| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is gmk
Identifier: 145295728
GI number: 145295728
Start: 1840569
End: 1841141
Strand: Reverse
Name: gmk
Synonym: cgR_1655
Alternate gene names: 145295728
Gene position: 1841141-1840569 (Counterclockwise)
Preceding gene: 145295729
Following gene: 145295727
Centisome position: 55.55
GC content: 52.18
Gene sequence:
>573_bases GTGTCGGGCGATAACCAACTAGGACGGCTCGTAATTCTTGCGGGCCCCTCAGCGGTCGGTAAATCGACTGTGGTTGATCG CCTCCGCAATGACGTTCCAAACCTGTATTTCAGTGTGTCGATGACCACTAGGGCACCTCGTCCTGGTGAAGTCGATGGAC GTGACTATTTCTATGTCACTGCACAGGAATTTCAGGACAAAATCGACTGTGGAGAGATGCTTGAATGGGCAGATATCCAC GGCGGTTTGCAGCGTTCAGGCACTCCAGCAGGTCCCGTCAATGAGGCTCGCCAAAATGGTCGGCCAGTATTGGTTGAGGT TGATCTTGCAGGAGCCCGAAACATCGCTAGCTTAATTCCAGATGCAGAAACCATCTTCCTTGCTCCACCTTCATGGGAAG TTTTGGTTGAACGCCTCACTGGACGTGGCACCGAAAGCGAAGACGTTATTGCTCGCAGGCTCGAGACCGCACGCGAAGAA TTGGCTGCTCAGAGCGAATTTAAGCACGTCATTATCAATGATGATGTGGATACAGCCGTCAAGGCTATTGAGGATGTTCT CCTCGGCGCTTAG
Upstream 100 bases:
>100_bases GACGAGCTGGGCATTGCTCAGACCCGTCGTCTTCGTGGACTGGGTGACCGTCAGCGTCGCGCACTTCTCGAGCGTTTCGG CTTCGAGGATTAATTCTTCA
Downstream 100 bases:
>100_bases CCAAAACATAGAGCGGTAGGGTATGCTTTTCCGATTGAGCAACCTTTCCCGCTCTTAACACTACTGTCCATATACTTTTG AAAAGGTGTCAGTGACCAAC
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSGDNQLGRLVILAGPSAVGKSTVVDRLRNDVPNLYFSVSMTTRAPRPGEVDGRDYFYVTAQEFQDKIDCGEMLEWADIH GGLQRSGTPAGPVNEARQNGRPVLVEVDLAGARNIASLIPDAETIFLAPPSWEVLVERLTGRGTESEDVIARRLETAREE LAAQSEFKHVIINDDVDTAVKAIEDVLLGA
Sequences:
>Translated_190_residues MSGDNQLGRLVILAGPSAVGKSTVVDRLRNDVPNLYFSVSMTTRAPRPGEVDGRDYFYVTAQEFQDKIDCGEMLEWADIH GGLQRSGTPAGPVNEARQNGRPVLVEVDLAGARNIASLIPDAETIFLAPPSWEVLVERLTGRGTESEDVIARRLETAREE LAAQSEFKHVIINDDVDTAVKAIEDVLLGA >Mature_189_residues SGDNQLGRLVILAGPSAVGKSTVVDRLRNDVPNLYFSVSMTTRAPRPGEVDGRDYFYVTAQEFQDKIDCGEMLEWADIHG GLQRSGTPAGPVNEARQNGRPVLVEVDLAGARNIASLIPDAETIFLAPPSWEVLVERLTGRGTESEDVIARRLETAREEL AAQSEFKHVIINDDVDTAVKAIEDVLLGA
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874833, Length=185, Percent_Identity=39.4594594594595, Blast_Score=122, Evalue=1e-28, Organism=Homo sapiens, GI4504221, Length=185, Percent_Identity=39.4594594594595, Blast_Score=122, Evalue=1e-28, Organism=Homo sapiens, GI226874831, Length=185, Percent_Identity=39.4594594594595, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI38570142, Length=180, Percent_Identity=30.5555555555556, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1790080, Length=183, Percent_Identity=39.344262295082, Blast_Score=130, Evalue=4e-32, Organism=Caenorhabditis elegans, GI193203132, Length=184, Percent_Identity=38.5869565217391, Blast_Score=129, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17508835, Length=184, Percent_Identity=38.5869565217391, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320662, Length=188, Percent_Identity=39.3617021276596, Blast_Score=144, Evalue=8e-36, Organism=Drosophila melanogaster, GI21356141, Length=184, Percent_Identity=34.2391304347826, Blast_Score=102, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_CORGL (Q8NQ42)
Other databases:
- EMBL: AB083048 - EMBL: BA000036 - EMBL: BX927152 - RefSeq: NP_600820.2 - RefSeq: YP_225891.1 - ProteinModelPortal: Q8NQ42 - SMR: Q8NQ42 - GeneID: 1019574 - GeneID: 3343588 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg1810 - KEGG: cgl:NCgl1544 - HOGENOM: HBG671982 - OMA: EWAEFAG - PhylomeDB: Q8NQ42 - ProtClustDB: PRK00300 - BioCyc: CGLU196627:CG1810-MONOMER - BRENDA: 2.7.4.8 - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 20657; Mature: 20526
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDNQLGRLVILAGPSAVGKSTVVDRLRNDVPNLYFSVSMTTRAPRPGEVDGRDYFYVT CCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEEEE AQEFQDKIDCGEMLEWADIHGGLQRSGTPAGPVNEARQNGRPVLVEVDLAGARNIASLIP HHHHHCCCCHHHHHHHHHHHCCHHCCCCCCCCCHHHHHCCCCEEEEEECCCCHHHHHHCC DAETIFLAPPSWEVLVERLTGRGTESEDVIARRLETAREELAAQSEFKHVIINDDVDTAV CCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHH KAIEDVLLGA HHHHHHHCCC >Mature Secondary Structure SGDNQLGRLVILAGPSAVGKSTVVDRLRNDVPNLYFSVSMTTRAPRPGEVDGRDYFYVT CCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEEEE AQEFQDKIDCGEMLEWADIHGGLQRSGTPAGPVNEARQNGRPVLVEVDLAGARNIASLIP HHHHHCCCCHHHHHHHHHHHCCHHCCCCCCCCCHHHHHCCCCEEEEEECCCCHHHHHHCC DAETIFLAPPSWEVLVERLTGRGTESEDVIARRLETAREELAAQSEFKHVIINDDVDTAV CCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHH KAIEDVLLGA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12948626