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The map label for this gene is nrtD [H]

Identifier: 145295413

GI number: 145295413

Start: 1484787

End: 1485221

Strand: Reverse

Name: nrtD [H]

Synonym: cgR_1350

Alternate gene names: 145295413

Gene position: 1485221-1484787 (Counterclockwise)

Preceding gene: 145295415

Following gene: 145295409

Centisome position: 44.81

GC content: 65.06

Gene sequence:

>435_bases
TTGACCGCACGCGGCAACATCGACTTCGGCCTCCGCTCCGCGCGCCCCTCCTTGAGCAAAACCGAACGCGCCGACATCAC
CCGCACCCACCTCGAACAAGTAGGCCTCACCGACGCCGCCGAACGGCGCCCCGCCCGCCTCTCCGGCGGCATGCAACAGC
GAGTCGGCATCGCACGCGCCTTCGCCATCGACCCACCAATGATGCTTCTCGACGAACCCTTCGGCGCCCTCGACGCCCTC
ACCCGCCGCGAACTCCAGCTCCAACTACTCAACATTTGGGAAGCCTCCCGCCGCACCGTCGTCATGGTCACTCACGACGT
CGACGAGGCCATCCTGCTCTCCGACCGAGTTCTCGTGATGTCCAAGAGCCCCGAAGCCAACCATCATCGCCGATATTCCA
GTGAATCTTCCCCGCCCCCGACACGAGCTGAGTGA

Upstream 100 bases:

>100_bases
CTCCCCATCCACCGGCACAGTCAGCGCAGGCAACGAAGAAATTAAAGGACCAGGACCTGACCGAGGCATGGTTTTCCAAG
ACCACGCCCTCCTGCCCTGA

Downstream 100 bases:

>100_bases
AGACGCTTCTGTTGAAGCCGAGACCACAGCCCTGCGTAAGCGGATGCTGCATCTGCTGGCGCACTAGTTTCTAACACGTC
TTTTAAAGGCCACCCTTGAA

Product: hypothetical protein

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTARGNIDFGLRSARPSLSKTERADITRTHLEQVGLTDAAERRPARLSGGMQQRVGIARAFAIDPPMMLLDEPFGALDAL
TRRELQLQLLNIWEASRRTVVMVTHDVDEAILLSDRVLVMSKSPEANHHRRYSSESSPPPTRAE

Sequences:

>Translated_144_residues
MTARGNIDFGLRSARPSLSKTERADITRTHLEQVGLTDAAERRPARLSGGMQQRVGIARAFAIDPPMMLLDEPFGALDAL
TRRELQLQLLNIWEASRRTVVMVTHDVDEAILLSDRVLVMSKSPEANHHRRYSSESSPPPTRAE
>Mature_143_residues
TARGNIDFGLRSARPSLSKTERADITRTHLEQVGLTDAAERRPARLSGGMQQRVGIARAFAIDPPMMLLDEPFGALDALT
RRELQLQLLNIWEASRRTVVMVTHDVDEAILLSDRVLVMSKSPEANHHRRYSSESSPPPTRAE

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG1116

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI116734710, Length=112, Percent_Identity=34.8214285714286, Blast_Score=66, Evalue=8e-12,
Organism=Homo sapiens, GI105990541, Length=93, Percent_Identity=38.7096774193548, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1786563, Length=140, Percent_Identity=42.1428571428571, Blast_Score=116, Evalue=6e-28,
Organism=Escherichia coli, GI1788761, Length=127, Percent_Identity=48.8188976377953, Blast_Score=105, Evalue=1e-24,
Organism=Escherichia coli, GI1789032, Length=123, Percent_Identity=43.0894308943089, Blast_Score=102, Evalue=8e-24,
Organism=Escherichia coli, GI87081791, Length=145, Percent_Identity=40, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1788450, Length=109, Percent_Identity=47.7064220183486, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI1787164, Length=90, Percent_Identity=51.1111111111111, Blast_Score=93, Evalue=7e-21,
Organism=Escherichia coli, GI1787712, Length=123, Percent_Identity=39.8373983739837, Blast_Score=91, Evalue=3e-20,
Organism=Escherichia coli, GI1787370, Length=123, Percent_Identity=43.9024390243902, Blast_Score=87, Evalue=5e-19,
Organism=Escherichia coli, GI1787029, Length=144, Percent_Identity=36.8055555555556, Blast_Score=80, Evalue=4e-17,
Organism=Escherichia coli, GI1790467, Length=119, Percent_Identity=33.6134453781513, Blast_Score=71, Evalue=3e-14,
Organism=Escherichia coli, GI1787500, Length=115, Percent_Identity=34.7826086956522, Blast_Score=70, Evalue=4e-14,
Organism=Escherichia coli, GI1789672, Length=107, Percent_Identity=35.5140186915888, Blast_Score=70, Evalue=5e-14,
Organism=Escherichia coli, GI87081709, Length=123, Percent_Identity=34.9593495934959, Blast_Score=70, Evalue=7e-14,
Organism=Escherichia coli, GI87082267, Length=121, Percent_Identity=35.5371900826446, Blast_Score=69, Evalue=9e-14,
Organism=Escherichia coli, GI1786872, Length=114, Percent_Identity=37.719298245614, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI1786253, Length=123, Percent_Identity=34.1463414634146, Blast_Score=67, Evalue=5e-13,
Organism=Escherichia coli, GI1788225, Length=114, Percent_Identity=40.3508771929825, Blast_Score=66, Evalue=8e-13,
Organism=Escherichia coli, GI1789873, Length=92, Percent_Identity=46.7391304347826, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1788506, Length=115, Percent_Identity=30.4347826086957, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI1789962, Length=105, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI1786398, Length=95, Percent_Identity=42.1052631578947, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1788644, Length=123, Percent_Identity=34.9593495934959, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786703, Length=89, Percent_Identity=40.4494382022472, Blast_Score=63, Evalue=8e-12,
Organism=Escherichia coli, GI1789963, Length=93, Percent_Identity=37.6344086021505, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1787759, Length=97, Percent_Identity=41.2371134020619, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI48994997, Length=80, Percent_Identity=42.5, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI1787105, Length=106, Percent_Identity=37.7358490566038, Blast_Score=61, Evalue=3e-11,
Organism=Escherichia coli, GI1789864, Length=110, Percent_Identity=30.9090909090909, Blast_Score=61, Evalue=4e-11,
Organism=Escherichia coli, GI1787089, Length=93, Percent_Identity=40.8602150537634, Blast_Score=60, Evalue=4e-11,
Organism=Escherichia coli, GI1790190, Length=84, Percent_Identity=35.7142857142857, Blast_Score=60, Evalue=5e-11,
Organism=Escherichia coli, GI145693107, Length=97, Percent_Identity=38.1443298969072, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 16100; Mature: 15968

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARGNIDFGLRSARPSLSKTERADITRTHLEQVGLTDAAERRPARLSGGMQQRVGIARA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHCCCHHHHHHHHHH
FAIDPPMMLLDEPFGALDALTRRELQLQLLNIWEASRRTVVMVTHDVDEAILLSDRVLVM
EECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCEEEEE
SKSPEANHHRRYSSESSPPPTRAE
ECCCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TARGNIDFGLRSARPSLSKTERADITRTHLEQVGLTDAAERRPARLSGGMQQRVGIARA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHCCCHHHHHHHHHH
FAIDPPMMLLDEPFGALDALTRRELQLQLLNIWEASRRTVVMVTHDVDEAILLSDRVLVM
EECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCEEEEE
SKSPEANHHRRYSSESSPPPTRAE
ECCCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8437564 [H]