Click here to switch to the map view.

The map label for this gene is scrB [H]

Identifier: 145295259

GI number: 145295259

Start: 1303222

End: 1304718

Strand: Reverse

Name: scrB [H]

Synonym: cgR_1200

Alternate gene names: 145295259

Gene position: 1304718-1303222 (Counterclockwise)

Preceding gene: 145295260

Following gene: 145295250

Centisome position: 39.37

GC content: 54.31

Gene sequence:

>1497_bases
ATGGCGAACGTTTCCGGGTATCACCGACCAGAGCTGCACATCACCGCTGAGAGTGGTGTTTTGTTTGCACCTGCAGGCGT
TCTATTGGATGACGACACGTGGCATTTCTTCCACCAGTACCGTCCCTCACCAGATCACGGCCCCAGGTGGGCACACCAAT
TCGCAGAGCGCACTCCATTTGTGTGGGATATCTGCGATGACGTGCTAGCTCCTGAAGGCGATGAAACCCAGGTTCGCGCT
GGCTCAGTGGTATCCAACAACGGTGGCGTCGATCTGTACTTCACCTCGGTTGTTGGCCCCACCTCCACTATCCAGCTGGC
ACACATCAACAACATCCGTGGCACCACCGAACTGATCAATGAGGACGAGCTGGGGCTCGATCCAGATGTCTTCCGAATCG
GCGAAGTGGTTGGCAACACCGATGGTTATGTAAAGTTCCGCTCACCGTGCGTTATCCCAGGTTGGGAAGACCAAGGAAAC
CGCGATGAAGGCCACTCAGGATGGTTGATGCTCGCTGTCACAGGCCCAGTGGAGGCTCCGACGGTAGTGATCCTGGACTC
CGCAGACGGCCGGGAATGGACCATCACAGGCCCATTGTCTATCAACGGCCTTTCTGGCTTGGAATCAGATGAAGTCCTGG
TTGCTCCCCGCATGATTCGCCTGCGCGATGAAGTGGACCATGAAATCTACGATGTCCTCATTGTCACCATTGAACAACAG
GGAATCGATATTTCCGGCTACCTGGTGGGGCAGCTCAACGGCTCCGAGTTTGATGTAAAGACACCGTTTACTCGAATTGA
TTTCGGCCATGACTTCTCCCGTCCCCGCAACACCAACTACGCCGAAACCACCATCGACTACGACTTCGCCCACATCTTTG
GCCTCATGAACGGTGTCGGACGCTTGGACTCCCCCACTGAGCATCTCAGCTGGAAGGAGGAGGGCTGGGCGAACACTATT
TCCTTCCCACGCGTGGTTACCCTGCAGGACGGTACGGTCTTCCAGACCCCACCAGAAGGTTTGCTTGATGCGATCCACGA
ATCCGAAGCTGCCGCAGGTTGGACAGGATTGTGCGAAATCCCATCAAATAGCTCAGTTGAAGTGGCGTTGAAAGATCAGA
ACGGCGAAATCGCTGCAACAATCACTCACCGCCACAATCAGCTAGTCGTTGATCGGTCCATGAACCCCAACCACGCGGGT
GATCCACACGCGATTGCACCATTAACTGATGATGAAACAGATTCACTGTTCATTGTCGTGGATGGTTCCACCGTGGAGGT
TTTTGCTGACGGCGGCTATGTGTCCATGGCAAGCCGTGTGTACTTCAACAACGGCCCATTCAGCGAATTTGAGGTCACCA
CCACCGGTGACGCAAGCATTATTCGCCAGGAAAGTCACTTCCCTGTTGATTTCAGTTCGGTGTCCCTAGATATAGATGAT
CTCACTGCGCTCATGCAGTTCGATGAAAACGAACCGCATGAAGGCCCAGTGAGGTAA

Upstream 100 bases:

>100_bases
TAACCTGCCTTCACCTGGGATTATCCACCCATGTGTAATGAAATCGCTACCCTGAATCAAAGACACTGGCGTAATTGAGT
GAAGGCAGGACAATAAAGAG

Downstream 100 bases:

>100_bases
GAGTTAGATGCGTTCCAGCCTGGTGATCTTGGCCCGGGCTGTAACCTTCATTTGTTCTGGTAGAGCGGCGATGCGTTCCG
CCAAAGCCTCAGGCTTAATG

Product: hypothetical protein

Products: NA

Alternate protein names: Sucrase; Invertase [H]

