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The map label for this gene is ynaI [C]

Identifier: 145295409

GI number: 145295409

Start: 1478878

End: 1480452

Strand: Reverse

Name: ynaI [C]

Synonym: cgR_1346

Alternate gene names: 145295409

Gene position: 1480452-1478878 (Counterclockwise)

Preceding gene: 145295413

Following gene: 145295408

Centisome position: 44.67

GC content: 55.05

Gene sequence:

>1575_bases
TTGCTCTATTCATTGTGGAATTGGATTGTCGATACCGGTTTTGATGTAACAATTATCCTGGTCTTGGCGTTTTTGATTCC
ACGTATCGGCCGACTGGTCATGCGTATTATCAAGCGCCGAGTGGAGTCTGCAGCCGATGCGGACACCACTAAGAACCAGC
TCGCGTTCGCTGGCGTTGGCGTTTATATCGCGCAAATTGTGGCGTTTTTCATGCTTACCGTCTCCGCGATGCAGGCTTTT
GGTTTCTCTCTCGCGGGTGCTGCAATACCCGCAACCATTGCGTCAGCTGCCATTGGTCTTGGTGCGCAGTCGATTGTTGC
GGACTTCTTGGCCGGATTTTTCATCCTGACGGAAAAGCAATTCGGCGTGGGTGACTGGGTGCGTTTTGAGGGCAACGGCA
TCGTTGTTGAAGGCACCGTCATTGAGATCACCATGCGCGCGACCAAAATTCGCACGATTGCACAAGAGACCGTGATCATC
CCCAACTCCACGGCGAAAGTGTGCATCAACAATTCTAATAACTGGTCGCGTGCGGTTGTCGTTATTCCGATCCCCATGTT
GGGTTCTGAAAACATCACAGATGTCATCGCGCGCTCTGAAGCTGCGACTCGTCGCGCACTTGGCCAGGAGAAAATCGCAC
CGGAAATCCTCGGTGAACTCGATGTGCACCCAGCCACGGAAGTCACACCGCCAACGGTGGTCGGCATGCCGTGGATGGTC
ACCATGCGTTTCCTCGTGCAAGTCACCGCCGGCAATCAATGGCTGGTCGAACGCGCCATCCGCACAGAAATCATCAACGA
ATTCTGGGAAGAATACGGCAGCGCAACCACTACATCGGGAACCCTCATTGATTCCTTACACGTTGCGCATGAAGAGCCAA
AGACCTCGCTTATCGACGCCTCCCCCCAGGCTCTTAAGGAACCGAAGCCGGAGGCTGCGGCGACGGTTGCATCGCTAGCT
GCATCGTCTAACGACGATGCAGACAATGCAGACGACTCGGTGATCAATGCAGGCAATCCAGAGAAGGAACTTGATTCCGA
TGTGCTGGAACAAGAACTCTCCAGCGAAGAACCGGAAGAAACAGCAAAACCAGATCACTCTCTCCGAGGCTTCTTCCGCA
CTGATTACTACCCAAATCGGTGGCAGAAGATCCTGTCGTTTGGCGGACGTGTCCGCATGAGCACTTCCCTGTTGTTGGGT
GCGCTGCTCTTGCTGTCACTATTTAAGGTCATGACTGTGGAACCAAGTGAGAATTGGCAAAACTCCAGTGGATGGCTGTC
ACCAAGCACTGCCACCTCAACTGCGGTGACCACCTCCGAAACTTCCGCGCCAGTAAGCACGCCTTCGATGACAGTGCCCA
CTACGGTGGAGGAGACCCCAACGATGGAATCTAGCGTCGAAACGCAGCAGGAAACCTCAACCCCTGCAACCGCAACGCCC
CAGCGAGCCGACACCATCGAACCGACCGAGGAAGCCACGTCGCAGGAGGAAACGACTGCGTCGCAGACGCAGTCTCCAGC
AGTGGGAGCACCAACCGCGGTCCAAGAGACAGTTGCGCCGACGTCCACCCCTTAG

Upstream 100 bases:

>100_bases
CTTCAGTTGAGGAATCAGGATTCTCACAAAGTTCGGGCAGGCTCCCGCTACTTTTCAGCGCTAATCTTGGCTCATGATTT
TAGGCGTACCCATTCAATAT

Downstream 100 bases:

>100_bases
GACGCTGATTACAGACGTGTCCCATTTCTTTACTACTATTGGAAATTATGAGTTCAGACGCAGAAAAGGCATCCGTGGAG
CTTTCCGAAAAATTTCACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MLYSLWNWIVDTGFDVTIILVLAFLIPRIGRLVMRIIKRRVESAADADTTKNQLAFAGVGVYIAQIVAFFMLTVSAMQAF
GFSLAGAAIPATIASAAIGLGAQSIVADFLAGFFILTEKQFGVGDWVRFEGNGIVVEGTVIEITMRATKIRTIAQETVII
PNSTAKVCINNSNNWSRAVVVIPIPMLGSENITDVIARSEAATRRALGQEKIAPEILGELDVHPATEVTPPTVVGMPWMV
TMRFLVQVTAGNQWLVERAIRTEIINEFWEEYGSATTTSGTLIDSLHVAHEEPKTSLIDASPQALKEPKPEAAATVASLA
ASSNDDADNADDSVINAGNPEKELDSDVLEQELSSEEPEETAKPDHSLRGFFRTDYYPNRWQKILSFGGRVRMSTSLLLG
ALLLLSLFKVMTVEPSENWQNSSGWLSPSTATSTAVTTSETSAPVSTPSMTVPTTVEETPTMESSVETQQETSTPATATP
QRADTIEPTEEATSQEETTASQTQSPAVGAPTAVQETVAPTSTP

Sequences:

>Translated_524_residues
MLYSLWNWIVDTGFDVTIILVLAFLIPRIGRLVMRIIKRRVESAADADTTKNQLAFAGVGVYIAQIVAFFMLTVSAMQAF
GFSLAGAAIPATIASAAIGLGAQSIVADFLAGFFILTEKQFGVGDWVRFEGNGIVVEGTVIEITMRATKIRTIAQETVII
PNSTAKVCINNSNNWSRAVVVIPIPMLGSENITDVIARSEAATRRALGQEKIAPEILGELDVHPATEVTPPTVVGMPWMV
TMRFLVQVTAGNQWLVERAIRTEIINEFWEEYGSATTTSGTLIDSLHVAHEEPKTSLIDASPQALKEPKPEAAATVASLA
ASSNDDADNADDSVINAGNPEKELDSDVLEQELSSEEPEETAKPDHSLRGFFRTDYYPNRWQKILSFGGRVRMSTSLLLG
ALLLLSLFKVMTVEPSENWQNSSGWLSPSTATSTAVTTSETSAPVSTPSMTVPTTVEETPTMESSVETQQETSTPATATP
QRADTIEPTEEATSQEETTASQTQSPAVGAPTAVQETVAPTSTP
>Mature_524_residues
MLYSLWNWIVDTGFDVTIILVLAFLIPRIGRLVMRIIKRRVESAADADTTKNQLAFAGVGVYIAQIVAFFMLTVSAMQAF
GFSLAGAAIPATIASAAIGLGAQSIVADFLAGFFILTEKQFGVGDWVRFEGNGIVVEGTVIEITMRATKIRTIAQETVII
PNSTAKVCINNSNNWSRAVVVIPIPMLGSENITDVIARSEAATRRALGQEKIAPEILGELDVHPATEVTPPTVVGMPWMV
TMRFLVQVTAGNQWLVERAIRTEIINEFWEEYGSATTTSGTLIDSLHVAHEEPKTSLIDASPQALKEPKPEAAATVASLA
ASSNDDADNADDSVINAGNPEKELDSDVLEQELSSEEPEETAKPDHSLRGFFRTDYYPNRWQKILSFGGRVRMSTSLLLG
ALLLLSLFKVMTVEPSENWQNSSGWLSPSTATSTAVTTSETSAPVSTPSMTVPTTVEETPTMESSVETQQETSTPATATP
QRADTIEPTEEATSQEETTASQTQSPAVGAPTAVQETVAPTSTP

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR006685 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 56326; Mature: 56326

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYSLWNWIVDTGFDVTIILVLAFLIPRIGRLVMRIIKRRVESAADADTTKNQLAFAGVG
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VYIAQIVAFFMLTVSAMQAFGFSLAGAAIPATIASAAIGLGAQSIVADFLAGFFILTEKQ
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCC
FGVGDWVRFEGNGIVVEGTVIEITMRATKIRTIAQETVIIPNSTAKVCINNSNNWSRAVV
CCCCCEEEECCCEEEEEEEEEEEEEHHHHHHHHHHHEEEECCCCEEEEECCCCCCCEEEE
VIPIPMLGSENITDVIARSEAATRRALGQEKIAPEILGELDVHPATEVTPPTVVGMPWMV
EEEECCCCCCCHHHHHHHHHHHHHHHHCHHHHCHHHHHCCCCCCCCCCCCCCEECCHHHH
TMRFLVQVTAGNQWLVERAIRTEIINEFWEEYGSATTTSGTLIDSLHVAHEEPKTSLIDA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEECC
SPQALKEPKPEAAATVASLAASSNDDADNADDSVINAGNPEKELDSDVLEQELSSEEPEE
CHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHH
TAKPDHSLRGFFRTDYYPNRWQKILSFGGRVRMSTSLLLGALLLLSLFKVMTVEPSENWQ
HCCCCHHHCCHHHCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NSSGWLSPSTATSTAVTTSETSAPVSTPSMTVPTTVEETPTMESSVETQQETSTPATATP
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
QRADTIEPTEEATSQEETTASQTQSPAVGAPTAVQETVAPTSTP
CCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MLYSLWNWIVDTGFDVTIILVLAFLIPRIGRLVMRIIKRRVESAADADTTKNQLAFAGVG
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VYIAQIVAFFMLTVSAMQAFGFSLAGAAIPATIASAAIGLGAQSIVADFLAGFFILTEKQ
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCC
FGVGDWVRFEGNGIVVEGTVIEITMRATKIRTIAQETVIIPNSTAKVCINNSNNWSRAVV
CCCCCEEEECCCEEEEEEEEEEEEEHHHHHHHHHHHEEEECCCCEEEEECCCCCCCEEEE
VIPIPMLGSENITDVIARSEAATRRALGQEKIAPEILGELDVHPATEVTPPTVVGMPWMV
EEEECCCCCCCHHHHHHHHHHHHHHHHCHHHHCHHHHHCCCCCCCCCCCCCCEECCHHHH
TMRFLVQVTAGNQWLVERAIRTEIINEFWEEYGSATTTSGTLIDSLHVAHEEPKTSLIDA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEECC
SPQALKEPKPEAAATVASLAASSNDDADNADDSVINAGNPEKELDSDVLEQELSSEEPEE
CHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHH
TAKPDHSLRGFFRTDYYPNRWQKILSFGGRVRMSTSLLLGALLLLSLFKVMTVEPSENWQ
HCCCCHHHCCHHHCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NSSGWLSPSTATSTAVTTSETSAPVSTPSMTVPTTVEETPTMESSVETQQETSTPATATP
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
QRADTIEPTEEATSQEETTASQTQSPAVGAPTAVQETVAPTSTP
CCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12948626; 8366043 [H]