| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145295324
Identifier: 145295324
GI number: 145295324
Start: 1387603
End: 1388295
Strand: Reverse
Name: 145295324
Synonym: cgR_1264
Alternate gene names: NA
Gene position: 1388295-1387603 (Counterclockwise)
Preceding gene: 145295325
Following gene: 145295321
Centisome position: 41.89
GC content: 57.72
Gene sequence:
>693_bases GTGACCACACAAACCGCCCCTACCGCAGCCACCGATCTTTTTGCCGAGTCCTACAAACTCAGCCCAAAGCAGCGCGAAGT TTTAGATGCCCTACAAACCTTCCCTGACGGTGCCCGCGCGATCGATGTCGCCAAAAAACTCGACCTTCACGTCAACACCG CCCGCGGCCACCTCGAAGAACTCGTAGCAAAAGAAGCCATCCGAGTAGTCACCGCAGCAGCCAAAGGTCGCGGACGCCCC TCCCTCATCTTCCAAACACGCGTCCCCGACAACCGCGCTGTCGCCAAAGAATACATCACCCTGATCGAACTCATGGCCAA CATGCTCGGCGATGTCGACGATGACGCAATGCACAACCCCGAACTCCGCGCCAAAGCACTTTCCATCGGAACCCAGTGGG CACACGTCATGGGCATTAAACACGCCGAAGCCGAAGACCTCGACGAAGCCCTCTCCCCGCTCATTAACCGCCTCCGCGAA ATGGGCTTTGACCCCACCGAAACCGAAGAAGCAAACTCCCTCGCTCTCCACAGCTGCCCATTTGTGGTCAACGACAAACG CCCATCAGCCTTCGTCTGCGCCATCCACGCCGGATTCATCCAAGAAAGCCTCGGTGAAAACAACCGCATCCAGCTGGAAC TCAAACCACTCAACGCGCCGGGCACCTGTAAGGTTCACGTGTTCAGCGAGTAA
Upstream 100 bases:
>100_bases TGGTATGATTCCCTTTATTTAATTAATCAACTAACACACTTTTCTCCATAACATCTGCTAAGCACCGATACGAGGAGAAC CCCACCAGAGCGAGCCCGAC
Downstream 100 bases:
>100_bases TTCAGCCACTAAGAAGGCCCCCTTCTCGATCGAAGGGGGCCTTCTTAGTGGCACTACGGCTGGTTGACCTCAACCTTGAC TGGTCCAGCAACCTCGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: ArsR Family Transcriptional Regulator; SufR Family Transcriptional Regulator
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTTQTAPTAATDLFAESYKLSPKQREVLDALQTFPDGARAIDVAKKLDLHVNTARGHLEELVAKEAIRVVTAAAKGRGRP SLIFQTRVPDNRAVAKEYITLIELMANMLGDVDDDAMHNPELRAKALSIGTQWAHVMGIKHAEAEDLDEALSPLINRLRE MGFDPTETEEANSLALHSCPFVVNDKRPSAFVCAIHAGFIQESLGENNRIQLELKPLNAPGTCKVHVFSE
Sequences:
>Translated_230_residues MTTQTAPTAATDLFAESYKLSPKQREVLDALQTFPDGARAIDVAKKLDLHVNTARGHLEELVAKEAIRVVTAAAKGRGRP SLIFQTRVPDNRAVAKEYITLIELMANMLGDVDDDAMHNPELRAKALSIGTQWAHVMGIKHAEAEDLDEALSPLINRLRE MGFDPTETEEANSLALHSCPFVVNDKRPSAFVCAIHAGFIQESLGENNRIQLELKPLNAPGTCKVHVFSE >Mature_229_residues TTQTAPTAATDLFAESYKLSPKQREVLDALQTFPDGARAIDVAKKLDLHVNTARGHLEELVAKEAIRVVTAAAKGRGRPS LIFQTRVPDNRAVAKEYITLIELMANMLGDVDDDAMHNPELRAKALSIGTQWAHVMGIKHAEAEDLDEALSPLINRLREM GFDPTETEEANSLALHSCPFVVNDKRPSAFVCAIHAGFIQESLGENNRIQLELKPLNAPGTCKVHVFSE
Specific function: Unknown
COG id: COG2345
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25232; Mature: 25101
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQTAPTAATDLFAESYKLSPKQREVLDALQTFPDGARAIDVAKKLDLHVNTARGHLEE CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCEEEEHHHHHHHH LVAKEAIRVVTAAAKGRGRPSLIFQTRVPDNRAVAKEYITLIELMANMLGDVDDDAMHNP HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ELRAKALSIGTQWAHVMGIKHAEAEDLDEALSPLINRLREMGFDPTETEEANSLALHSCP HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC FVVNDKRPSAFVCAIHAGFIQESLGENNRIQLELKPLNAPGTCKVHVFSE EEEECCCCCEEEEEHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEECC >Mature Secondary Structure TTQTAPTAATDLFAESYKLSPKQREVLDALQTFPDGARAIDVAKKLDLHVNTARGHLEE CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCEEEEHHHHHHHH LVAKEAIRVVTAAAKGRGRPSLIFQTRVPDNRAVAKEYITLIELMANMLGDVDDDAMHNP HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ELRAKALSIGTQWAHVMGIKHAEAEDLDEALSPLINRLREMGFDPTETEEANSLALHSCP HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC FVVNDKRPSAFVCAIHAGFIQESLGENNRIQLELKPLNAPGTCKVHVFSE EEEECCCCCEEEEEHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA