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The map label for this gene is ccpA [H]

Identifier: 145295504

GI number: 145295504

Start: 1575439

End: 1576479

Strand: Reverse

Name: ccpA [H]

Synonym: cgR_1432

Alternate gene names: 145295504

Gene position: 1576479-1575439 (Counterclockwise)

Preceding gene: 145295507

Following gene: 145295503

Centisome position: 47.57

GC content: 50.53

Gene sequence:

>1041_bases
GTGACGACGGAAAATTTCCGACCGACTCTTAAAGATGTCGCTCGTCAAGCAGGTGTCTCAATCGCCACAGCATCACGAGC
ACTGGCAGATAATCCGGCGGTTGCTGCATCGACTCGTGAAAGAATCCAACAATTAGCCTCTGATCTGGGTTACCGGGCCA
ATGCTCAAGCTCGTGCGCTTCGCAGTTCTCGCAGCAACACCATTGGTGTGATTGTTCCCAGTTTGATTAACCATTACTTC
GCCGCAATGGTTACTGAAATTCAAACCACTGCGAGTAAAGCCGGGTTTGCCACGATTATCACCAACAGTAATGAAGATGC
CACCACCATGTCTGGATCTTTGGAGTTTCTCACCTCGCATGGTGTCGATGGAATCGTCTGCGTGCCTAATGAAGAATGCG
CGGATCAACTAGAAGACTTGCAGAAGCAAGGAATGCCCGTGGTGTTGGTTGACCGAGAGCTTCCAGGAGACTCCACCATC
CCAACGGTGACTTCTAATCCTCAACCAGGAATCGTCGCAGCGGTAGAACTCCTGGCGCACAACAACGCTGTGCCGATCGG
CTATCTCTCTGGCCCCATGGATACTTCGACAGGTCGCGAACGATTAGAGAGTTTCAAAGCAGCCTGTGCCAACTCCAAAA
TAGGCGAGCAGCTCGTTTTTCTGGGTGGGTACGAACAAAGCGTTGGGTTTGAAGGCGCTACGAAATTGCTCGATCAAGGA
GCTAAAACTCTTTTTGCGGGCGATTCCATGATGACGATCGGTGTCATTGAGGCCTGCCACAAGGCTGGTTTGGTTATCGG
AAAGGATGTCAGCGTGATTGGTTTTGATACCCATCCGCTTTTTGCCCTGCAGCTTCATCCATTGACAGTCATTGATCAAA
ATGTGGAACAACTAGCCCAACGAGCTGTGTCTATCCTCACCGAACTAATTGCAGGCACGGTGCCCAGCGTCACGAAGACT
ACGATCCCCACTGCCCTTATTCAGCGTGAATCAATCATCAACTCCACTTTAAGGAAGAAGGATGGACTCCCCAATGAGTA
A

Upstream 100 bases:

>100_bases
CCAACGTAGCCCTGCACGTAATAGGTTAAAACAAAAGCGAATGTAAACGTTTGCAGTAAACGATTACATAGAGGTAGATA
ACGAGATAAAGGGAGGTGCT

Downstream 100 bases:

>100_bases
CTCAATCGGTACCGACATTGTCGTTGTCGGATCCATCAATGCCGATCTCACCGCAAAAGTTCAACGCCACCCTGAACCTG
GAGAAACCCTCCTGGGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Catabolite control protein [H]

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MTTENFRPTLKDVARQAGVSIATASRALADNPAVAASTRERIQQLASDLGYRANAQARALRSSRSNTIGVIVPSLINHYF
AAMVTEIQTTASKAGFATIITNSNEDATTMSGSLEFLTSHGVDGIVCVPNEECADQLEDLQKQGMPVVLVDRELPGDSTI
PTVTSNPQPGIVAAVELLAHNNAVPIGYLSGPMDTSTGRERLESFKAACANSKIGEQLVFLGGYEQSVGFEGATKLLDQG
AKTLFAGDSMMTIGVIEACHKAGLVIGKDVSVIGFDTHPLFALQLHPLTVIDQNVEQLAQRAVSILTELIAGTVPSVTKT
TIPTALIQRESIINSTLRKKDGLPNE

Sequences:

