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The map label for this gene is yfiY [H]

Identifier: 145295396

GI number: 145295396

Start: 1465179

End: 1466195

Strand: Direct

Name: yfiY [H]

Synonym: cgR_1334

Alternate gene names: 145295396

Gene position: 1465179-1466195 (Clockwise)

Preceding gene: 145295395

Following gene: 145295397

Centisome position: 44.21

GC content: 55.06

Gene sequence:

>1017_bases
ATGAAAAAGCGTGTCAGTTTATTTAAGTCAGCTGCATCGATTGTGGTGGTTGCGGGAATGGCGTTGGGTGTGGTGGGTTG
CTCATCGACCGAATTGGAGAGTGAATCTAGCGCTGACGTGACATCATCTGCCGATGGGGCATACCCAGTGTCTATCGCGA
CCAAATTCGGTGATGTCACTGTAGAAAGCCAACCAGAACGCGTCGTTGCCCTGGGTTGGGGAGATGCTGAGGCTGCGCTG
GAATTCGGTGTGCAGCCTGTGGGAGCATCAGATTGGCTCGCATTCGGTGGTGAAGGCGTGGGACCGTGGATTGAGGATTC
TGCCTACGATGAAGCGCCAGAAATCATCGGAACCATGGAACCGGAGTATGAAAAGATTGCAGCGCTTGAACCGGATCTGA
TTTTGGACGTGCGCAGCTCTGGCGACCAGGAACGCTATGACAAGTTGTCTTCAATCGCACCGACCATCGGCGTTCCAGAA
GGCGGCGATAGCTACCTCACCCCACGCGCTGAACAGGTAACCATGATCGCCACCGCTCTGGGTCAGGCAGAACGTGGTGA
AGAAGTGAATGCTGAGTACGAGCAGATCACCGCTGATATTCGTGCAGCTCACCCAGGCTGGTCTGAGAAGACCGCGGCTG
CTGTATCTGCAACGGCAACCAGCTGGGGTGCATACATCAAGGGCTCCAACCGTGTAGATACCTTGTTGGATCTGGGCTTC
CAGGAAAACCCTGAGCTGGCTAAACAGGAACCTGGCGATACGGGTTTCTCCATCAAATTCAGTGAAGAGACTTTCGGCGT
TGTGGATTCCGACCTGGTTGTCGGCTTTGCCATCGGTATGACTCCTGGGGAAATGGCAGAGCAGGTTCCATGGCAGATGT
TGACCGCCACTCGTGACGGCCGTTCCTTTGTGATGCCCCGTGAGATTTCCAATGCGTTTTCTTTGGGTTCCCCGCAGTCC
ACTCGGTTCGCGTTAGACGCCTTGGTGCCACTTCTGGAGGAGCATGCAGGGGAGTAG

Upstream 100 bases:

>100_bases
TCGCCTATTGGGGGTTATTTTCGATGCCCGATCACAGTACTCTCGAACAGGTTAGGTAAGGTTTGCATACTTTATTTTTA
TCCTGAAGGGACGGGCGCCA

Downstream 100 bases:

>100_bases
TGGTCCGGTGGTGCGGGCAGGGGGTAGCGGTCGAATTATTTGCCTGTGGGCATTATTTTGAGACAAAATAATAGAAACGT
CTCAGATGTTGGGAAGTTCT

Product: hypothetical protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MKKRVSLFKSAASIVVVAGMALGVVGCSSTELESESSADVTSSADGAYPVSIATKFGDVTVESQPERVVALGWGDAEAAL
EFGVQPVGASDWLAFGGEGVGPWIEDSAYDEAPEIIGTMEPEYEKIAALEPDLILDVRSSGDQERYDKLSSIAPTIGVPE
GGDSYLTPRAEQVTMIATALGQAERGEEVNAEYEQITADIRAAHPGWSEKTAAAVSATATSWGAYIKGSNRVDTLLDLGF
QENPELAKQEPGDTGFSIKFSEETFGVVDSDLVVGFAIGMTPGEMAEQVPWQMLTATRDGRSFVMPREISNAFSLGSPQS
TRFALDALVPLLEEHAGE

Sequences:

>Translated_338_residues
MKKRVSLFKSAASIVVVAGMALGVVGCSSTELESESSADVTSSADGAYPVSIATKFGDVTVESQPERVVALGWGDAEAAL
EFGVQPVGASDWLAFGGEGVGPWIEDSAYDEAPEIIGTMEPEYEKIAALEPDLILDVRSSGDQERYDKLSSIAPTIGVPE
GGDSYLTPRAEQVTMIATALGQAERGEEVNAEYEQITADIRAAHPGWSEKTAAAVSATATSWGAYIKGSNRVDTLLDLGF
QENPELAKQEPGDTGFSIKFSEETFGVVDSDLVVGFAIGMTPGEMAEQVPWQMLTATRDGRSFVMPREISNAFSLGSPQS
TRFALDALVPLLEEHAGE
>Mature_338_residues
MKKRVSLFKSAASIVVVAGMALGVVGCSSTELESESSADVTSSADGAYPVSIATKFGDVTVESQPERVVALGWGDAEAAL
EFGVQPVGASDWLAFGGEGVGPWIEDSAYDEAPEIIGTMEPEYEKIAALEPDLILDVRSSGDQERYDKLSSIAPTIGVPE
GGDSYLTPRAEQVTMIATALGQAERGEEVNAEYEQITADIRAAHPGWSEKTAAAVSATATSWGAYIKGSNRVDTLLDLGF
QENPELAKQEPGDTGFSIKFSEETFGVVDSDLVVGFAIGMTPGEMAEQVPWQMLTATRDGRSFVMPREISNAFSLGSPQS
TRFALDALVPLLEEHAGE

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 35769; Mature: 35769

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRVSLFKSAASIVVVAGMALGVVGCSSTELESESSADVTSSADGAYPVSIATKFGDVT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEE
VESQPERVVALGWGDAEAALEFGVQPVGASDWLAFGGEGVGPWIEDSAYDEAPEIIGTME
ECCCCCEEEEEECCCHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHCCCC
PEYEKIAALEPDLILDVRSSGDQERYDKLSSIAPTIGVPEGGDSYLTPRAEQVTMIATAL
CCHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
GQAERGEEVNAEYEQITADIRAAHPGWSEKTAAAVSATATSWGAYIKGSNRVDTLLDLGF
CCHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHCCC
QENPELAKQEPGDTGFSIKFSEETFGVVDSDLVVGFAIGMTPGEMAEQVPWQMLTATRDG
CCCCCHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHCCHHHHHCCCCC
RSFVMPREISNAFSLGSPQSTRFALDALVPLLEEHAGE
CEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKRVSLFKSAASIVVVAGMALGVVGCSSTELESESSADVTSSADGAYPVSIATKFGDVT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEE
VESQPERVVALGWGDAEAALEFGVQPVGASDWLAFGGEGVGPWIEDSAYDEAPEIIGTME
ECCCCCEEEEEECCCHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHCCCC
PEYEKIAALEPDLILDVRSSGDQERYDKLSSIAPTIGVPEGGDSYLTPRAEQVTMIATAL
CCHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
GQAERGEEVNAEYEQITADIRAAHPGWSEKTAAAVSATATSWGAYIKGSNRVDTLLDLGF
CCHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHCCC
QENPELAKQEPGDTGFSIKFSEETFGVVDSDLVVGFAIGMTPGEMAEQVPWQMLTATRDG
CCCCCHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHCCHHHHHCCCCC
RSFVMPREISNAFSLGSPQSTRFALDALVPLLEEHAGE
CEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]