| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yejH [H]
Identifier: 145295294
GI number: 145295294
Start: 1346521
End: 1349436
Strand: Reverse
Name: yejH [H]
Synonym: cgR_1234
Alternate gene names: 145295294
Gene position: 1349436-1346521 (Counterclockwise)
Preceding gene: 145295295
Following gene: 145295293
Centisome position: 40.72
GC content: 47.15
Gene sequence:
>2916_bases ATGAGCCCATTCGATTCAAAGCTTGGTCGCGATACCCATTTTGGATTCCTCGATAAGACCACTGCTTCGCAACAACTGCT GAATCCTTCATTGATTTCTAATGAGGATCCGCACACCATGTTGCAGGCGATCAAGTTAGAGCTTCGCACCGCACAGTCTT TTACATTTTCAGTCGCTTTCATTTCCAGTCGCGGTATCGCGTTGTTGAAACAGGCATTGTTGGACTTCAAGGGTAAAGGA CGAATTATCACGTCCCGCTACCTGGATTTCAATGATCCAACGATGTTTCGTGAGCTTCTTACTTTGGAGAACGTGGAAGT CCTCATACATCACGGTGATGGTTTCCACTCCAAGGGCTACGTTTTCCATCACGACGTGGGAATCACCGCAGTAGTGGGTA GTTCCAACCTCACAGATAATGCTCTGTTGGTAAACCGGGAATGGAATCTGAAGTTCTCTGCCAGCAAGAATGGCGACATT GCTTTTCAACTTGATGATGCGATTAATCGCCAAATTGAACGATCCACGCCACTGACGCCTGAATGGATCTCAGAGTATGA GGCAACCAAACGTGTACCTGAGCGTTTGGTGTCTCAGAATATTCCTCTCGAGGATCAAAGTGACGCCGGAACAATTGTTC CAAACGTCATGCAGGAAGAGGCTCTCGACGCTCTACTTTCTTTGACGGAGAAGGGAGAGAAACGTGGCGTCATTATCTCT GCGACAGGAACTGGCAAGACTATCCTGGCTGCTCTAGCTACAAGAATGCTCAAGCCTGAACGAGTTTTGTTTGTCGTGCA CCGCGAACAAATTCTGGATAAGGCGCGATCCGAGTTCATCAAAGTTCTTGAACGTCCCGCTGCTGATTTCGGAAAAATGT CTGGCTCGACCAAGGAGCTAGATAAGCCGTTTGTGTTTGGCACCATCCAAACGCTGACAAAGGAAGCTATACTTTCCCAG ATCTCCCCTACTGACTTTGATTTAGTCATCGTCGATGAAGTCCATCGCGCCGGTGCCGAATCCTATTTGGCATTGCTCAA TCATCTGCAGCCACAGTTTTTATTGGGCCTGACTGCTACCCCAGAGCGAACTGATGGATTCAATATTTATGAGTTGTTCG ATTTCAACGTGCCATATGAGATCCGACTTCAAGCTGCTTTAGAATCCAACATGCTCGTACCGTTTCACTATTACGGTGTC ACAGACTTCACGCTTGATTCTGAAACAACGGTGACTGATACCTCCAAACTAAGTGCCTTGGTGAGCGAAGAGAGAGTCCA TCACATTCTGGAGGCCCTCAAAACCTATGGTCATCCAGAAAATGTTCGTGGACTGATCTTCTGTTCCAAGACTGAAGAGG CTGAGGAGCTGTCAAAACTTCTCAACCAGTCGTTGTTTAATGGCAACTTGCTTAAAACCAAGGCGCTCTCTGCGAAGGAC TCAATTCCCTACCGCGAAGAGGTTGTAGCTGAGCTGGAGTCCGGCGACCTGGACTACATCTTGACGGTTGACATCTTCAA TGAAGGCATTGATATTCCTTCGGTGAATCAAATCGTAATGATTCGTAGTACTCAATCAAGCATTGTGTTTACGCAGCAGC TCGGGCGTGGACTCCGAAAAGCTGCTGGCAAAGACCATCTGCGCGTTATTGATTTCATTGGCAACTACGCGAACAACTAT CTCATTCCCATCGCATTGTTTGGCGATAATTCTCGCAATAAGAACAGCATCAGACGCCGCCTGATTGAGAGCGATATTGA TGGAACGATCTCAGGTGTTTCAAGTGTTAACTTCGATCCCATCGCACAGGAGAGAATTTTTGCTGCGTTGAAGGCTGCGA AGTTGGACTCAAAAGCACAATTCAAGCAGGATATTGTTCAGCTTCAAGATCGACTCAATCATGTGCCAGCACTGTTAGAC TTCGCTCGCTTCAATACTGTTGATCCGTTTATCCTTGCCACGCATTCTGGCAACTACTGGTCGCTGCTCAGTTCAGTGAA GTTTGTCGATCACGCTCCCAGCGAATCGGAGAAGTACTTTCTGGATTTCCTTACCGGAGAGCTTCTTAACGGCAAGCGAC CTCATGAGCTGTTGCTGATCCAGGAACTAATGAAACAGCCTGAAACTTCTACTGAAGAATTCCGTAAGCTCTTGCAGGCC CAATCGACTAGTTCAGATGAGCAAACAATCAACTCGGTTGAAAGAATTTTGAGCCAAGAATTCTATACGGGACCAAACCG CAAGAAGTTTGGCGAACATCCGATCCTCTCTGTTCAAAACAGCACCTACTCTTTTACTCCCGAGTTCCGACGTGCCCTCG ACGAAAGCCTAGAAGTGACGGACCGAGATGAGGCTGCTCAGAATTTTAAGTTTCACGTCCAAGACATCATCGACACTGGT TTGTTTATCGCCAGAAACAATGGATTTTGGCAGGGAAACCTCGTTGTTGGCGAGAGATACTCCCGACGAGATGTCTGCCG AATTCTCAATTGGGAACGAAACAACGAGAGCACGATTTATGGATACAAAGTGGACAGTTACACATCTACTTGCCCAATCT TTGTGACCTATCACAAGGCTGATGATGTATCCGAAAGTACTCGTTACCAGGATGAACTCGTCGATCCGAATACCCTTCAT TGGTATTCCCGCGGCAACCGAAAGATCACGTCTAATGAGATCAAGCCCATCGCTGCGAATGCTGTGGATCTTCATGTTTT TGTGAAGAAGGACGATGCCGAAGGCCTTGATTTCTTCTACCTTGGTCAAGCGCATTCAGAAAACAGCAAACAGTCATCGA TGCCCGGAAACAAAGGAGTTGTGCAACCGGTGGTCACAATGGATCTTCAGTTCGACACACCCGTCGAACAAAGCCTGTTT GAGTACCTGAGCACAAATCTCGCAATAACGGAGTAA
Upstream 100 bases:
>100_bases ATGCTGAGATCCGCTGGGTGGCACCACACGAATTGGAATCTTTGGAGTGGGCACCTGCTGATATTCCTGCGGTGAAACTT CTCGTCGAGCAGCTTGCTTA
Downstream 100 bases:
>100_bases CCACCGCAACCAAGCGTCGAAAAGCAAAATCTTTTCGGCGCTTTTTGGTGACTCGTCAACAAGGGGGAGCAAAATCAGCC ATTGCCAGGAAAAGGTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 971; Mature: 970
Protein sequence:
>971_residues MSPFDSKLGRDTHFGFLDKTTASQQLLNPSLISNEDPHTMLQAIKLELRTAQSFTFSVAFISSRGIALLKQALLDFKGKG RIITSRYLDFNDPTMFRELLTLENVEVLIHHGDGFHSKGYVFHHDVGITAVVGSSNLTDNALLVNREWNLKFSASKNGDI AFQLDDAINRQIERSTPLTPEWISEYEATKRVPERLVSQNIPLEDQSDAGTIVPNVMQEEALDALLSLTEKGEKRGVIIS ATGTGKTILAALATRMLKPERVLFVVHREQILDKARSEFIKVLERPAADFGKMSGSTKELDKPFVFGTIQTLTKEAILSQ ISPTDFDLVIVDEVHRAGAESYLALLNHLQPQFLLGLTATPERTDGFNIYELFDFNVPYEIRLQAALESNMLVPFHYYGV TDFTLDSETTVTDTSKLSALVSEERVHHILEALKTYGHPENVRGLIFCSKTEEAEELSKLLNQSLFNGNLLKTKALSAKD SIPYREEVVAELESGDLDYILTVDIFNEGIDIPSVNQIVMIRSTQSSIVFTQQLGRGLRKAAGKDHLRVIDFIGNYANNY LIPIALFGDNSRNKNSIRRRLIESDIDGTISGVSSVNFDPIAQERIFAALKAAKLDSKAQFKQDIVQLQDRLNHVPALLD FARFNTVDPFILATHSGNYWSLLSSVKFVDHAPSESEKYFLDFLTGELLNGKRPHELLLIQELMKQPETSTEEFRKLLQA QSTSSDEQTINSVERILSQEFYTGPNRKKFGEHPILSVQNSTYSFTPEFRRALDESLEVTDRDEAAQNFKFHVQDIIDTG LFIARNNGFWQGNLVVGERYSRRDVCRILNWERNNESTIYGYKVDSYTSTCPIFVTYHKADDVSESTRYQDELVDPNTLH WYSRGNRKITSNEIKPIAANAVDLHVFVKKDDAEGLDFFYLGQAHSENSKQSSMPGNKGVVQPVVTMDLQFDTPVEQSLF EYLSTNLAITE
Sequences:
>Translated_971_residues MSPFDSKLGRDTHFGFLDKTTASQQLLNPSLISNEDPHTMLQAIKLELRTAQSFTFSVAFISSRGIALLKQALLDFKGKG RIITSRYLDFNDPTMFRELLTLENVEVLIHHGDGFHSKGYVFHHDVGITAVVGSSNLTDNALLVNREWNLKFSASKNGDI AFQLDDAINRQIERSTPLTPEWISEYEATKRVPERLVSQNIPLEDQSDAGTIVPNVMQEEALDALLSLTEKGEKRGVIIS ATGTGKTILAALATRMLKPERVLFVVHREQILDKARSEFIKVLERPAADFGKMSGSTKELDKPFVFGTIQTLTKEAILSQ ISPTDFDLVIVDEVHRAGAESYLALLNHLQPQFLLGLTATPERTDGFNIYELFDFNVPYEIRLQAALESNMLVPFHYYGV TDFTLDSETTVTDTSKLSALVSEERVHHILEALKTYGHPENVRGLIFCSKTEEAEELSKLLNQSLFNGNLLKTKALSAKD SIPYREEVVAELESGDLDYILTVDIFNEGIDIPSVNQIVMIRSTQSSIVFTQQLGRGLRKAAGKDHLRVIDFIGNYANNY LIPIALFGDNSRNKNSIRRRLIESDIDGTISGVSSVNFDPIAQERIFAALKAAKLDSKAQFKQDIVQLQDRLNHVPALLD FARFNTVDPFILATHSGNYWSLLSSVKFVDHAPSESEKYFLDFLTGELLNGKRPHELLLIQELMKQPETSTEEFRKLLQA QSTSSDEQTINSVERILSQEFYTGPNRKKFGEHPILSVQNSTYSFTPEFRRALDESLEVTDRDEAAQNFKFHVQDIIDTG LFIARNNGFWQGNLVVGERYSRRDVCRILNWERNNESTIYGYKVDSYTSTCPIFVTYHKADDVSESTRYQDELVDPNTLH WYSRGNRKITSNEIKPIAANAVDLHVFVKKDDAEGLDFFYLGQAHSENSKQSSMPGNKGVVQPVVTMDLQFDTPVEQSLF EYLSTNLAITE >Mature_970_residues SPFDSKLGRDTHFGFLDKTTASQQLLNPSLISNEDPHTMLQAIKLELRTAQSFTFSVAFISSRGIALLKQALLDFKGKGR IITSRYLDFNDPTMFRELLTLENVEVLIHHGDGFHSKGYVFHHDVGITAVVGSSNLTDNALLVNREWNLKFSASKNGDIA FQLDDAINRQIERSTPLTPEWISEYEATKRVPERLVSQNIPLEDQSDAGTIVPNVMQEEALDALLSLTEKGEKRGVIISA TGTGKTILAALATRMLKPERVLFVVHREQILDKARSEFIKVLERPAADFGKMSGSTKELDKPFVFGTIQTLTKEAILSQI SPTDFDLVIVDEVHRAGAESYLALLNHLQPQFLLGLTATPERTDGFNIYELFDFNVPYEIRLQAALESNMLVPFHYYGVT DFTLDSETTVTDTSKLSALVSEERVHHILEALKTYGHPENVRGLIFCSKTEEAEELSKLLNQSLFNGNLLKTKALSAKDS IPYREEVVAELESGDLDYILTVDIFNEGIDIPSVNQIVMIRSTQSSIVFTQQLGRGLRKAAGKDHLRVIDFIGNYANNYL IPIALFGDNSRNKNSIRRRLIESDIDGTISGVSSVNFDPIAQERIFAALKAAKLDSKAQFKQDIVQLQDRLNHVPALLDF ARFNTVDPFILATHSGNYWSLLSSVKFVDHAPSESEKYFLDFLTGELLNGKRPHELLLIQELMKQPETSTEEFRKLLQAQ STSSDEQTINSVERILSQEFYTGPNRKKFGEHPILSVQNSTYSFTPEFRRALDESLEVTDRDEAAQNFKFHVQDIIDTGL FIARNNGFWQGNLVVGERYSRRDVCRILNWERNNESTIYGYKVDSYTSTCPIFVTYHKADDVSESTRYQDELVDPNTLHW YSRGNRKITSNEIKPIAANAVDLHVFVKKDDAEGLDFFYLGQAHSENSKQSSMPGNKGVVQPVVTMDLQFDTPVEQSLFE YLSTNLAITE
Specific function: Unknown
COG id: COG1061
COG function: function code KL; DNA or RNA helicases of superfamily II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788511, Length=383, Percent_Identity=27.4151436031332, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6320539, Length=422, Percent_Identity=25.5924170616114, Blast_Score=124, Evalue=8e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR006935 [H]
Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]
EC number: NA
Molecular weight: Translated: 109470; Mature: 109339
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPFDSKLGRDTHFGFLDKTTASQQLLNPSLISNEDPHTMLQAIKLELRTAQSFTFSVAF CCCCCHHCCCCCCCCCCCCCCHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEE ISSRGIALLKQALLDFKGKGRIITSRYLDFNDPTMFRELLTLENVEVLIHHGDGFHSKGY ECCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCCCCE VFHHDVGITAVVGSSNLTDNALLVNREWNLKFSASKNGDIAFQLDDAINRQIERSTPLTP EEEECCCEEEEECCCCCCCCEEEEEECCCEEEECCCCCCEEEEECHHHHHHHHCCCCCCH EWISEYEATKRVPERLVSQNIPLEDQSDAGTIVPNVMQEEALDALLSLTEKGEKRGVIIS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE ATGTGKTILAALATRMLKPERVLFVVHREQILDKARSEFIKVLERPAADFGKMSGSTKEL ECCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHC DKPFVFGTIQTLTKEAILSQISPTDFDLVIVDEVHRAGAESYLALLNHLQPQFLLGLTAT CCCEEEHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCHHHHHHHHHCCCCCCEEEECCC PERTDGFNIYELFDFNVPYEIRLQAALESNMLVPFHYYGVTDFTLDSETTVTDTSKLSAL CCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCEEEEECCCCEECCHHHHHHH VSEERVHHILEALKTYGHPENVRGLIFCSKTEEAEELSKLLNQSLFNGNLLKTKALSAKD HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC SIPYREEVVAELESGDLDYILTVDIFNEGIDIPSVNQIVMIRSTQSSIVFTQQLGRGLRK CCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHHH AAGKDHLRVIDFIGNYANNYLIPIALFGDNSRNKNSIRRRLIESDIDGTISGVSSVNFDP HCCCCCEEHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC IAQERIFAALKAAKLDSKAQFKQDIVQLQDRLNHVPALLDFARFNTVDPFILATHSGNYW HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH SLLSSVKFVDHAPSESEKYFLDFLTGELLNGKRPHELLLIQELMKQPETSTEEFRKLLQA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH QSTSSDEQTINSVERILSQEFYTGPNRKKFGEHPILSVQNSTYSFTPEFRRALDESLEVT HCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEECHHHHHHHHHHCCCC DRDEAAQNFKFHVQDIIDTGLFIARNNGFWQGNLVVGERYSRRDVCRILNWERNNESTIY CCHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCEEE GYKVDSYTSTCPIFVTYHKADDVSESTRYQDELVDPNTLHWYSRGNRKITSNEIKPIAAN EEEECCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCEEECCCCCEEECC AVDLHVFVKKDDAEGLDFFYLGQAHSENSKQSSMPGNKGVVQPVVTMDLQFDTPVEQSLF EEEEEEEEEECCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCEEEEEEEECCCCHHHHHH EYLSTNLAITE HHHHCCCEECC >Mature Secondary Structure SPFDSKLGRDTHFGFLDKTTASQQLLNPSLISNEDPHTMLQAIKLELRTAQSFTFSVAF CCCCHHCCCCCCCCCCCCCCHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEE ISSRGIALLKQALLDFKGKGRIITSRYLDFNDPTMFRELLTLENVEVLIHHGDGFHSKGY ECCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCCCCE VFHHDVGITAVVGSSNLTDNALLVNREWNLKFSASKNGDIAFQLDDAINRQIERSTPLTP EEEECCCEEEEECCCCCCCCEEEEEECCCEEEECCCCCCEEEEECHHHHHHHHCCCCCCH EWISEYEATKRVPERLVSQNIPLEDQSDAGTIVPNVMQEEALDALLSLTEKGEKRGVIIS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE ATGTGKTILAALATRMLKPERVLFVVHREQILDKARSEFIKVLERPAADFGKMSGSTKEL ECCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHC DKPFVFGTIQTLTKEAILSQISPTDFDLVIVDEVHRAGAESYLALLNHLQPQFLLGLTAT CCCEEEHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCHHHHHHHHHCCCCCCEEEECCC PERTDGFNIYELFDFNVPYEIRLQAALESNMLVPFHYYGVTDFTLDSETTVTDTSKLSAL CCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCEEEEECCCCEECCHHHHHHH VSEERVHHILEALKTYGHPENVRGLIFCSKTEEAEELSKLLNQSLFNGNLLKTKALSAKD HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC SIPYREEVVAELESGDLDYILTVDIFNEGIDIPSVNQIVMIRSTQSSIVFTQQLGRGLRK CCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHHH AAGKDHLRVIDFIGNYANNYLIPIALFGDNSRNKNSIRRRLIESDIDGTISGVSSVNFDP HCCCCCEEHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC IAQERIFAALKAAKLDSKAQFKQDIVQLQDRLNHVPALLDFARFNTVDPFILATHSGNYW HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH SLLSSVKFVDHAPSESEKYFLDFLTGELLNGKRPHELLLIQELMKQPETSTEEFRKLLQA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH QSTSSDEQTINSVERILSQEFYTGPNRKKFGEHPILSVQNSTYSFTPEFRRALDESLEVT HCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEECHHHHHHHHHHCCCC DRDEAAQNFKFHVQDIIDTGLFIARNNGFWQGNLVVGERYSRRDVCRILNWERNNESTIY CCHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCEEE GYKVDSYTSTCPIFVTYHKADDVSESTRYQDELVDPNTLHWYSRGNRKITSNEIKPIAAN EEEECCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCEEECCCCCEEECC AVDLHVFVKKDDAEGLDFFYLGQAHSENSKQSSMPGNKGVVQPVVTMDLQFDTPVEQSLF EEEEEEEEEECCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCEEEEEEEECCCCHHHHHH EYLSTNLAITE HHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]