| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145295428
Identifier: 145295428
GI number: 145295428
Start: 1498299
End: 1499363
Strand: Reverse
Name: 145295428
Synonym: cgR_1365
Alternate gene names: NA
Gene position: 1499363-1498299 (Counterclockwise)
Preceding gene: 145295433
Following gene: 145295417
Centisome position: 45.24
GC content: 48.83
Gene sequence:
>1065_bases GTGCGTTATATTGCTTTAGCGAAAGTAACTACCATGCATCAACGTTCGATGAGCTTCACTTTCATTCGTACTTTTTTCGT ACTTTTTGGCATCACGTTGTTAGTGTCATGCGTTCCAGAGCCTCCTGACTCCTACACTAAAGAATCCACTGTGCTGCGGT ATCAGGTCTCTGATTTCAATCTAAACTTCGTGGAATTAGCAGTTGCGCTTGGGTATTTGAACAACATTGAGCTCCAAGTA GTCGGATCTGTACAAGGCGGCGTTGAGTCCATTGAATCGCTCAAAAAGGATGACATTGACTTCGCGACAGTCCCCTTCAT TGGCCTTGTTGCAGGAGAGATAGCCACCGGTGCGCCCATCAAAGCAGTGGCCGCAAGTTACGGAATTTCCCACGATTCTT CTTCTGCACTTCTAGTCCTTAAAGACAGTGAGATACACGAAGTGCACGATCTCATTGGCAAAACAGTTGGCATAAACACC CTCGGTGCTCTGGGATCTGCGATGGTTGAGCGTCATCTATTCGACGCCGGCCTCACCGAACCCGAGATCGTGAGCGTCAC TCAACGTGCATTACCCGGTGAGTACTTAGAACAACGCCTCTACCAGGGGCAAGTTGATGCAATTTGGGTCACCGATAGCG CTAAACACCAAGCGCTTGAAACTGGAGATTTTCGGATCTTGGCAGAGGATTCAGACCTTGTGCAGGAACTCAACACTGGC TGCGTGGTGGTGTCGCAAAAACTCATCGACGAGCACCCCGCAGTGGTTGGAGAATTAGTGGATGGAATAGCTCAGGCAAT CGAGTTTGAACGATCCCACTCCCCTGAAGAAGTGCGCGAAGTTTATTTCAACTACCTCGAAGCCCATGGTCAGAGTGATA GAATATCCAGCTTTAGATATTGGGAGCATTCGGGCATCGCAACGCGAGGTGGAATACTCACCGATAGAGAGTTCAGCATG TGGTCCCACTGGATTGACCGCCAATACGACGTCCCCGATATCAATCCAGCAAGTATTTACACCAACCAATTCAACCCATA CCGAAAAGTGAACCCCTCACCATAA
Upstream 100 bases:
>100_bases TGAGATTAACCATAAAAGAAAAACTGCCTCATTGTTTCGAAATCCCACATTCAAGTAAAAATAGATTTGAGAACAAAAAG ATGGGGGGAAATATGTTAAA
Downstream 100 bases:
>100_bases AGATAAGGGGTTAGGCCTCGAAATTTAGCTTTGCAGCGCCTTGACGATGCGGTCTCCCACCTCAGTGGTAGAAATCGGCT GAGAGTTATCTCGGCCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; ABC Sulfonate Transporter; NMT1/THI5 Like Domain-Containing Protein; ABC Transporter; NMT1/THI5-Like Domain-Containing Protein; ABC-Type Nitrate/Sulfonate/Bicarbonate Transport Systems; Fis Family Transcriptional Regulator; ABC Transporter Component A
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRYIALAKVTTMHQRSMSFTFIRTFFVLFGITLLVSCVPEPPDSYTKESTVLRYQVSDFNLNFVELAVALGYLNNIELQV VGSVQGGVESIESLKKDDIDFATVPFIGLVAGEIATGAPIKAVAASYGISHDSSSALLVLKDSEIHEVHDLIGKTVGINT LGALGSAMVERHLFDAGLTEPEIVSVTQRALPGEYLEQRLYQGQVDAIWVTDSAKHQALETGDFRILAEDSDLVQELNTG CVVVSQKLIDEHPAVVGELVDGIAQAIEFERSHSPEEVREVYFNYLEAHGQSDRISSFRYWEHSGIATRGGILTDREFSM WSHWIDRQYDVPDINPASIYTNQFNPYRKVNPSP
Sequences:
>Translated_354_residues MRYIALAKVTTMHQRSMSFTFIRTFFVLFGITLLVSCVPEPPDSYTKESTVLRYQVSDFNLNFVELAVALGYLNNIELQV VGSVQGGVESIESLKKDDIDFATVPFIGLVAGEIATGAPIKAVAASYGISHDSSSALLVLKDSEIHEVHDLIGKTVGINT LGALGSAMVERHLFDAGLTEPEIVSVTQRALPGEYLEQRLYQGQVDAIWVTDSAKHQALETGDFRILAEDSDLVQELNTG CVVVSQKLIDEHPAVVGELVDGIAQAIEFERSHSPEEVREVYFNYLEAHGQSDRISSFRYWEHSGIATRGGILTDREFSM WSHWIDRQYDVPDINPASIYTNQFNPYRKVNPSP >Mature_354_residues MRYIALAKVTTMHQRSMSFTFIRTFFVLFGITLLVSCVPEPPDSYTKESTVLRYQVSDFNLNFVELAVALGYLNNIELQV VGSVQGGVESIESLKKDDIDFATVPFIGLVAGEIATGAPIKAVAASYGISHDSSSALLVLKDSEIHEVHDLIGKTVGINT LGALGSAMVERHLFDAGLTEPEIVSVTQRALPGEYLEQRLYQGQVDAIWVTDSAKHQALETGDFRILAEDSDLVQELNTG CVVVSQKLIDEHPAVVGELVDGIAQAIEFERSHSPEEVREVYFNYLEAHGQSDRISSFRYWEHSGIATRGGILTDREFSM WSHWIDRQYDVPDINPASIYTNQFNPYRKVNPSP
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39289; Mature: 39289
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYIALAKVTTMHQRSMSFTFIRTFFVLFGITLLVSCVPEPPDSYTKESTVLRYQVSDFN CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC LNFVELAVALGYLNNIELQVVGSVQGGVESIESLKKDDIDFATVPFIGLVAGEIATGAPI CHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCH KAVAASYGISHDSSSALLVLKDSEIHEVHDLIGKTVGINTLGALGSAMVERHLFDAGLTE HHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC PEIVSVTQRALPGEYLEQRLYQGQVDAIWVTDSAKHQALETGDFRILAEDSDLVQELNTG CHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCEEEEECCHHHHHHHCCC CVVVSQKLIDEHPAVVGELVDGIAQAIEFERSHSPEEVREVYFNYLEAHGQSDRISSFRY EEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHE WEHSGIATRGGILTDREFSMWSHWIDRQYDVPDINPASIYTNQFNPYRKVNPSP ECCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure MRYIALAKVTTMHQRSMSFTFIRTFFVLFGITLLVSCVPEPPDSYTKESTVLRYQVSDFN CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC LNFVELAVALGYLNNIELQVVGSVQGGVESIESLKKDDIDFATVPFIGLVAGEIATGAPI CHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCH KAVAASYGISHDSSSALLVLKDSEIHEVHDLIGKTVGINTLGALGSAMVERHLFDAGLTE HHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC PEIVSVTQRALPGEYLEQRLYQGQVDAIWVTDSAKHQALETGDFRILAEDSDLVQELNTG CHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCEEEEECCHHHHHHHCCC CVVVSQKLIDEHPAVVGELVDGIAQAIEFERSHSPEEVREVYFNYLEAHGQSDRISSFRY EEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHE WEHSGIATRGGILTDREFSMWSHWIDRQYDVPDINPASIYTNQFNPYRKVNPSP ECCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA