| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yqjI [H]
Identifier: 145295586
GI number: 145295586
Start: 1674666
End: 1676144
Strand: Reverse
Name: yqjI [H]
Synonym: cgR_1513
Alternate gene names: 145295586
Gene position: 1676144-1674666 (Counterclockwise)
Preceding gene: 145295591
Following gene: 145295583
Centisome position: 50.57
GC content: 59.36
Gene sequence:
>1479_bases ATGCCGTCAAGTACGATCAATAACATGACTAATGGAGATAATCTCGCACAGATCGGCGTTGTAGGCCTAGCAGTAATGGG CTCAAACCTCGCCCGCAACTTCGCCCGCAACGGCCACACTGTCGCTGTCTACAACCGCAGCACTGACAAAACCGACAAGC TCATCGCCGATCACGGCTCCGAAGGCAACTTCATCCCTTCCGCAACCGTCGAAGAGTTCGTAGCATCCCTGGAAAAGCCA CGCCGCGCCATCATCATGGTTCAGGCTGGTAACGCCACCGACGCAGTCATCAACCAGCTGGCAGACGCCATGGACGAAGG CGACATCATCATCGACGGCGGCAACGCCCTCTACACCGACACCATTCGTCGCGAGAAGGAAATCTCCGCACGCGGTCTCC ACTTCGTCGGTGCTGGTATCTCTGGCGGCGAAGAAGGCGCACTCAACGGCCCATCCATCATGCCTGGTGGCCCAGCAAAG TCCTACGAGTCCCTCGGACCACTGCTTGAGTCCATCGCTGCCAACGTTGACGGCACCCCATGTGTCACCCACATCGGCCC AGACGGCGCCGGCCACTTCGTCAAGATGGTCCACAACGGCATCGAGTACGCCGACATGCAGGTCATCGGCGAGGCATACC ACCTTCTCCGCTACGCAGCAGGCATGCAGCCAGCTGAAATCGCTGAGGTTTTCAAGGAATGGAACGCAGGCGACCTGGAT TCCTACCTCATCGAGATCACCGCAGAGGTTCTCTCCCAGGTGGATGCTGAAACCGGCAAGCCACTGATCGACGTCATCGT TGACGCTGCAGGCCAGAAGGGCACCGGACGTTGGACCGTCAAGGCTGCTCTTGATCTGGGTATTGCTACCACCGGCATCG GCGAAGCTGTTTTCGCACGTGCACTCTCCGGCGCAACCAGCCAGCGCGCTGCAGCACAGGGCAACCTACCTGCAGGTGTC CTCACCGATCTGGAAGCACTTGGCGTGGACAAGGCACAGTTCGTCGAAGACGTTCGCCGTGCACTGTACGCATCCAAGCT TGTTGCTTACGCACAGGGCTTCGACGAGATCAAGGCTGGCTCCGACGAGAACAACTGGGATGTTGACCCTCGCGACCTCG CTACCATCTGGCGCGGCGGCTGCATCATTCGCGCTAAGTTCCTCAACCGCATCGTCGAAGCATACGATGCAAACGCTGAA CTTGAGTCCCTGCTGCTCGACCCTTACTTCAAGAGCGAGCTCGGCGACCTCATCGATTCATGGCGTCGCGTGATTGTCAC CGCCACCCAGCTTGGCCTGCCAATCCCAGTGTTCGCTTCCTCCCTGTCCTACTACGACAGCCTGCGTGCAGAGCGTCTGC CAGCAGCCCTGATCCAGGGACAGCGCGACTTCTTCGGTGCGCACACCTACAAGCGCATCGACAAGGATGGCTCCTTCCAC ACCGAGTGGTCCGGCGACCGCTCCGAGGTGGAAGCTTAA
Upstream 100 bases:
>100_bases CGGCCTAAAATGGTTGGATTTTCACCTGCTGTGACCTGGTAAAATGGCCACTACCCCCAAATGGTCACACCTTTTAGGCC GATTTTGCTGACACCGGGCT
Downstream 100 bases:
>100_bases AGGCTCCCCCTAAATAGCAAAACGCTAAAACCCCTCACAGTCACCTTAGGTTGTGAGGGGTTTTTCGCGTGCTGCCAGGG ATTCGCCGGAGGTGGGCGTC
Product: 6-phosphogluconate dehydrogenase
Products: NA
Alternate protein names: GNTZII [H]
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MPSSTINNMTNGDNLAQIGVVGLAVMGSNLARNFARNGHTVAVYNRSTDKTDKLIADHGSEGNFIPSATVEEFVASLEKP RRAIIMVQAGNATDAVINQLADAMDEGDIIIDGGNALYTDTIRREKEISARGLHFVGAGISGGEEGALNGPSIMPGGPAK SYESLGPLLESIAANVDGTPCVTHIGPDGAGHFVKMVHNGIEYADMQVIGEAYHLLRYAAGMQPAEIAEVFKEWNAGDLD SYLIEITAEVLSQVDAETGKPLIDVIVDAAGQKGTGRWTVKAALDLGIATTGIGEAVFARALSGATSQRAAAQGNLPAGV LTDLEALGVDKAQFVEDVRRALYASKLVAYAQGFDEIKAGSDENNWDVDPRDLATIWRGGCIIRAKFLNRIVEAYDANAE LESLLLDPYFKSELGDLIDSWRRVIVTATQLGLPIPVFASSLSYYDSLRAERLPAALIQGQRDFFGAHTYKRIDKDGSFH TEWSGDRSEVEA
Sequences:
>Translated_492_residues MPSSTINNMTNGDNLAQIGVVGLAVMGSNLARNFARNGHTVAVYNRSTDKTDKLIADHGSEGNFIPSATVEEFVASLEKP RRAIIMVQAGNATDAVINQLADAMDEGDIIIDGGNALYTDTIRREKEISARGLHFVGAGISGGEEGALNGPSIMPGGPAK SYESLGPLLESIAANVDGTPCVTHIGPDGAGHFVKMVHNGIEYADMQVIGEAYHLLRYAAGMQPAEIAEVFKEWNAGDLD SYLIEITAEVLSQVDAETGKPLIDVIVDAAGQKGTGRWTVKAALDLGIATTGIGEAVFARALSGATSQRAAAQGNLPAGV LTDLEALGVDKAQFVEDVRRALYASKLVAYAQGFDEIKAGSDENNWDVDPRDLATIWRGGCIIRAKFLNRIVEAYDANAE LESLLLDPYFKSELGDLIDSWRRVIVTATQLGLPIPVFASSLSYYDSLRAERLPAALIQGQRDFFGAHTYKRIDKDGSFH TEWSGDRSEVEA >Mature_491_residues PSSTINNMTNGDNLAQIGVVGLAVMGSNLARNFARNGHTVAVYNRSTDKTDKLIADHGSEGNFIPSATVEEFVASLEKPR RAIIMVQAGNATDAVINQLADAMDEGDIIIDGGNALYTDTIRREKEISARGLHFVGAGISGGEEGALNGPSIMPGGPAKS YESLGPLLESIAANVDGTPCVTHIGPDGAGHFVKMVHNGIEYADMQVIGEAYHLLRYAAGMQPAEIAEVFKEWNAGDLDS YLIEITAEVLSQVDAETGKPLIDVIVDAAGQKGTGRWTVKAALDLGIATTGIGEAVFARALSGATSQRAAAQGNLPAGVL TDLEALGVDKAQFVEDVRRALYASKLVAYAQGFDEIKAGSDENNWDVDPRDLATIWRGGCIIRAKFLNRIVEAYDANAEL ESLLLDPYFKSELGDLIDSWRRVIVTATQLGLPIPVFASSLSYYDSLRAERLPAALIQGQRDFFGAHTYKRIDKDGSFHT EWSGDRSEVEA
Specific function: Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH [H]
COG id: COG0362
COG function: function code G; 6-phosphogluconate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 6-phosphogluconate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI40068518, Length=472, Percent_Identity=48.9406779661017, Blast_Score=451, Evalue=1e-127, Organism=Escherichia coli, GI1788341, Length=474, Percent_Identity=54.4303797468354, Blast_Score=524, Evalue=1e-150, Organism=Caenorhabditis elegans, GI17542558, Length=471, Percent_Identity=46.9214437367304, Blast_Score=462, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6321695, Length=478, Percent_Identity=46.8619246861925, Blast_Score=452, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6321977, Length=478, Percent_Identity=46.234309623431, Blast_Score=434, Evalue=1e-122, Organism=Drosophila melanogaster, GI24639279, Length=478, Percent_Identity=45.397489539749, Blast_Score=417, Evalue=1e-116, Organism=Drosophila melanogaster, GI24655230, Length=203, Percent_Identity=30.5418719211823, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI19922568, Length=203, Percent_Identity=30.5418719211823, Blast_Score=73, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR006114 - InterPro: IPR006113 - InterPro: IPR006115 - InterPro: IPR006184 - InterPro: IPR013328 - InterPro: IPR012284 - InterPro: IPR016040 - InterPro: IPR006183 [H]
