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The map label for this gene is nusB [H]

Identifier: 145295740

GI number: 145295740

Start: 1853551

End: 1854189

Strand: Reverse

Name: nusB [H]

Synonym: cgR_1667

Alternate gene names: 145295740

Gene position: 1854189-1853551 (Counterclockwise)

Preceding gene: 145295741

Following gene: 145295735

Centisome position: 55.95

GC content: 55.56

Gene sequence:

>639_bases
GTGAGCGAGCGTCGACAAGATTACAAGCGACACGGATCCCGCTACAAGGCGCGCATGCGTGCCGTAGACATCCTATTTGA
AGCGGAATCCCGCGATGTTGATCCCGTGGCCATCATCGATGACCGCCACAAGTTGGCGCGCGATACCAACCCCATCGTTG
CACCGGTAGCGGAATACACCGAAACCATCATCAATGGCGTTGCCGTTGAACTCGATACCCTCGATGTCTTCCTCGCGGAA
CACATCGCAGAAACCTGGACTCTCGGACGACTCCCATCTGTCGACCGCGCAATCCTGCGCGTCGCCTCCTGGGAAATGAT
CTACAACACCGACGTTCCTGTCACCACCGCAATCGTTGAAGCCGTGGAAATTGCCTCCGAATACTCCGGAGACAAATCCA
GTGCCTACATCAACGCGACACTTGACGCCATGGCATCAAAGGTGGAGACCCTCCGCGAGCGCGCCGCCAACCCAGAAGCA
GTTCTGGCAGAAGCGTCCGAATCTCTCGATGATGCTCCGGTCGCGCCGTGGGATGACTCGGATGAAGATTTTGAGGCTGA
AGAGACTGTAGAGGTTTCCGAAATCGCAGAAGACTCTGAAGTTTCAAAGGTTTCAGAAGAAAAGGCTGACGAGAGCTAA

Upstream 100 bases:

>100_bases
CGATGGTTCCTACCTCTCCCGCGTTAACAACTAAGATTCTTAAAACTTTTAAGAATCAGCCAGAAACATTTTGATTGAAC
AGGAACAAAGAGAACAAAAC

Downstream 100 bases:

>100_bases
ATCTTTTCTGGCTAACACCAAGCGCCACCCACCCTGGAGAAATTTAGGGGTGGGTGGCGCTTCGTTGTGAGAGGGGACCA
GCCAGGTGTGACAAGATTCT

Product: transcription antitermination protein NusB

Products: NA

Alternate protein names: Protein nusB [H]

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSERRQDYKRHGSRYKARMRAVDILFEAESRDVDPVAIIDDRHKLARDTNPIVAPVAEYTETIINGVAVELDTLDVFLAE
HIAETWTLGRLPSVDRAILRVASWEMIYNTDVPVTTAIVEAVEIASEYSGDKSSAYINATLDAMASKVETLRERAANPEA
VLAEASESLDDAPVAPWDDSDEDFEAEETVEVSEIAEDSEVSKVSEEKADES

Sequences:

>Translated_212_residues
MSERRQDYKRHGSRYKARMRAVDILFEAESRDVDPVAIIDDRHKLARDTNPIVAPVAEYTETIINGVAVELDTLDVFLAE
HIAETWTLGRLPSVDRAILRVASWEMIYNTDVPVTTAIVEAVEIASEYSGDKSSAYINATLDAMASKVETLRERAANPEA
VLAEASESLDDAPVAPWDDSDEDFEAEETVEVSEIAEDSEVSKVSEEKADES
>Mature_211_residues
SERRQDYKRHGSRYKARMRAVDILFEAESRDVDPVAIIDDRHKLARDTNPIVAPVAEYTETIINGVAVELDTLDVFLAEH
IAETWTLGRLPSVDRAILRVASWEMIYNTDVPVTTAIVEAVEIASEYSGDKSSAYINATLDAMASKVETLRERAANPEAV
LAEASESLDDAPVAPWDDSDEDFEAEETVEVSEIAEDSEVSKVSEEKADES

Specific function: Involved in the transcription termination process [H]

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family [H]

Homologues:

None

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011605
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 23506; Mature: 23375

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERRQDYKRHGSRYKARMRAVDILFEAESRDVDPVAIIDDRHKLARDTNPIVAPVAEYT
CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCHHHHCCCCCCCHHHHHHH
ETIINGVAVELDTLDVFLAEHIAETWTLGRLPSVDRAILRVASWEMIYNTDVPVTTAIVE
HHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHH
AVEIASEYSGDKSSAYINATLDAMASKVETLRERAANPEAVLAEASESLDDAPVAPWDDS
HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
DEDFEAEETVEVSEIAEDSEVSKVSEEKADES
CCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SERRQDYKRHGSRYKARMRAVDILFEAESRDVDPVAIIDDRHKLARDTNPIVAPVAEYT
CHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCHHHHCCCCCCCHHHHHHH
ETIINGVAVELDTLDVFLAEHIAETWTLGRLPSVDRAILRVASWEMIYNTDVPVTTAIVE
HHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHH
AVEIASEYSGDKSSAYINATLDAMASKVETLRERAANPEAVLAEASESLDDAPVAPWDDS
HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
DEDFEAEETVEVSEIAEDSEVSKVSEEKADES
CCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]