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The map label for this gene is atpD

Identifier: 145295351

GI number: 145295351

Start: 1420456

End: 1421907

Strand: Direct

Name: atpD

Synonym: cgR_1290

Alternate gene names: 145295351

Gene position: 1420456-1421907 (Clockwise)

Preceding gene: 145295350

Following gene: 145295352

Centisome position: 42.86

GC content: 56.75

Gene sequence:

>1452_bases
ATGACTACAGCTCTTGAAGAGCAGAACGCACAGCAGGCAGCCACTGCCGGCCGTGTCGTGCGTGTCATTGGTGCGGTCGT
CGACGTGGAGTTTCCCCGCGGCGAGCTGCCAGCACTGTACAACGCACTTACTGTAGAGGTAACCCTCGAATCAGTTAAGA
AGACCGTTGTTCTCGAGGTTGCTCAGCACCTCGGCGACAACCTCATCCGCACCATCGCTATGGCACCAACCGACGGACTT
GTCCGCGGTGCTGCTGTAACCGATACTGCACGCCCAATTTCCGTACCAGTGGGCGATGTTGTTAAGGGCCACGTATTCAA
CGCTTTGGGCGACTGCCTAGACGACGTTTCCCTGAACAACAACCCAGAGATCGAGCGTTGGGGCATCCACCGCGAGCCAC
CATCATTCGATCAGCTTGAGGGTAAGACCGAGATCCTGGAAACAGGCATCAAGGTTATCGACCTTCTCACCCCTTACGTT
AAGGGTGGAAAGATCGGCCTCTTCGGTGGTGCAGGTGTGGGTAAGACCGTTCTTATCCAGGAAATGATCACCCGTATTGC
ACGTGAGTTCTCCGGTACTTCCGTGTTCGCAGGTGTTGGTGAGCGCACCCGTGAGGGCACCGACCTCTTCCTCGAAATGG
AAGAAATGGGCGTTCTCCAGGACACCGCCCTGGTGTTCGGTCAGATGGATGAGCCGCCAGGAGTCCGTATGCGCGTGGCT
CTGTCCGGCCTGACCATGGCGGAGTACTTCCGCGATGTTCAGAACCAGGACGTGCTGCTGTTCATCGACAACATCTTCCG
TTTCACCCAGGCAGGTTCTGAGGTTTCCACCCTTCTGGGTCGTATGCCTTCCGCCGTGGGTTACCAGCCAACCCTGGCTG
ACGAGATGGGTGTTCTCCAGGAGCGCATTACCTCCACCAAGGGCCGTTCGATTACCTCTCTGCAGGCCGTTTACGTTCCT
GCCGACGACTACACCGACCCGGCTCCAGCGACCACCTTCGCTCACTTGGATGCAACCACCGAGCTTGACCGCTCCATTGC
TTCCAAGGGTATTTACCCAGCAGTGAACCCACTGACCTCCACCTCTCGTATTCTCGAGCCAGCAATCGTTGGTGAGCGTC
ACTACGAGGTTTCTCAGCGTGTCATCGGCATTCTGCAGAAGAACAAGGAACTTCAGGACATCATCGCCATCCTTGGTATG
GACGAGCTTTCTGAAGAGGACAAGATCACCGTTGCTCGCGCACGTCGCATCGAGCGCTTCCTGGGTCAGAACTTCTTCGT
TGCAGAGAAGTTCACCGGTCTTCCTGGCTCCTACGTGCCACTGACCGACACCGTCGACGCTTTCGAGCGCATTTGCAACG
GCGACTTCGACCACTACCCAGAGCAGGCTTTCAACGGCCTCGGTGGTTTGGACGATGTCGAAGCTGCATACAAGAAGCTG
ACCGGAAAGTAA

Upstream 100 bases:

>100_bases
GTGTGGCCAACCAGGCACGTCAGGCACAGATCACCCAGGAAATCACAGAGATTGTTGGTGGCGCAGGCGCGCTCGCCGAC
AGCGGAGAAAGTGACTAATT

Downstream 100 bases:

>100_bases
GGTAGAGACACATGGCTGAAATCACCGTTGAACTGGTGTCTGTAGAGCGCATGCTGTGGGCCGGCCAGGCCTCCATCGTG
ACTGCACAGACCACCGAGGG

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MTTALEEQNAQQAATAGRVVRVIGAVVDVEFPRGELPALYNALTVEVTLESVKKTVVLEVAQHLGDNLIRTIAMAPTDGL
VRGAAVTDTARPISVPVGDVVKGHVFNALGDCLDDVSLNNNPEIERWGIHREPPSFDQLEGKTEILETGIKVIDLLTPYV
KGGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTALVFGQMDEPPGVRMRVA
LSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERITSTKGRSITSLQAVYVP
ADDYTDPAPATTFAHLDATTELDRSIASKGIYPAVNPLTSTSRILEPAIVGERHYEVSQRVIGILQKNKELQDIIAILGM
DELSEEDKITVARARRIERFLGQNFFVAEKFTGLPGSYVPLTDTVDAFERICNGDFDHYPEQAFNGLGGLDDVEAAYKKL
TGK

Sequences:

>Translated_483_residues
MTTALEEQNAQQAATAGRVVRVIGAVVDVEFPRGELPALYNALTVEVTLESVKKTVVLEVAQHLGDNLIRTIAMAPTDGL
VRGAAVTDTARPISVPVGDVVKGHVFNALGDCLDDVSLNNNPEIERWGIHREPPSFDQLEGKTEILETGIKVIDLLTPYV
KGGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTALVFGQMDEPPGVRMRVA
LSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERITSTKGRSITSLQAVYVP
ADDYTDPAPATTFAHLDATTELDRSIASKGIYPAVNPLTSTSRILEPAIVGERHYEVSQRVIGILQKNKELQDIIAILGM
DELSEEDKITVARARRIERFLGQNFFVAEKFTGLPGSYVPLTDTVDAFERICNGDFDHYPEQAFNGLGGLDDVEAAYKKL
TGK
>Mature_482_residues
TTALEEQNAQQAATAGRVVRVIGAVVDVEFPRGELPALYNALTVEVTLESVKKTVVLEVAQHLGDNLIRTIAMAPTDGLV
RGAAVTDTARPISVPVGDVVKGHVFNALGDCLDDVSLNNNPEIERWGIHREPPSFDQLEGKTEILETGIKVIDLLTPYVK
GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTALVFGQMDEPPGVRMRVAL
SGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERITSTKGRSITSLQAVYVPA
DDYTDPAPATTFAHLDATTELDRSIASKGIYPAVNPLTSTSRILEPAIVGERHYEVSQRVIGILQKNKELQDIIAILGMD
ELSEEDKITVARARRIERFLGQNFFVAEKFTGLPGSYVPLTDTVDAFERICNGDFDHYPEQAFNGLGGLDDVEAAYKKLT
GK

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family

Homologues:

Organism=Homo sapiens, GI32189394, Length=478, Percent_Identity=61.0878661087866, Blast_Score=558, Evalue=1e-159,
Organism=Homo sapiens, GI19913424, Length=327, Percent_Identity=28.1345565749235, Blast_Score=123, Evalue=5e-28,
Organism=Homo sapiens, GI19913428, Length=361, Percent_Identity=24.0997229916898, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI19913426, Length=362, Percent_Identity=24.0331491712707, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI50345984, Length=300, Percent_Identity=25.3333333333333, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI4757810, Length=300, Percent_Identity=25.3333333333333, Blast_Score=79, Evalue=9e-15,
Organism=Escherichia coli, GI1790170, Length=464, Percent_Identity=62.0689655172414, Blast_Score=567, Evalue=1e-163,
Organism=Escherichia coli, GI1788251, Length=340, Percent_Identity=30, Blast_Score=118, Evalue=9e-28,
Organism=Escherichia coli, GI1790172, Length=320, Percent_Identity=25.3125, Blast_Score=92, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI25144756, Length=473, Percent_Identity=60.8879492600423, Blast_Score=547, Evalue=1e-156,
Organism=Caenorhabditis elegans, GI17565854, Length=329, Percent_Identity=29.1793313069909, Blast_Score=127, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI17570191, Length=360, Percent_Identity=24.1666666666667, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17510931, Length=348, Percent_Identity=23.5632183908046, Blast_Score=98, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI71988063, Length=301, Percent_Identity=25.5813953488372, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI71988080, Length=301, Percent_Identity=25.5813953488372, Blast_Score=75, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6322581, Length=469, Percent_Identity=62.4733475479744, Blast_Score=570, Evalue=1e-163,
Organism=Saccharomyces cerevisiae, GI6319603, Length=421, Percent_Identity=26.1282660332542, Blast_Score=110, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6320016, Length=277, Percent_Identity=26.3537906137184, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6319370, Length=373, Percent_Identity=25.201072386059, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24638766, Length=463, Percent_Identity=62.6349892008639, Blast_Score=550, Evalue=1e-157,
Organism=Drosophila melanogaster, GI28574560, Length=471, Percent_Identity=60.2972399150743, Blast_Score=525, Evalue=1e-149,
Organism=Drosophila melanogaster, GI20129479, Length=350, Percent_Identity=29.1428571428571, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24583988, Length=365, Percent_Identity=26.8493150684932, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24583986, Length=365, Percent_Identity=26.8493150684932, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24583984, Length=365, Percent_Identity=26.8493150684932, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24583992, Length=339, Percent_Identity=26.5486725663717, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI281361666, Length=364, Percent_Identity=25, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24646341, Length=364, Percent_Identity=25, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI17136796, Length=364, Percent_Identity=25, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24638768, Length=94, Percent_Identity=52.1276595744681, Blast_Score=86, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24658560, Length=300, Percent_Identity=26.6666666666667, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): ATPB_CORGB (A4QDH3)

Other databases:

- EMBL:   AP009044
- RefSeq:   YP_001138172.1
- ProteinModelPortal:   A4QDH3
- SMR:   A4QDH3
- STRING:   A4QDH3
- GeneID:   4993171
- GenomeReviews:   AP009044_GR
- KEGG:   cgt:cgR_1290
- eggNOG:   COG0055
- HOGENOM:   HBG565875
- OMA:   HYKTARA
- ProtClustDB:   PRK09280
- HAMAP:   MF_01347
- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100
- PANTHER:   PTHR15184:SF8
- SMART:   SM00382
- TIGRFAMs:   TIGR01039

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N; SSF47917 ATPase_a/b_C; SSF50615 ATPase_a/b_N

EC number: =3.6.3.14

Molecular weight: Translated: 52552; Mature: 52421

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTALEEQNAQQAATAGRVVRVIGAVVDVEFPRGELPALYNALTVEVTLESVKKTVVLEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEHHHHHHHHHHHH
AQHLGDNLIRTIAMAPTDGLVRGAAVTDTARPISVPVGDVVKGHVFNALGDCLDDVSLNN
HHHHHHHHHHHHHCCCCCCHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
NPEIERWGIHREPPSFDQLEGKTEILETGIKVIDLLTPYVKGGKIGLFGGAGVGKTVLIQ
CCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
EMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTALVFGQMDEPPGVRMRVA
HHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEHHHCCCHHHHHHHHCCCCCCCCCEEEEE
LSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQ
ECCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHHHHHHCCCHHCCCCCCHHHHHHHHH
ERITSTKGRSITSLQAVYVPADDYTDPAPATTFAHLDATTELDRSIASKGIYPAVNPLTS
HHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCH
TSRILEPAIVGERHYEVSQRVIGILQKNKELQDIIAILGMDELSEEDKITVARARRIERF
HHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHH
LGQNFFVAEKFTGLPGSYVPLTDTVDAFERICNGDFDHYPEQAFNGLGGLDDVEAAYKKL
HCCCEEEEHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHH
TGK
CCC
>Mature Secondary Structure 
TTALEEQNAQQAATAGRVVRVIGAVVDVEFPRGELPALYNALTVEVTLESVKKTVVLEV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEHHHHHHHHHHHH
AQHLGDNLIRTIAMAPTDGLVRGAAVTDTARPISVPVGDVVKGHVFNALGDCLDDVSLNN
HHHHHHHHHHHHHCCCCCCHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
NPEIERWGIHREPPSFDQLEGKTEILETGIKVIDLLTPYVKGGKIGLFGGAGVGKTVLIQ
CCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
EMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTALVFGQMDEPPGVRMRVA
HHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEHHHCCCHHHHHHHHCCCCCCCCCEEEEE
LSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQ
ECCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHHHHHHCCCHHCCCCCCHHHHHHHHH
ERITSTKGRSITSLQAVYVPADDYTDPAPATTFAHLDATTELDRSIASKGIYPAVNPLTS
HHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCH
TSRILEPAIVGERHYEVSQRVIGILQKNKELQDIIAILGMDELSEEDKITVARARRIERF
HHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHH
LGQNFFVAEKFTGLPGSYVPLTDTVDAFERICNGDFDHYPEQAFNGLGGLDDVEAAYKKL
HCCCEEEEHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHH
TGK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA