| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yhjE [H]
Identifier: 145295601
GI number: 145295601
Start: 1690635
End: 1692023
Strand: Reverse
Name: yhjE [H]
Synonym: cgR_1528
Alternate gene names: 145295601
Gene position: 1692023-1690635 (Counterclockwise)
Preceding gene: 145295602
Following gene: 145295599
Centisome position: 51.05
GC content: 54.0
Gene sequence:
>1389_bases GTGACCACAACTGATCACTCCACGGAGTTGAATCCTTCTGATCCAGATGGGCAGACGGCAACCCTAGTGATTGACAAGAA AACTAAACGTCGAGTTGCAGCAGCCTCCACCATCGGCACAACCATCGAGTTCTACGATTTTTATGCGTACGCTGCGGCAG CTGTCGTTGTTTTCCCAAGTCTGTTTTTCCCTGCCAATGACAACCCAACCGTGAACCTGTTGGCATCGTTTGCCACCTTT GGTCTTGCGTTCGTTGCTCGTCCACTCGGTTCAATCATTTTCGGGCACTTCGGTGACCGTGTGGGACGCAAAGCTACCTT GATCGGTTCACTGCTGACCATGGGCATTGCCACCATCTTGATCGGCCTGCTGCCTACTTATGGTCAGGTCGGAATCATTG CACCTGCGCTGTTGGCGCTCATGCGTTTCTGCCAGGGCCTGGGCCTTGGCGGTGAATGGTCTGGCGCTGCGTTGCTGGCT GGTGAAAACGCGGAAAACACTCACCGCGCTCGTGCTGCAATGTGGCCACAGCTGGGTGCACCGTTTGGTTTCTTCTTGGC CAATGGTTTCATGCTCATTCTGGTCGGTGTGCTTGCCCATCAGGACGGCGATCTTCACGGCGCGTTCATGACCTGGGGTT GGCGTCTGCCATTCCTGTCTTCGGCGATCATGATCGCAGTTGGCCTGTGGGTGCGTTTCTCACTGGAGGAAACTCCAGTG TTCAAGCAGGCTGTTGATCAGGGCAAGAAAGTGAAGTCTCCGCTCAAGGAGCTGTTCAAGACTTCCCCTGGCCCTGTTGT GCAGGCTACTTTGATCATGCTGTCCACTTATACCTTGTTCTACCTGGTTACCACGTGGATTCTGTCGTATGGCATCGGTA ATCGCAGCACCGGAAACGGCCTGTCTATTCCGTACTTTGAGTTCCTGCAGTTGCAGCTGGCCACCATCGTGTTCTTCGCC ATCATGATCCCTGTGTCAGGCTGGTTGGCTGATGTGTGGGGTCGTAAAAACACCCTGACCTTGGCTTCTGTGCTGCTTCT CGGCTTTGGTCTGACGTTTAATCTGCTTCTCGATCCAGAGACCGCCACCAAGACCACCGTGTTCATCTTCTTGTTCGTGG GCATGAGCATCATGGGTCTGATCTTTGGACCCATGTCGGCAATTTTGCCGGAGCTCTTCCCTACCAACGTCCGCTACACG GGCTCCGGAATCGCCTACAATGTCTCCTCGATCCTCGGTGCAGCTATTGCACCGTTCATCGCAACGTGGCTGGTGTCCGA GTTTTCAGTGGCGTACGTCGGCTATTACCTCATCATCGTCACCGCAATTACCTTTGTTGCGGTGCTGACGATGAAAGAAA ACAAAAACCACGACCTCCGAGAGGTCTAA
Upstream 100 bases:
>100_bases GCGCCTAACATCTCGTTGTATGGGATTGACTCTAATAATCACCTGTGGAAACATCGCAAGGGTAATTATTGGAATCTATT ATTGTGTGAGGCGATAACTC
Downstream 100 bases:
>100_bases AAGATTTTTGCTTATCGACGCCCCCTTCTGTTTCTTGTCGTCAACGCAAATTGCACTGCATTGAGACATCCCAGGCGTAA CAGGGCTTCAATAAGCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MTTTDHSTELNPSDPDGQTATLVIDKKTKRRVAAASTIGTTIEFYDFYAYAAAAVVVFPSLFFPANDNPTVNLLASFATF GLAFVARPLGSIIFGHFGDRVGRKATLIGSLLTMGIATILIGLLPTYGQVGIIAPALLALMRFCQGLGLGGEWSGAALLA GENAENTHRARAAMWPQLGAPFGFFLANGFMLILVGVLAHQDGDLHGAFMTWGWRLPFLSSAIMIAVGLWVRFSLEETPV FKQAVDQGKKVKSPLKELFKTSPGPVVQATLIMLSTYTLFYLVTTWILSYGIGNRSTGNGLSIPYFEFLQLQLATIVFFA IMIPVSGWLADVWGRKNTLTLASVLLLGFGLTFNLLLDPETATKTTVFIFLFVGMSIMGLIFGPMSAILPELFPTNVRYT GSGIAYNVSSILGAAIAPFIATWLVSEFSVAYVGYYLIIVTAITFVAVLTMKENKNHDLREV
Sequences:
>Translated_462_residues MTTTDHSTELNPSDPDGQTATLVIDKKTKRRVAAASTIGTTIEFYDFYAYAAAAVVVFPSLFFPANDNPTVNLLASFATF GLAFVARPLGSIIFGHFGDRVGRKATLIGSLLTMGIATILIGLLPTYGQVGIIAPALLALMRFCQGLGLGGEWSGAALLA GENAENTHRARAAMWPQLGAPFGFFLANGFMLILVGVLAHQDGDLHGAFMTWGWRLPFLSSAIMIAVGLWVRFSLEETPV FKQAVDQGKKVKSPLKELFKTSPGPVVQATLIMLSTYTLFYLVTTWILSYGIGNRSTGNGLSIPYFEFLQLQLATIVFFA IMIPVSGWLADVWGRKNTLTLASVLLLGFGLTFNLLLDPETATKTTVFIFLFVGMSIMGLIFGPMSAILPELFPTNVRYT GSGIAYNVSSILGAAIAPFIATWLVSEFSVAYVGYYLIIVTAITFVAVLTMKENKNHDLREV >Mature_461_residues TTTDHSTELNPSDPDGQTATLVIDKKTKRRVAAASTIGTTIEFYDFYAYAAAAVVVFPSLFFPANDNPTVNLLASFATFG LAFVARPLGSIIFGHFGDRVGRKATLIGSLLTMGIATILIGLLPTYGQVGIIAPALLALMRFCQGLGLGGEWSGAALLAG ENAENTHRARAAMWPQLGAPFGFFLANGFMLILVGVLAHQDGDLHGAFMTWGWRLPFLSSAIMIAVGLWVRFSLEETPVF KQAVDQGKKVKSPLKELFKTSPGPVVQATLIMLSTYTLFYLVTTWILSYGIGNRSTGNGLSIPYFEFLQLQLATIVFFAI MIPVSGWLADVWGRKNTLTLASVLLLGFGLTFNLLLDPETATKTTVFIFLFVGMSIMGLIFGPMSAILPELFPTNVRYTG SGIAYNVSSILGAAIAPFIATWLVSEFSVAYVGYYLIIVTAITFVAVLTMKENKNHDLREV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789941, Length=459, Percent_Identity=49.6732026143791, Blast_Score=372, Evalue=1e-104, Organism=Escherichia coli, GI1788292, Length=460, Percent_Identity=33.695652173913, Blast_Score=235, Evalue=6e-63, Organism=Escherichia coli, GI1790550, Length=458, Percent_Identity=31.2227074235808, Blast_Score=219, Evalue=3e-58, Organism=Escherichia coli, GI1788942, Length=458, Percent_Identity=27.5109170305677, Blast_Score=121, Evalue=7e-29, Organism=Escherichia coli, GI87082404, Length=379, Percent_Identity=24.2744063324538, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 49967; Mature: 49836
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTDHSTELNPSDPDGQTATLVIDKKTKRRVAAASTIGTTIEFYDFYAYAAAAVVVFPS CCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LFFPANDNPTVNLLASFATFGLAFVARPLGSIIFGHFGDRVGRKATLIGSLLTMGIATIL HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IGLLPTYGQVGIIAPALLALMRFCQGLGLGGEWSGAALLAGENAENTHRARAAMWPQLGA HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCC PFGFFLANGFMLILVGVLAHQDGDLHGAFMTWGWRLPFLSSAIMIAVGLWVRFSLEETPV CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCHH FKQAVDQGKKVKSPLKELFKTSPGPVVQATLIMLSTYTLFYLVTTWILSYGIGNRSTGNG HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LSIPYFEFLQLQLATIVFFAIMIPVSGWLADVWGRKNTLTLASVLLLGFGLTFNLLLDPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCC TATKTTVFIFLFVGMSIMGLIFGPMSAILPELFPTNVRYTGSGIAYNVSSILGAAIAPFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEHHHHHHHHHHHHH ATWLVSEFSVAYVGYYLIIVTAITFVAVLTMKENKNHDLREV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TTTDHSTELNPSDPDGQTATLVIDKKTKRRVAAASTIGTTIEFYDFYAYAAAAVVVFPS CCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LFFPANDNPTVNLLASFATFGLAFVARPLGSIIFGHFGDRVGRKATLIGSLLTMGIATIL HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IGLLPTYGQVGIIAPALLALMRFCQGLGLGGEWSGAALLAGENAENTHRARAAMWPQLGA HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCC PFGFFLANGFMLILVGVLAHQDGDLHGAFMTWGWRLPFLSSAIMIAVGLWVRFSLEETPV CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCHH FKQAVDQGKKVKSPLKELFKTSPGPVVQATLIMLSTYTLFYLVTTWILSYGIGNRSTGNG HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LSIPYFEFLQLQLATIVFFAIMIPVSGWLADVWGRKNTLTLASVLLLGFGLTFNLLLDPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCC TATKTTVFIFLFVGMSIMGLIFGPMSAILPELFPTNVRYTGSGIAYNVSSILGAAIAPFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEHHHHHHHHHHHHH ATWLVSEFSVAYVGYYLIIVTAITFVAVLTMKENKNHDLREV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]