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The map label for this gene is pup

Identifier: 145295628

GI number: 145295628

Start: 1719440

End: 1719634

Strand: Reverse

Name: pup

Synonym: cgR_1555

Alternate gene names: 145295628

Gene position: 1719634-1719440 (Counterclockwise)

Preceding gene: 145295629

Following gene: 145295627

Centisome position: 51.89

GC content: 52.31

Gene sequence:

>195_bases
GTGAACGCAAAGCAAACTCAAATTATGGGTGGCGGCGGACGTGACGAGGACAACGCCGAGGATTCCGCACAGGCATCTGG
ACAGGTTCAGATCAACACCGAAGGTGTGGACAGCTTGCTGGATGAAATCGACGGACTGTTGGAAAACAACGCCGAGGAAT
TCGTTCGTTCCTATGTACAAAAGGGTGGCGAATAG

Upstream 100 bases:

>100_bases
CTAAAAGACTGGGCTTAAACAACCAGGCTTAAATGGCCAGGTCTAAATACGTGGGCTGAAGAACTAAGAAATACCGATTT
ACGGCAGGAGAGTGAGTGTA

Downstream 100 bases:

>100_bases
TCACTGTGAGTACCGTGGAATCCGCATTGACCCGCAGGATCATGGGCATTGAAACGGAGTATGGCCTCACCTTTGTTGAT
GGTGATTCCAAAAAGCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Bacterial ubiquitin-like modifier

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MNAKQTQIMGGGGRDEDNAEDSAQASGQVQINTEGVDSLLDEIDGLLENNAEEFVRSYVQKGGE

Sequences:

>Translated_64_residues
MNAKQTQIMGGGGRDEDNAEDSAQASGQVQINTEGVDSLLDEIDGLLENNAEEFVRSYVQKGGE
>Mature_64_residues
MNAKQTQIMGGGGRDEDNAEDSAQASGQVQINTEGVDSLLDEIDGLLENNAEEFVRSYVQKGGE

Specific function: Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic ubiquitin-like protein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PUP_CORGB (A4QE81)

Other databases:

- EMBL:   AP009044
- RefSeq:   YP_001138449.1
- STRING:   A4QE81
- GeneID:   4993239
- GenomeReviews:   AP009044_GR
- KEGG:   cgt:cgR_1555
- HOGENOM:   HBG700099
- OMA:   NTEGVDD
- ProtClustDB:   CLSK2518720
- HAMAP:   MF_02106
- InterPro:   IPR008515
- TIGRFAMs:   TIGR03687

Pfam domain/function: PF05639 DUF797

EC number: NA

Molecular weight: Translated: 6830; Mature: 6830

Theoretical pI: Translated: 3.68; Mature: 3.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKQTQIMGGGGRDEDNAEDSAQASGQVQINTEGVDSLLDEIDGLLENNAEEFVRSYVQ
CCCCCCCEECCCCCCCCCCCCHHCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHH
KGGE
CCCC
>Mature Secondary Structure
MNAKQTQIMGGGGRDEDNAEDSAQASGQVQINTEGVDSLLDEIDGLLENNAEEFVRSYVQ
CCCCCCCEECCCCCCCCCCCCHHCCCCCEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHH
KGGE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA