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The map label for this gene is ylbH [H]

Identifier: 145295469

GI number: 145295469

Start: 1536844

End: 1537428

Strand: Direct

Name: ylbH [H]

Synonym: cgR_1402

Alternate gene names: 145295469

Gene position: 1536844-1537428 (Clockwise)

Preceding gene: 145295468

Following gene: 145295470

Centisome position: 46.37

GC content: 58.97

Gene sequence:

>585_bases
ATGGGTCAAACCCGCATCATTTCCGGCGACGCACGCGGCCGAAAGATCGAAGTACCACCAGCAGGTACCCGCCCCACCTC
TGACCGCGCACGCGAAGGTCTCTTCTCCTCACTGCAGGTCCGTTTCGGATTTGAGGGACAGCGCGTCCTCGACATTTTTG
CCGGCTCCGGCGCACTCGGATTGGAAGCTGCCTCCAGGGGTGCCGATGAGGTAGTTCTGGTCGAGTCGAATCCTAAGGCC
GTAGAGGTAATTCGACGGAATGTGGACGTCGTAAAGCATCCTCGCGTAACCGTCGCAGAGATGAAAGCATCCACCTACCT
TGCGTCCGCACCCGATAAGTTTTTCACGATGGTGCTCGCCGACCCGCCCTATGAGCTTGCCGACGACGCCGTCACCGAGA
TGCTCACCGCATTGACGCCTAAGCTTCTCGACGGCGCCGCCGTGGTCGTGGAACGCCACGTAGACTCGCCAGAAACCGCA
TGGCCCGCCTGGCTGGTACCCACCACCCAGAAACTTAAAAAACGAACCTACGGCATAGCACGCATGGACATGGCCGTTTT
CGACGAATCTCTGCTTCAGGAGTAA

Upstream 100 bases:

>100_bases
TTATGGCACCGGGACCTGGCATCGTAGCCAAGGTTTCTTTTGATGATTTCTCCGACGTCACCGGCGGCGATGAGCTCCTC
GAATTGGAGGCAAAGAACTA

Downstream 100 bases:

>100_bases
CCAATGAAAGCCGTTTGCCCAGGATCATTCGACCCCATCACCCTCGGCCATCTCGACATCGTGACCCGCGCCGCCGCGCA
ATTTAGCGAAGTCACCATCT

Product: N6-adenine-specific methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MGQTRIISGDARGRKIEVPPAGTRPTSDRAREGLFSSLQVRFGFEGQRVLDIFAGSGALGLEAASRGADEVVLVESNPKA
VEVIRRNVDVVKHPRVTVAEMKASTYLASAPDKFFTMVLADPPYELADDAVTEMLTALTPKLLDGAAVVVERHVDSPETA
WPAWLVPTTQKLKKRTYGIARMDMAVFDESLLQE

Sequences:

>Translated_194_residues
MGQTRIISGDARGRKIEVPPAGTRPTSDRAREGLFSSLQVRFGFEGQRVLDIFAGSGALGLEAASRGADEVVLVESNPKA
VEVIRRNVDVVKHPRVTVAEMKASTYLASAPDKFFTMVLADPPYELADDAVTEMLTALTPKLLDGAAVVVERHVDSPETA
WPAWLVPTTQKLKKRTYGIARMDMAVFDESLLQE
>Mature_193_residues
GQTRIISGDARGRKIEVPPAGTRPTSDRAREGLFSSLQVRFGFEGQRVLDIFAGSGALGLEAASRGADEVVLVESNPKAV
EVIRRNVDVVKHPRVTVAEMKASTYLASAPDKFFTMVLADPPYELADDAVTEMLTALTPKLLDGAAVVVERHVDSPETAW
PAWLVPTTQKLKKRTYGIARMDMAVFDESLLQE

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=156, Percent_Identity=38.4615384615385, Blast_Score=81, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 21139; Mature: 21008

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQTRIISGDARGRKIEVPPAGTRPTSDRAREGLFSSLQVRFGFEGQRVLDIFAGSGALG
CCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCC
LEAASRGADEVVLVESNPKAVEVIRRNVDVVKHPRVTVAEMKASTYLASAPDKFFTMVLA
HHHHCCCCCEEEEECCCCHHHHHHHHCCCHHCCCCEEEEHHHHHHHCCCCCCCEEEEEEC
DPPYELADDAVTEMLTALTPKLLDGAAVVVERHVDSPETAWPAWLVPTTQKLKKRTYGIA
CCCHHHHHHHHHHHHHHHCHHHHCCCEEEEEECCCCCCCCCCEEECCCHHHHHHHHCCHH
RMDMAVFDESLLQE
HHHHHHHHHHHHCC
>Mature Secondary Structure 
GQTRIISGDARGRKIEVPPAGTRPTSDRAREGLFSSLQVRFGFEGQRVLDIFAGSGALG
CCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCC
LEAASRGADEVVLVESNPKAVEVIRRNVDVVKHPRVTVAEMKASTYLASAPDKFFTMVLA
HHHHCCCCCEEEEECCCCHHHHHHHHCCCHHCCCCEEEEHHHHHHHCCCCCCCEEEEEEC
DPPYELADDAVTEMLTALTPKLLDGAAVVVERHVDSPETAWPAWLVPTTQKLKKRTYGIA
CCCHHHHHHHHHHHHHHHCHHHHCCCEEEEEECCCCCCCCCCEEECCCHHHHHHHHCCHH
RMDMAVFDESLLQE
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]