLSKLPVAVVNQDEGELDAGAQVVENLLEQDNIK FIEVSAEEAREGINDGTYYFGIEIPKNFSDSIASVTSDSPAPATVNAVFNNSNGFIASMLGNQVVNTVVETMDTEFGVRI VDNMLVGFSTLGDGMNQAAEGATTLSDGVGSANDGAVQLADGAVTLRDGIASANEGAQSLADGASQLDTGLGSAATGSQT LADGLSSLSAGTAQLGQGATQVSDGVGQLVDQVAPLTALVPDINSQLITLRDGAATIASELSDPSSTYRSGVDSAVSASQ QLAAGLQTLKDGSSQLSIGARTLADGTSQLAAGSEQLVVGAQALRDGTVQLDEGSSELALKLTDGASQVPTFADGADTTI ATPVETEQAGDTTPLFGIGLAPFFMAVGLFMGATVAWMILHPISRRALDSRMGGFRGTLASYLPATVLGLGQATIMWAVL YFLLDLNPAHPAGLWMAMVAISWVFISITHMFNNVAGPSAGRVLSIVMMAFQLVSSGGLYPPETQPAFFHWFHTYDPITY AVNLMRQMIFNDTPSNDPRFMQAIWVLLFIWALMLAISTLANRTNKVLRMKDYHPELKV >Mature_618_residues AFLHFGSELKRFGRGKLPPLGFVVVMLLPLLFGGVFVSAYYDPIGGLSKLPVAVVNQDEGELDAGAQVVENLLEQDNIKF IEVSAEEAREGINDGTYYFGIEIPKNFSDSIASVTSDSPAPATVNAVFNNSNGFIASMLGNQVVNTVVETMDTEFGVRIV DNMLVGFSTLGDGMNQAAEGATTLSDGVGSANDGAVQLADGAVTLRDGIASANEGAQSLADGASQLDTGLGSAATGSQTL ADGLSSLSAGTAQLGQGATQVSDGVGQLVDQVAPLTALVPDINSQLITLRDGAATIASELSDPSSTYRSGVDSAVSASQQ LAAGLQTLKDGSSQLSIGARTLADGTSQLAAGSEQLVVGAQALRDGTVQLDEGSSELALKLTDGASQVPTFADGADTTIA TPVETEQAGDTTPLFGIGLAPFFMAVGLFMGATVAWMILHPISRRALDSRMGGFRGTLASYLPATVLGLGQATIMWAVLY FLLDLNPAHPAGLWMAMVAISWVFISITHMFNNVAGPSAGRVLSIVMMAFQLVSSGGLYPPETQPAFFHWFHTYDPITYA VNLMRQMIFNDTPSNDPRFMQAIWVLLFIWALMLAISTLANRTNKVLRMKDYHPELKV
Specific function: Unknown
COG id: COG1511
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To L.lactis phage infection protein (PIP) [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013525 - InterPro: IPR022703 - InterPro: IPR017501 - InterPro: IPR017500 [H]
Pfam domain/function: PF01061 ABC2_membrane; PF12051 DUF3533 [H]
EC number: NA
Molecular weight: Translated: 64900; Mature: 64769
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFLHFGSELKRFGRGKLPPLGFVVVMLLPLLFGGVFVSAYYDPIGGLSKLPVAVVNQDE CCEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCC GELDAGAQVVENLLEQDNIKFIEVSAEEAREGINDGTYYFGIEIPKNFSDSIASVTSDSP CCCHHHHHHHHHHHHHCCCEEEEECHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCC APATVNAVFNNSNGFIASMLGNQVVNTVVETMDTEFGVRIVDNMLVGFSTLGDGMNQAAE CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHC GATTLSDGVGSANDGAVQLADGAVTLRDGIASANEGAQSLADGASQLDTGLGSAATGSQT CCCHHHCCCCCCCCCCEEEECCCEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH LADGLSSLSAGTAQLGQGATQVSDGVGQLVDQVAPLTALVPDINSQLITLRDGAATIASE HHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH LSDPSSTYRSGVDSAVSASQQLAAGLQTLKDGSSQLSIGARTLADGTSQLAAGSEQLVVG CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHCCHHHHHCCCCHHEEC AQALRDGTVQLDEGSSELALKLTDGASQVPTFADGADTTIATPVETEQAGDTTPLFGIGL HHHHCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHH APFFMAVGLFMGATVAWMILHPISRRALDSRMGGFRGTLASYLPATVLGLGQATIMWAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHH YFLLDLNPAHPAGLWMAMVAISWVFISITHMFNNVAGPSAGRVLSIVMMAFQLVSSGGLY HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC PPETQPAFFHWFHTYDPITYAVNLMRQMIFNDTPSNDPRFMQAIWVLLFIWALMLAISTL CCCCCCHHEEHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ANRTNKVLRMKDYHPELKV HHHHHHEEEEECCCCCCCC >Mature Secondary Structure AFLHFGSELKRFGRGKLPPLGFVVVMLLPLLFGGVFVSAYYDPIGGLSKLPVAVVNQDE CEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCC GELDAGAQVVENLLEQDNIKFIEVSAEEAREGINDGTYYFGIEIPKNFSDSIASVTSDSP CCCHHHHHHHHHHHHHCCCEEEEECHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCC APATVNAVFNNSNGFIASMLGNQVVNTVVETMDTEFGVRIVDNMLVGFSTLGDGMNQAAE CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHC GATTLSDGVGSANDGAVQLADGAVTLRDGIASANEGAQSLADGASQLDTGLGSAATGSQT CCCHHHCCCCCCCCCCEEEECCCEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH LADGLSSLSAGTAQLGQGATQVSDGVGQLVDQVAPLTALVPDINSQLITLRDGAATIASE HHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH LSDPSSTYRSGVDSAVSASQQLAAGLQTLKDGSSQLSIGARTLADGTSQLAAGSEQLVVG CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHCCHHHHHCCCCHHEEC AQALRDGTVQLDEGSSELALKLTDGASQVPTFADGADTTIATPVETEQAGDTTPLFGIGL HHHHCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHH APFFMAVGLFMGATVAWMILHPISRRALDSRMGGFRGTLASYLPATVLGLGQATIMWAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHH YFLLDLNPAHPAGLWMAMVAISWVFISITHMFNNVAGPSAGRVLSIVMMAFQLVSSGGLY HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC PPETQPAFFHWFHTYDPITYAVNLMRQMIFNDTPSNDPRFMQAIWVLLFIWALMLAISTL CCCCCCHHEEHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ANRTNKVLRMKDYHPELKV HHHHHHEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 1459957 [H]