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The map label for this gene is ydjZ [C]

Identifier: 145295662

GI number: 145295662

Start: 1759594

End: 1760358

Strand: Direct

Name: ydjZ [C]

Synonym: cgR_1589

Alternate gene names: 145295662

Gene position: 1759594-1760358 (Clockwise)

Preceding gene: 145295658

Following gene: 145295663

Centisome position: 53.09

GC content: 49.93

Gene sequence:

>765_bases
ATGCATGACAAAGGTGAGACCCAGGAGAATCCTGCGGACACGTCAGGACGCCTAAACACACCAATTTCCACGGTCTTTCA
CTTCTTTAGCTCACTTTTCCATGACGCTCTGCGCAGTGTTGCCCAGTGGAGTGCGTGGAAGAAAATCGCTGTATCGGTTG
TCATCGTCGCAATTATTTCCGTAACTTTTCTTGTCAATGTCCCCCCGATTTCGGTTTATCGTGACTGGGCAAACAACGCC
GGCGACGCTTTTGTCTTAGTTTTTTGCGCCTTTTATATCCTCATTACTCAGTTCCCTATCCCCCGCACAGTTCTCACACT
GGCCTCCGGCGTGCTGTTCGGGCCGGTTCTTGGATCATTCGTGGCGCTGGGTTCCACCACAGTGTCAGCGGTAATCTCGC
TCCTCATTGTTCGGGGTCTGCTTGGCGATTGGATGGCGCCACGTTTAACGCACCCCGCAGTCTCACGCATCAATAACCGA
CTTGAGCAACGTGGATGGCTGGCGATTACTTCTTTAAGAATGATCGCCGCTATCCCCTTTTCGATCCTCAACTATGTTGC
AGCCTTGACTAGCGTTCCTGTTTTTTCTTTTGCCATCGCTACCTTGATCGGATCTGCACCAGGAACCATCATCACCGTCG
TTTTGGGAGATGCAGTCACAGGTTCTGGAAACTGGACTGCCGTTGCATTCACGATATTTTTAGCGATTTTGGGTGTTTTA
GGTATCTTTTTAGATCAAAAGATGCCAGTCAAGCCTGGAAAGTAG

Upstream 100 bases:

>100_bases
ATCGGCACTAGCTACTACCACGATAACGAGTACTTTGTTTCAATACATTCAAAATGGCGGAATATTTTGATCCCGGGGGT
GCAACTGTATGGTGTTTTCT

Downstream 100 bases:

>100_bases
ACAACATGAGGTAGGGTTGGAGAAGATGCTTTACTTCTTCACTCATTCGCCCTGACGGCGAATCCACTACAATTAACAAA
GGGGGCAGCCACCCATGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MHDKGETQENPADTSGRLNTPISTVFHFFSSLFHDALRSVAQWSAWKKIAVSVVIVAIISVTFLVNVPPISVYRDWANNA
GDAFVLVFCAFYILITQFPIPRTVLTLASGVLFGPVLGSFVALGSTTVSAVISLLIVRGLLGDWMAPRLTHPAVSRINNR
LEQRGWLAITSLRMIAAIPFSILNYVAALTSVPVFSFAIATLIGSAPGTIITVVLGDAVTGSGNWTAVAFTIFLAILGVL
GIFLDQKMPVKPGK

Sequences:

>Translated_254_residues
MHDKGETQENPADTSGRLNTPISTVFHFFSSLFHDALRSVAQWSAWKKIAVSVVIVAIISVTFLVNVPPISVYRDWANNA
GDAFVLVFCAFYILITQFPIPRTVLTLASGVLFGPVLGSFVALGSTTVSAVISLLIVRGLLGDWMAPRLTHPAVSRINNR
LEQRGWLAITSLRMIAAIPFSILNYVAALTSVPVFSFAIATLIGSAPGTIITVVLGDAVTGSGNWTAVAFTIFLAILGVL
GIFLDQKMPVKPGK
>Mature_254_residues
MHDKGETQENPADTSGRLNTPISTVFHFFSSLFHDALRSVAQWSAWKKIAVSVVIVAIISVTFLVNVPPISVYRDWANNA
GDAFVLVFCAFYILITQFPIPRTVLTLASGVLFGPVLGSFVALGSTTVSAVISLLIVRGLLGDWMAPRLTHPAVSRINNR
LEQRGWLAITSLRMIAAIPFSILNYVAALTSVPVFSFAIATLIGSAPGTIITVVLGDAVTGSGNWTAVAFTIFLAILGVL
GIFLDQKMPVKPGK

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 27198; Mature: 27198

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS01159 WW_DOMAIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDKGETQENPADTSGRLNTPISTVFHFFSSLFHDALRSVAQWSAWKKIAVSVVIVAIIS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTFLVNVPPISVYRDWANNAGDAFVLVFCAFYILITQFPIPRTVLTLASGVLFGPVLGSF
HHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VALGSTTVSAVISLLIVRGLLGDWMAPRLTHPAVSRINNRLEQRGWLAITSLRMIAAIPF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SILNYVAALTSVPVFSFAIATLIGSAPGTIITVVLGDAVTGSGNWTAVAFTIFLAILGVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHHHHHH
GIFLDQKMPVKPGK
HHHHCCCCCCCCCC
>Mature Secondary Structure
MHDKGETQENPADTSGRLNTPISTVFHFFSSLFHDALRSVAQWSAWKKIAVSVVIVAIIS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTFLVNVPPISVYRDWANNAGDAFVLVFCAFYILITQFPIPRTVLTLASGVLFGPVLGSF
HHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VALGSTTVSAVISLLIVRGLLGDWMAPRLTHPAVSRINNRLEQRGWLAITSLRMIAAIPF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SILNYVAALTSVPVFSFAIATLIGSAPGTIITVVLGDAVTGSGNWTAVAFTIFLAILGVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHHHHHH
GIFLDQKMPVKPGK
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]