Definition Corynebacterium glutamicum R chromosome, complete genome.
Accession NC_009342
Length 3,314,179

Click here to switch to the map view.

The map label for this gene is 145295420

Identifier: 145295420

GI number: 145295420

Start: 1488203

End: 1488574

Strand: Direct

Name: 145295420

Synonym: cgR_1357

Alternate gene names: NA

Gene position: 1488203-1488574 (Clockwise)

Preceding gene: 145295419

Following gene: 145295421

Centisome position: 44.9

GC content: 52.96

Gene sequence:

>372_bases
GTGGCATCGGTGCGCCCAACCTTCGTGATCTTACAGATCTCCGAATACTTCGGTGTCGCTGAAGCTGCGATTAATGCAGC
CACTGGACGTCTGACCAGCCTCAACGAAGTGTTTATCGACAACGCTGCCGAGATCCAAGACAACCTTTCTTCGCTGGTCG
CGCTTCAGAAAGATTTGGCACAGCGAGTCAACGTTGAAGGAGTCAATCCTGTTACTCCAGTTGATCTACTCGAACTTCGC
CTCGGTTCCGCGCAGCTGGCCGTTGCTGCAACTGCCATTGAGGTTCGTGTTGCTGGAGGAGCAGGTTATGTAAAGTCTTC
ATCAACGTCTCGTCGTTTCCGTGTTGAAATGGGAGCTTGCACGGGTCCGTGA

Upstream 100 bases:

>100_bases
TTGCTCTACTCGGTTTGAACGCAACTGCTTGCGCTTGGGTGAGCTTTGAGGATGTCTTCATTCCTGGGGCTCAGATTCTA
AGCCACGATTTCCTTACCTT

Downstream 100 bases:

>100_bases
TCTACAGGCCACGCAAAACTAAATCACTTTAAATATCAACACCCTGTTCACTGTCTGGTGCTTTCTGGGCAGCGGATGGG
GTGTTTGTTCTTCTTATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MASVRPTFVILQISEYFGVAEAAINAATGRLTSLNEVFIDNAAEIQDNLSSLVALQKDLAQRVNVEGVNPVTPVDLLELR
LGSAQLAVAATAIEVRVAGGAGYVKSSSTSRRFRVEMGACTGP

Sequences:

>Translated_123_residues
MASVRPTFVILQISEYFGVAEAAINAATGRLTSLNEVFIDNAAEIQDNLSSLVALQKDLAQRVNVEGVNPVTPVDLLELR
LGSAQLAVAATAIEVRVAGGAGYVKSSSTSRRFRVEMGACTGP
>Mature_122_residues
ASVRPTFVILQISEYFGVAEAAINAATGRLTSLNEVFIDNAAEIQDNLSSLVALQKDLAQRVNVEGVNPVTPVDLLELRL
GSAQLAVAATAIEVRVAGGAGYVKSSSTSRRFRVEMGACTGP

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12907; Mature: 12776

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVRPTFVILQISEYFGVAEAAINAATGRLTSLNEVFIDNAAEIQDNLSSLVALQKDLA
CCCCCCEEEEEEEHHHHCHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH
QRVNVEGVNPVTPVDLLELRLGSAQLAVAATAIEVRVAGGAGYVKSSSTSRRFRVEMGAC
HHCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEECCCCCCEEEEEECCC
TGP
CCC
>Mature Secondary Structure 
ASVRPTFVILQISEYFGVAEAAINAATGRLTSLNEVFIDNAAEIQDNLSSLVALQKDLA
CCCCCEEEEEEEHHHHCHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH
QRVNVEGVNPVTPVDLLELRLGSAQLAVAATAIEVRVAGGAGYVKSSSTSRRFRVEMGAC
HHCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEECCCCCCEEEEEECCC
TGP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA