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The map label for this gene is 145295438

Identifier: 145295438

GI number: 145295438

Start: 1508032

End: 1508592

Strand: Reverse

Name: 145295438

Synonym: cgR_1375

Alternate gene names: NA

Gene position: 1508592-1508032 (Counterclockwise)

Preceding gene: 145295440

Following gene: 145295437

Centisome position: 45.52

GC content: 55.79

Gene sequence:

>561_bases
TTGTGGAGTCTAAAGACCAGTGATTTTTCCCGATCCCCCACTGGCCGCCTAGCGGAAATTATTGATACCGCGTGGCGGTT
GGTGGAAACACGTGGCTGGGCGAATGTGAGCATGCGAACCCTGGCCGCGGAGCTAAATATCAAGGCGCCGTCGCTGTACA
AGCATGTAAAAACGCGCGAGGATATCGCCGCACACATCGCCACGAAGGCATTTATTCAGCTGGGGCAAAGCCTGCATGAA
CATTGTAAAGGTGTGGAGGATTTGCTTGTGGAATACCGCTCCATGGCTCGGGAGAATCCAAATATTTACCGGCTTCTTAC
CAGCACAGAGTTCCCCCGCGAGCTACTTCCAGAGGGTTTAGAAACTTGGGCGGTCACACCGTTTTACCTGGTCACCGGCC
ATGATCCGATCAAGGGTCAAGCACTGTGGGCATTCGCGCACGGCATGGCCATCCTGGAGATCGACGCCCGATTCGCCGGC
CCCAACAATGGATCCCCCGCGGATGGCATGTGGGAGATCGGCGCGCGGGCATTTGACACACAAGTATTCGACCAAGACTG
A

Upstream 100 bases:

>100_bases
ACGCAGTCGGAGAGTTTTACGGGGATTCTCGGGATGTTTGCCCCACTGTTTATGGATTTGGGGGCATCATTTGAGGCATC
CAATAAAGCACTTGCAAATT

Downstream 100 bases:

>100_bases
GCAAAAAGGCGCTATGCTGTGGGGAGATCGCAAGCCCCTATCCGGTCTCTACTAAGCCCCGAAGTTGAAGGGAAACTCCC
CCAATGCCGTTTCCAGCACT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TETR-Family Transcriptional Regulator; Regulatory Protein TetR; TetR Family Transcriptional Repressor

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MWSLKTSDFSRSPTGRLAEIIDTAWRLVETRGWANVSMRTLAAELNIKAPSLYKHVKTREDIAAHIATKAFIQLGQSLHE
HCKGVEDLLVEYRSMARENPNIYRLLTSTEFPRELLPEGLETWAVTPFYLVTGHDPIKGQALWAFAHGMAILEIDARFAG
PNNGSPADGMWEIGARAFDTQVFDQD

Sequences:

>Translated_186_residues
MWSLKTSDFSRSPTGRLAEIIDTAWRLVETRGWANVSMRTLAAELNIKAPSLYKHVKTREDIAAHIATKAFIQLGQSLHE
HCKGVEDLLVEYRSMARENPNIYRLLTSTEFPRELLPEGLETWAVTPFYLVTGHDPIKGQALWAFAHGMAILEIDARFAG
PNNGSPADGMWEIGARAFDTQVFDQD
>Mature_186_residues
MWSLKTSDFSRSPTGRLAEIIDTAWRLVETRGWANVSMRTLAAELNIKAPSLYKHVKTREDIAAHIATKAFIQLGQSLHE
HCKGVEDLLVEYRSMARENPNIYRLLTSTEFPRELLPEGLETWAVTPFYLVTGHDPIKGQALWAFAHGMAILEIDARFAG
PNNGSPADGMWEIGARAFDTQVFDQD

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20914; Mature: 20914

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSLKTSDFSRSPTGRLAEIIDTAWRLVETRGWANVSMRTLAAELNIKAPSLYKHVKTRE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
DIAAHIATKAFIQLGQSLHEHCKGVEDLLVEYRSMARENPNIYRLLTSTEFPRELLPEGL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
ETWAVTPFYLVTGHDPIKGQALWAFAHGMAILEIDARFAGPNNGSPADGMWEIGARAFDT
HHHCCCEEEEEECCCCCCCCCHHHHHCCEEEEEEECEECCCCCCCCCCCHHHHCCHHHCC
QVFDQD
CCCCCC
>Mature Secondary Structure
MWSLKTSDFSRSPTGRLAEIIDTAWRLVETRGWANVSMRTLAAELNIKAPSLYKHVKTRE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
DIAAHIATKAFIQLGQSLHEHCKGVEDLLVEYRSMARENPNIYRLLTSTEFPRELLPEGL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
ETWAVTPFYLVTGHDPIKGQALWAFAHGMAILEIDARFAGPNNGSPADGMWEIGARAFDT
HHHCCCEEEEEECCCCCCCCCHHHHHCCEEEEEEECEECCCCCCCCCCCHHHHCCHHHCC
QVFDQD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA