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The map label for this gene is yfeT [C]

Identifier: 145295591

GI number: 145295591

Start: 1678854

End: 1679729

Strand: Reverse

Name: yfeT [C]

Synonym: cgR_1518

Alternate gene names: 145295591

Gene position: 1679729-1678854 (Counterclockwise)

Preceding gene: 145295592

Following gene: 145295586

Centisome position: 50.68

GC content: 58.9

Gene sequence:

>876_bases
GTGTCGTGGCACCAAGCAACTGACGCTCCACCAAGGATCCGCATCACCACGCTTGCGCCATCGCTGCAGCCTAATCAGCG
CAAAGTCGCCGAAGTCATGCTTGTCGACGCCCCCAGCATCGTCGAACTGACCGCTCAGGGCCTTGCAGATCGCGTGGGGG
TTGGGCGTGCCACCGTCATCCGCACCGCCCAGTCCTTAGGCTACGACGGATTCCCGCAGCTGCGCGTCGCCCTGGCGCAG
GAACTGGCACTGGCGCAGGACGCGTCGAGAAGCATGGTTGAAGGAGCGTTAAGCTCCTCGTTGCTTGGTCACCTGCAGGC
GGGGATCTCTGATTTTCAAGCGTCGTTGAGCACGGTGGCCTCTGCGTTGACCGAAGATGATCTCACGCGCTGTATTGAGG
GGCTGGATTCTGCGCGCCGGGTACTCGTGGCCTCTCATGGGCTGTCCGCGCCGTTGGGTTTGGATTTTTCGCAGCGTTTG
AACTCGATGGGTCGTTCAGCTGAAGTGCATTCTGATTCCATGTCGGAGCAGATTGTGGCTCGTCAATTAGGTGAAGGTTC
TGTCTGCTTCGCGATTTCTGGTTCAGGTGCCAGCAAAGCAACGCTTGCGACCATCGAAGCAGCACGTGCAGGTGGGGCAA
CCATTATGGCGATGACATGTTTTGCGCATTCCGCCATCGATGTGGCCGCTGATGTGTCCTTGATCGTTCCCCCGATGACA
GCCTCATTCCAAGATGAGCTCACCCGAACGTCACGGGCCGCGCTGATGTTGGTCTCTGAGCAATTAATCGAGCTGCTCAT
CACTCACCGTGGCCAGGAAGCCGCTCAGGCGAGGGCCACATCGATGTCGATGATTGGCACCTCGCTGGAAGAGTAA

Upstream 100 bases:

>100_bases
ACCGTGGGCATGCTGCTCATCGTCGTGGTTGTCGCAACGATGATCGTCGATCTCATCTCCGGCACCATCCGCCGCCGCAT
CATGAAGGGGGCTAGTGACC

Downstream 100 bases:

>100_bases
TCTAGCGGGTCTTTCTCGGCATCGATAGCGCCGCCACCAGCAGGAAGCCCACGGCAAACGCGGCGCAGATGGCAATGTTG
ACCACTACTTGCTGTCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSWHQATDAPPRIRITTLAPSLQPNQRKVAEVMLVDAPSIVELTAQGLADRVGVGRATVIRTAQSLGYDGFPQLRVALAQ
ELALAQDASRSMVEGALSSSLLGHLQAGISDFQASLSTVASALTEDDLTRCIEGLDSARRVLVASHGLSAPLGLDFSQRL
NSMGRSAEVHSDSMSEQIVARQLGEGSVCFAISGSGASKATLATIEAARAGGATIMAMTCFAHSAIDVAADVSLIVPPMT
ASFQDELTRTSRAALMLVSEQLIELLITHRGQEAAQARATSMSMIGTSLEE

Sequences:

>Translated_291_residues
MSWHQATDAPPRIRITTLAPSLQPNQRKVAEVMLVDAPSIVELTAQGLADRVGVGRATVIRTAQSLGYDGFPQLRVALAQ
ELALAQDASRSMVEGALSSSLLGHLQAGISDFQASLSTVASALTEDDLTRCIEGLDSARRVLVASHGLSAPLGLDFSQRL
NSMGRSAEVHSDSMSEQIVARQLGEGSVCFAISGSGASKATLATIEAARAGGATIMAMTCFAHSAIDVAADVSLIVPPMT
ASFQDELTRTSRAALMLVSEQLIELLITHRGQEAAQARATSMSMIGTSLEE
>Mature_290_residues
SWHQATDAPPRIRITTLAPSLQPNQRKVAEVMLVDAPSIVELTAQGLADRVGVGRATVIRTAQSLGYDGFPQLRVALAQE
LALAQDASRSMVEGALSSSLLGHLQAGISDFQASLSTVASALTEDDLTRCIEGLDSARRVLVASHGLSAPLGLDFSQRLN
SMGRSAEVHSDSMSEQIVARQLGEGSVCFAISGSGASKATLATIEAARAGGATIMAMTCFAHSAIDVAADVSLIVPPMTA
SFQDELTRTSRAALMLVSEQLIELLITHRGQEAAQARATSMSMIGTSLEE

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=236, Percent_Identity=27.1186440677966, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87082130, Length=220, Percent_Identity=28.6363636363636, Blast_Score=78, Evalue=8e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 30473; Mature: 30342

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWHQATDAPPRIRITTLAPSLQPNQRKVAEVMLVDAPSIVELTAQGLADRVGVGRATVI
CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHEECCCHHHHHHHHHHHHHHCCCHHHHH
RTAQSLGYDGFPQLRVALAQELALAQDASRSMVEGALSSSLLGHLQAGISDFQASLSTVA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALTEDDLTRCIEGLDSARRVLVASHGLSAPLGLDFSQRLNSMGRSAEVHSDSMSEQIVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHH
RQLGEGSVCFAISGSGASKATLATIEAARAGGATIMAMTCFAHSAIDVAADVSLIVPPMT
HHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCC
ASFQDELTRTSRAALMLVSEQLIELLITHRGQEAAQARATSMSMIGTSLEE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SWHQATDAPPRIRITTLAPSLQPNQRKVAEVMLVDAPSIVELTAQGLADRVGVGRATVI
CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHEECCCHHHHHHHHHHHHHHCCCHHHHH
RTAQSLGYDGFPQLRVALAQELALAQDASRSMVEGALSSSLLGHLQAGISDFQASLSTVA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALTEDDLTRCIEGLDSARRVLVASHGLSAPLGLDFSQRLNSMGRSAEVHSDSMSEQIVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHH
RQLGEGSVCFAISGSGASKATLATIEAARAGGATIMAMTCFAHSAIDVAADVSLIVPPMT
HHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCC
ASFQDELTRTSRAALMLVSEQLIELLITHRGQEAAQARATSMSMIGTSLEE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]