| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145295485
Identifier: 145295485
GI number: 145295485
Start: 1553871
End: 1554503
Strand: Reverse
Name: 145295485
Synonym: cgR_1415
Alternate gene names: NA
Gene position: 1554503-1553871 (Counterclockwise)
Preceding gene: 145295486
Following gene: 145295484
Centisome position: 46.9
GC content: 44.08
Gene sequence:
>633_bases ATGTGGATAACCGCACGGCACTGCGTTACCTCCGAGAAAGACTTCCTTGGATACCTGGAGCAATCCGATGGTGAAGTCGC AGGTGTTGAAAATACCTACACAATTTCAGAGCACCATGATTTAGCTTTAATCAAGGTGGGGAGAGGTATTTCTGCTCAAA CTTTTGATCTCCCCGAAGAAAAGATCGCTATAGGAAAAGTTCTGACGCTCATTGGGTACGGCGGTAGCAACGATTTTTCT TCAATTGCGAGAGTTGAGTCAGTAGCGCACTTAGATAAATTCAATGTAGGTTTCAGTACCTATTATTTGGATGTACTGGA AACTGTTTCTTTAACTGATTCTAGAAGCTGTAACGGTGATTCCGGAGGAGCAGTCTTTGCAGGGAATACGATTCATGCAG TACATACAGCCGGAGCGATCAATTTTGACTGCTCACCGGGGGAAGGTAAAAAAATGTGGCATTCTGCTATTTCGCCCCAC ACTGCATGGATACATCAAATTATGAGTTCGGAAAATAGTACTTCTGTAGAAGAAGAACAACGAGCGTTCGAGGGATTTCG ATCTCGATACCGAATCGCTGAGGATCAACCTTCGGCAACTTTTTCGAGTTCTTTATCCCCTCTCAGTTCCTAA
Upstream 100 bases:
>100_bases TAGTGGACAATAGAATCGCCGCGCTGTGGCAGTTCGATCCTGAGGCCGAAGATACCAAAAAGGTTGTTCGTTCTTGTACT GCTAATCACATCGAGGGAAA
Downstream 100 bases:
>100_bases TCCAATTGCCTCAGGAGCAATCCCTGAGGTTTATCATCAAGATTAGAGGGCTCTATCATGGTTGCTAACCATGGGCGATC TCGTTAATCCTTGGGTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MWITARHCVTSEKDFLGYLEQSDGEVAGVENTYTISEHHDLALIKVGRGISAQTFDLPEEKIAIGKVLTLIGYGGSNDFS SIARVESVAHLDKFNVGFSTYYLDVLETVSLTDSRSCNGDSGGAVFAGNTIHAVHTAGAINFDCSPGEGKKMWHSAISPH TAWIHQIMSSENSTSVEEEQRAFEGFRSRYRIAEDQPSATFSSSLSPLSS
Sequences:
>Translated_210_residues MWITARHCVTSEKDFLGYLEQSDGEVAGVENTYTISEHHDLALIKVGRGISAQTFDLPEEKIAIGKVLTLIGYGGSNDFS SIARVESVAHLDKFNVGFSTYYLDVLETVSLTDSRSCNGDSGGAVFAGNTIHAVHTAGAINFDCSPGEGKKMWHSAISPH TAWIHQIMSSENSTSVEEEQRAFEGFRSRYRIAEDQPSATFSSSLSPLSS >Mature_210_residues MWITARHCVTSEKDFLGYLEQSDGEVAGVENTYTISEHHDLALIKVGRGISAQTFDLPEEKIAIGKVLTLIGYGGSNDFS SIARVESVAHLDKFNVGFSTYYLDVLETVSLTDSRSCNGDSGGAVFAGNTIHAVHTAGAINFDCSPGEGKKMWHSAISPH TAWIHQIMSSENSTSVEEEQRAFEGFRSRYRIAEDQPSATFSSSLSPLSS
Specific function: Unknown
COG id: COG0265
COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22801; Mature: 22801
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWITARHCVTSEKDFLGYLEQSDGEVAGVENTYTISEHHDLALIKVGRGISAQTFDLPEE CEEECCHHCCCCHHHHHHHHCCCCCEECCCCEEEECCCCCEEEEEECCCCCCCCCCCCHH KIAIGKVLTLIGYGGSNDFSSIARVESVAHLDKFNVGFSTYYLDVLETVSLTDSRSCNGD HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC SGGAVFAGNTIHAVHTAGAINFDCSPGEGKKMWHSAISPHTAWIHQIMSSENSTSVEEEQ CCCEEEECCEEEEEEECCEEEECCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHH RAFEGFRSRYRIAEDQPSATFSSSLSPLSS HHHHHHHHHCCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure MWITARHCVTSEKDFLGYLEQSDGEVAGVENTYTISEHHDLALIKVGRGISAQTFDLPEE CEEECCHHCCCCHHHHHHHHCCCCCEECCCCEEEECCCCCEEEEEECCCCCCCCCCCCHH KIAIGKVLTLIGYGGSNDFSSIARVESVAHLDKFNVGFSTYYLDVLETVSLTDSRSCNGD HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC SGGAVFAGNTIHAVHTAGAINFDCSPGEGKKMWHSAISPHTAWIHQIMSSENSTSVEEEQ CCCEEEECCEEEEEEECCEEEECCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHH RAFEGFRSRYRIAEDQPSATFSSSLSPLSS HHHHHHHHHCCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA