| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is glnH [H]
Identifier: 145295473
GI number: 145295473
Start: 1540247
End: 1541251
Strand: Reverse
Name: glnH [H]
Synonym: cgR_1406
Alternate gene names: 145295473
Gene position: 1541251-1540247 (Counterclockwise)
Preceding gene: 145295475
Following gene: 145295472
Centisome position: 46.5
GC content: 56.02
Gene sequence:
>1005_bases ATGGCAGGTAGTATTTTGCCCATGATTGAGAGTTTCACCCGATTGCGAATTTCGCAGACACCGCCTCTGAAACGGCTACT GCATAGCACCTTGCGTTTCCCCAAAATCCCCAAGCGCGCTGTAGCGGCGACCGTCGGCATCGTGGCAACCTCATTCACCT TGGCTTCTTGTGTCACCAATGAGGAGCAGGGCAACCCAGATGGCTGGGAGCAGATCGTTCCAGATCCTGTACCGGAGATT CAGGCGATGGTTCCCGAAGCTCTGGCTCAGCGCGGTGTGCTCACCGCCGGTGCCAACCCACCTTTCCCACCGTTTGAGTT TAAAGATTCCGATGGTCAGATTATCGGTGTGGAAATGGACCTCGTGCGTGCAATGGCGGGGGTGATGGGCTTGGAGTTCA GCCCTCAGGAGCAGGATTTCTCCCTCATCCTTCCATCAGTTCAAGCTGGCACCCTTGATATCGGAGCCTCTGGCTTCACT GACAACGAGGAACGCCGCGAGAACTTTGATTTCATCGATTTCCTCTACGCAGGTGTGCAGTGGGCGCAGGCAACTGATCG TGAAACCCCAATCGATCCGGAAAACGCCTGTGGTCTCACCGTTGCTGTACAGCGCACAACCGTGGCAGAGACCGACGATG TCCGTCCTCGCTCAGCTCAATGTGAAGCCGAAGGCAAAGAGCCGATCACCATTTTGTCTTATGAAACCGCAGATACTGCA GCTACCGCATTGATCCTGGGACGCGCAGACGCACTTGCTGCGGACTCCCCTGTTTCAGCTTGGGCTGCAGAGCGCTCCGA AGGCCGCATCGAAGTTGTGGGCGATATGTACTTGGCTGCGCCATTTGGTTTCGCATTCCCGTTGGAATCTGACCTCACCC CAGCAGCAGCTGCGGCGTTCCAGCACTTGATTGACACCGGCGATTACCAGCGCATCATGGCGCAATGGGGCATTGAAGAA GGCCTTCTTGATGAGGCCCTGATCAACGAACAGCCACTCAAGTAG
Upstream 100 bases:
>100_bases TAGCTGTTTATTTTAAAGTCCCTCCCGAGCCCATGCCGGATAAAACAAGACCCGAGCGCCTGCCAACGCAAAATCCAGCC TCACTTAAGGTTATTGCACC
Downstream 100 bases:
>100_bases AGCCTTCCAGCAACTAAAAACAATTAAAGGATTACTTCACAGATGTCAGATCTTAATCAAGGGCCTGGAGCTTCAACGGC CCAACCAACACCGATTGAAG
Product: hypothetical protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MAGSILPMIESFTRLRISQTPPLKRLLHSTLRFPKIPKRAVAATVGIVATSFTLASCVTNEEQGNPDGWEQIVPDPVPEI QAMVPEALAQRGVLTAGANPPFPPFEFKDSDGQIIGVEMDLVRAMAGVMGLEFSPQEQDFSLILPSVQAGTLDIGASGFT DNEERRENFDFIDFLYAGVQWAQATDRETPIDPENACGLTVAVQRTTVAETDDVRPRSAQCEAEGKEPITILSYETADTA ATALILGRADALAADSPVSAWAAERSEGRIEVVGDMYLAAPFGFAFPLESDLTPAAAAAFQHLIDTGDYQRIMAQWGIEE GLLDEALINEQPLK
Sequences:
>Translated_334_residues MAGSILPMIESFTRLRISQTPPLKRLLHSTLRFPKIPKRAVAATVGIVATSFTLASCVTNEEQGNPDGWEQIVPDPVPEI QAMVPEALAQRGVLTAGANPPFPPFEFKDSDGQIIGVEMDLVRAMAGVMGLEFSPQEQDFSLILPSVQAGTLDIGASGFT DNEERRENFDFIDFLYAGVQWAQATDRETPIDPENACGLTVAVQRTTVAETDDVRPRSAQCEAEGKEPITILSYETADTA ATALILGRADALAADSPVSAWAAERSEGRIEVVGDMYLAAPFGFAFPLESDLTPAAAAAFQHLIDTGDYQRIMAQWGIEE GLLDEALINEQPLK >Mature_333_residues AGSILPMIESFTRLRISQTPPLKRLLHSTLRFPKIPKRAVAATVGIVATSFTLASCVTNEEQGNPDGWEQIVPDPVPEIQ AMVPEALAQRGVLTAGANPPFPPFEFKDSDGQIIGVEMDLVRAMAGVMGLEFSPQEQDFSLILPSVQAGTLDIGASGFTD NEERRENFDFIDFLYAGVQWAQATDRETPIDPENACGLTVAVQRTTVAETDDVRPRSAQCEAEGKEPITILSYETADTAA TALILGRADALAADSPVSAWAAERSEGRIEVVGDMYLAAPFGFAFPLESDLTPAAAAAFQHLIDTGDYQRIMAQWGIEEG LLDEALINEQPLK
Specific function: Involved in a glutamine-transport system glnHPQ [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=226, Percent_Identity=28.7610619469027, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788228, Length=232, Percent_Identity=22.4137931034483, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 36052; Mature: 35921
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSILPMIESFTRLRISQTPPLKRLLHSTLRFPKIPKRAVAATVGIVATSFTLASCVTN CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC EEQGNPDGWEQIVPDPVPEIQAMVPEALAQRGVLTAGANPPFPPFEFKDSDGQIIGVEMD CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCEECCCCCEEEEHHH LVRAMAGVMGLEFSPQEQDFSLILPSVQAGTLDIGASGFTDNEERRENFDFIDFLYAGVQ HHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCHHHHHCCCHHHHHHHHHH WAQATDRETPIDPENACGLTVAVQRTTVAETDDVRPRSAQCEAEGKEPITILSYETADTA HHHCCCCCCCCCCCCCCCEEEEEEECEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHH ATALILGRADALAADSPVSAWAAERSEGRIEVVGDMYLAAPFGFAFPLESDLTPAAAAAF HHHHHEECCHHHCCCCCHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCCCHHHHHHH QHLIDTGDYQRIMAQWGIEEGLLDEALINEQPLK HHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure AGSILPMIESFTRLRISQTPPLKRLLHSTLRFPKIPKRAVAATVGIVATSFTLASCVTN CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC EEQGNPDGWEQIVPDPVPEIQAMVPEALAQRGVLTAGANPPFPPFEFKDSDGQIIGVEMD CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCEECCCCCEEEEHHH LVRAMAGVMGLEFSPQEQDFSLILPSVQAGTLDIGASGFTDNEERRENFDFIDFLYAGVQ HHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCHHHHHCCCHHHHHHHHHH WAQATDRETPIDPENACGLTVAVQRTTVAETDDVRPRSAQCEAEGKEPITILSYETADTA HHHCCCCCCCCCCCCCCCEEEEEEECEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHH ATALILGRADALAADSPVSAWAAERSEGRIEVVGDMYLAAPFGFAFPLESDLTPAAAAAF HHHHHEECCHHHCCCCCHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCCCCHHHHHHH QHLIDTGDYQRIMAQWGIEEGLLDEALINEQPLK HHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]