Pfam domain/function: PF00393 6PGD; PF03446 NAD_binding_2 [H]
EC number: =1.1.1.44 [H]
Molecular weight: Translated: 52603; Mature: 52471
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00461 6PGD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSTINNMTNGDNLAQIGVVGLAVMGSNLARNFARNGHTVAVYNRSTDKTDKLIADHGS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCC EGNFIPSATVEEFVASLEKPRRAIIMVQAGNATDAVINQLADAMDEGDIIIDGGNALYTD CCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCEEEHH TIRREKEISARGLHFVGAGISGGEEGALNGPSIMPGGPAKSYESLGPLLESIAANVDGTP HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC CVTHIGPDGAGHFVKMVHNGIEYADMQVIGEAYHLLRYAAGMQPAEIAEVFKEWNAGDLD EEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHH SYLIEITAEVLSQVDAETGKPLIDVIVDAAGQKGTGRWTVKAALDLGIATTGIGEAVFAR HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEHHHCHHHCCHHHHHHHH ALSGATSQRAAAQGNLPAGVLTDLEALGVDKAQFVEDVRRALYASKLVAYAQGFDEIKAG HHHCCHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC SDENNWDVDPRDLATIWRGGCIIRAKFLNRIVEAYDANAELESLLLDPYFKSELGDLIDS CCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHH WRRVIVTATQLGLPIPVFASSLSYYDSLRAERLPAALIQGQRDFFGAHTYKRIDKDGSFH HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCC TEWSGDRSEVEA CCCCCCHHHCCC >Mature Secondary Structure PSSTINNMTNGDNLAQIGVVGLAVMGSNLARNFARNGHTVAVYNRSTDKTDKLIADHGS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCC EGNFIPSATVEEFVASLEKPRRAIIMVQAGNATDAVINQLADAMDEGDIIIDGGNALYTD CCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCEEEHH TIRREKEISARGLHFVGAGISGGEEGALNGPSIMPGGPAKSYESLGPLLESIAANVDGTP HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC CVTHIGPDGAGHFVKMVHNGIEYADMQVIGEAYHLLRYAAGMQPAEIAEVFKEWNAGDLD EEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHH SYLIEITAEVLSQVDAETGKPLIDVIVDAAGQKGTGRWTVKAALDLGIATTGIGEAVFAR HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEHHHCHHHCCHHHHHHHH ALSGATSQRAAAQGNLPAGVLTDLEALGVDKAQFVEDVRRALYASKLVAYAQGFDEIKAG HHHCCHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC SDENNWDVDPRDLATIWRGGCIIRAKFLNRIVEAYDANAELESLLLDPYFKSELGDLIDS CCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHH WRRVIVTATQLGLPIPVFASSLSYYDSLRAERLPAALIQGQRDFFGAHTYKRIDKDGSFH HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCC TEWSGDRSEVEA CCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 10568751; 9298659 [H]