>Translated_346_residues
MTTENFRPTLKDVARQAGVSIATASRALADNPAVAASTRERIQQLASDLGYRANAQARALRSSRSNTIGVIVPSLINHYF
AAMVTEIQTTASKAGFATIITNSNEDATTMSGSLEFLTSHGVDGIVCVPNEECADQLEDLQKQGMPVVLVDRELPGDSTI
PTVTSNPQPGIVAAVELLAHNNAVPIGYLSGPMDTSTGRERLESFKAACANSKIGEQLVFLGGYEQSVGFEGATKLLDQG
AKTLFAGDSMMTIGVIEACHKAGLVIGKDVSVIGFDTHPLFALQLHPLTVIDQNVEQLAQRAVSILTELIAGTVPSVTKT
TIPTALIQRESIINSTLRKKDGLPNE
>Mature_345_residues
TTENFRPTLKDVARQAGVSIATASRALADNPAVAASTRERIQQLASDLGYRANAQARALRSSRSNTIGVIVPSLINHYFA
AMVTEIQTTASKAGFATIITNSNEDATTMSGSLEFLTSHGVDGIVCVPNEECADQLEDLQKQGMPVVLVDRELPGDSTIP
TVTSNPQPGIVAAVELLAHNNAVPIGYLSGPMDTSTGRERLESFKAACANSKIGEQLVFLGGYEQSVGFEGATKLLDQGA
KTLFAGDSMMTIGVIEACHKAGLVIGKDVSVIGFDTHPLFALQLHPLTVIDQNVEQLAQRAVSILTELIAGTVPSVTKTT
IPTALIQRESIINSTLRKKDGLPNE

Specific function: Transcriptional regulator involved in both the repression of carbohydrate utilization genes such as the alpha- amylase (amyE) and the acetyl-coenzyme A synthetase (acsA); and in the positive regulation of genes involved in excretion of excess carbon such

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789068, Length=332, Percent_Identity=29.8192771084337, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1790194, Length=328, Percent_Identity=27.4390243902439, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1788474, Length=329, Percent_Identity=28.8753799392097, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1790369, Length=308, Percent_Identity=26.9480519480519, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1787948, Length=336, Percent_Identity=26.1904761904762, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1789202, Length=339, Percent_Identity=28.6135693215339, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1787580, Length=329, Percent_Identity=25.8358662613982, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1786540, Length=331, Percent_Identity=25.3776435045317, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI48994940, Length=280, Percent_Identity=25, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1790715, Length=145, Percent_Identity=31.0344827586207, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1787906, Length=200, Percent_Identity=27.5, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786268, Length=333, Percent_Identity=23.7237237237237, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1790689, Length=249, Percent_Identity=24.4979919678715, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006377
- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 36641; Mature: 36510

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTENFRPTLKDVARQAGVSIATASRALADNPAVAASTRERIQQLASDLGYRANAQARAL
CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
RSSRSNTIGVIVPSLINHYFAAMVTEIQTTASKAGFATIITNSNEDATTMSGSLEFLTSH
HHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCHHHHHHC
GVDGIVCVPNEECADQLEDLQKQGMPVVLVDRELPGDSTIPTVTSNPQPGIVAAVELLAH
CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHC
NNAVPIGYLSGPMDTSTGRERLESFKAACANSKIGEQLVFLGGYEQSVGFEGATKLLDQG
CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCHHHHHHHHCC
AKTLFAGDSMMTIGVIEACHKAGLVIGKDVSVIGFDTHPLFALQLHPLTVIDQNVEQLAQ
CCEEECCCCHHHHHHHHHHHHCCEEEECCEEEEEECCCCEEEEEECCHHHHHHHHHHHHH
RAVSILTELIAGTVPSVTKTTIPTALIQRESIINSTLRKKDGLPNE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTENFRPTLKDVARQAGVSIATASRALADNPAVAASTRERIQQLASDLGYRANAQARAL
CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
RSSRSNTIGVIVPSLINHYFAAMVTEIQTTASKAGFATIITNSNEDATTMSGSLEFLTSH
HHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCHHHHHHC
GVDGIVCVPNEECADQLEDLQKQGMPVVLVDRELPGDSTIPTVTSNPQPGIVAAVELLAH
CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHC
NNAVPIGYLSGPMDTSTGRERLESFKAACANSKIGEQLVFLGGYEQSVGFEGATKLLDQG
CCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCHHHHHHHHCC
AKTLFAGDSMMTIGVIEACHKAGLVIGKDVSVIGFDTHPLFALQLHPLTVIDQNVEQLAQ
CCEEECCCCHHHHHHHHHHHHCCEEEECCEEEEEECCCCEEEEEECCHHHHHHHHHHHHH
RAVSILTELIAGTVPSVTKTTIPTALIQRESIINSTLRKKDGLPNE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]