Click here to switch to the map view.

The map label for this gene is acnR [H]

Identifier: 145295672

GI number: 145295672

Start: 1772361

End: 1772927

Strand: Direct

Name: acnR [H]

Synonym: cgR_1599

Alternate gene names: 145295672

Gene position: 1772361-1772927 (Clockwise)

Preceding gene: 145295671

Following gene: 145295673

Centisome position: 53.48

GC content: 55.2

Gene sequence:

>567_bases
GTGTCCGTAGCGGCAGGCGACAAACCAACAAATAGCCGTCAAGAGATCCTCGAAGGTGCCCGACGGTGCTTCGCTGAGCA
CGGCTATGAAGGCGCAACCGTACGCCGACTGGAAGAAGCAACAGGTAAATCACGCGGAGCGATCTTTCATCACTTCGGTG
ACAAAGAAAACCTGTTCCTAGCCCTCGCGCGGGAAGATGCAGCCCGCATGGCGGAGGTGGTGTCTGAAAATGGCCTCGTT
GAAGTGATGCGAGGAATGCTGGAAGATCCTGAACGATATGACTGGATGTCAGTACGCCTGGAGATCTCCAAGCAGCTGCG
CACCGACCCGGTATTCCGCGCAAAATGGATTGATCACCAAAGTGTTCTAGACGAAGCTGTCCGCGTGCGTTTGTCCCGCA
ATGTGGATAAGGGACAAATGCGCACTGACGTCCCGATCGAAGTGCTGCACACCTTCTTAGAGACTGTTCTCGACGGTTTC
ATCTCCCGTCTTGCCACCGGCGCAACCACAGAAGGGCTGTCCGAAGTATTGGATCTGGTCGAGGGAACTGTCCGTAAACG
CGACTAA

Upstream 100 bases:

>100_bases
TTCATGGCCAATGTGGTGGGGTCCTTTCTAATACGCCAAATTTTCCAAACCCATCCTCTTCCATGCGTGTTTTCACCGCT
ATTTTCCATAGGAGTACATC

Downstream 100 bases:

>100_bases
ACGACCCCTGATTCACACTTTCAGACTACAAGAACTAGACTAAGCGGTATGGTTTCAGTTCTTTTAGTTCAGCCCCGTCA
GGGAGAAGCAGTCGCCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSVAAGDKPTNSRQEILEGARRCFAEHGYEGATVRRLEEATGKSRGAIFHHFGDKENLFLALAREDAARMAEVVSENGLV
EVMRGMLEDPERYDWMSVRLEISKQLRTDPVFRAKWIDHQSVLDEAVRVRLSRNVDKGQMRTDVPIEVLHTFLETVLDGF
ISRLATGATTEGLSEVLDLVEGTVRKRD

Sequences:

>Translated_188_residues
MSVAAGDKPTNSRQEILEGARRCFAEHGYEGATVRRLEEATGKSRGAIFHHFGDKENLFLALAREDAARMAEVVSENGLV
EVMRGMLEDPERYDWMSVRLEISKQLRTDPVFRAKWIDHQSVLDEAVRVRLSRNVDKGQMRTDVPIEVLHTFLETVLDGF
ISRLATGATTEGLSEVLDLVEGTVRKRD
>Mature_187_residues
SVAAGDKPTNSRQEILEGARRCFAEHGYEGATVRRLEEATGKSRGAIFHHFGDKENLFLALAREDAARMAEVVSENGLVE
VMRGMLEDPERYDWMSVRLEISKQLRTDPVFRAKWIDHQSVLDEAVRVRLSRNVDKGQMRTDVPIEVLHTFLETVLDGFI
SRLATGATTEGLSEVLDLVEGTVRKRD

Specific function: Represses the aconitase gene acn [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21199; Mature: 21068

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAAGDKPTNSRQEILEGARRCFAEHGYEGATVRRLEEATGKSRGAIFHHFGDKENLFL
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCEEE
ALAREDAARMAEVVSENGLVEVMRGMLEDPERYDWMSVRLEISKQLRTDPVFRAKWIDHQ
EEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCHH
SVLDEAVRVRLSRNVDKGQMRTDVPIEVLHTFLETVLDGFISRLATGATTEGLSEVLDLV
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
EGTVRKRD
HHHHHCCC
>Mature Secondary Structure 
SVAAGDKPTNSRQEILEGARRCFAEHGYEGATVRRLEEATGKSRGAIFHHFGDKENLFL
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCEEE
ALAREDAARMAEVVSENGLVEVMRGMLEDPERYDWMSVRLEISKQLRTDPVFRAKWIDHQ
EEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCHH
SVLDEAVRVRLSRNVDKGQMRTDVPIEVLHTFLETVLDGFISRLATGATTEGLSEVLDLV
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
EGTVRKRD
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]