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MANVSGYHRPELHITAESGVLFAPAGVLLDDDTWHFFHQYRPSPDHGPRWAHQFAERTPFVWDICDDVLAPEGDETQVRA
GSVVSNNGGVDLYFTSVVGPTSTIQLAHINNIRGTTELINEDELGLDPDVFRIGEVVGNTDGYVKFRSPCVIPGWEDQGN
RDEGHSGWLMLAVTGPVEAPTVVILDSADGREWTITGPLSINGLSGLESDEVLVAPRMIRLRDEVDHEIYDVLIVTIEQQ
GIDISGYLVGQLNGSEFDVKTPFTRIDFGHDFSRPRNTNYAETTIDYDFAHIFGLMNGVGRLDSPTEHLSWKEEGWANTI
SFPRVVTLQDGTVFQTPPEGLLDAIHESEAAAGWTGLCEIPSNSSVEVALKDQNGEIAATITHRHNQLVVDRSMNPNHAG
DPHAIAPLTDDETDSLFIVVDGSTVEVFADGGYVSMASRVYFNNGPFSEFEVTTTGDASIIRQESHFPVDFSSVSLDIDD
LTALMQFDENEPHEGPVR

Sequences:

>Translated_498_residues
MANVSGYHRPELHITAESGVLFAPAGVLLDDDTWHFFHQYRPSPDHGPRWAHQFAERTPFVWDICDDVLAPEGDETQVRA
GSVVSNNGGVDLYFTSVVGPTSTIQLAHINNIRGTTELINEDELGLDPDVFRIGEVVGNTDGYVKFRSPCVIPGWEDQGN
RDEGHSGWLMLAVTGPVEAPTVVILDSADGREWTITGPLSINGLSGLESDEVLVAPRMIRLRDEVDHEIYDVLIVTIEQQ
GIDISGYLVGQLNGSEFDVKTPFTRIDFGHDFSRPRNTNYAETTIDYDFAHIFGLMNGVGRLDSPTEHLSWKEEGWANTI
SFPRVVTLQDGTVFQTPPEGLLDAIHESEAAAGWTGLCEIPSNSSVEVALKDQNGEIAATITHRHNQLVVDRSMNPNHAG
DPHAIAPLTDDETDSLFIVVDGSTVEVFADGGYVSMASRVYFNNGPFSEFEVTTTGDASIIRQESHFPVDFSSVSLDIDD
LTALMQFDENEPHEGPVR
>Mature_497_residues
ANVSGYHRPELHITAESGVLFAPAGVLLDDDTWHFFHQYRPSPDHGPRWAHQFAERTPFVWDICDDVLAPEGDETQVRAG
SVVSNNGGVDLYFTSVVGPTSTIQLAHINNIRGTTELINEDELGLDPDVFRIGEVVGNTDGYVKFRSPCVIPGWEDQGNR
DEGHSGWLMLAVTGPVEAPTVVILDSADGREWTITGPLSINGLSGLESDEVLVAPRMIRLRDEVDHEIYDVLIVTIEQQG
IDISGYLVGQLNGSEFDVKTPFTRIDFGHDFSRPRNTNYAETTIDYDFAHIFGLMNGVGRLDSPTEHLSWKEEGWANTIS
FPRVVTLQDGTVFQTPPEGLLDAIHESEAAAGWTGLCEIPSNSSVEVALKDQNGEIAATITHRHNQLVVDRSMNPNHAGD
PHAIAPLTDDETDSLFIVVDGSTVEVFADGGYVSMASRVYFNNGPFSEFEVTTTGDASIIRQESHFPVDFSSVSLDIDDL
TALMQFDENEPHEGPVR

Specific function: Unknown

COG id: COG1621

COG function: function code G; Beta-fructosidases (levanase/invertase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR001362
- InterPro:   IPR018053
- InterPro:   IPR013189
- InterPro:   IPR013148
- InterPro:   IPR006232 [H]

Pfam domain/function: PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]

EC number: =3.2.1.26 [H]

Molecular weight: Translated: 54717; Mature: 54586

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVSGYHRPELHITAESGVLFAPAGVLLDDDTWHFFHQYRPSPDHGPRWAHQFAERTPF
CCCCCCCCCCEEEEEECCCEEEECCCEEEECCCEEEHEECCCCCCCCCHHHHHHHHCCCE
VWDICDDVLAPEGDETQVRAGSVVSNNGGVDLYFTSVVGPTSTIQLAHINNIRGTTELIN
EEEHHHHHHCCCCCCCEEEECEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHCC
EDELGLDPDVFRIGEVVGNTDGYVKFRSPCVIPGWEDQGNRDEGHSGWLMLAVTGPVEAP
CCCCCCCCCHHHHHHHHCCCCCEEEECCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCC
TVVILDSADGREWTITGPLSINGLSGLESDEVLVAPRMIRLRDEVDHEIYDVLIVTIEQQ
EEEEEECCCCCEEEEECCEEECCCCCCCCCCEEECCHHEEHHHHHCCCEEEEEEEEEECC
GIDISGYLVGQLNGSEFDVKTPFTRIDFGHDFSRPRNTNYAETTIDYDFAHIFGLMNGVG
CCEEEEEEEEEECCCEEEEECCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCC
RLDSPTEHLSWKEEGWANTISFPRVVTLQDGTVFQTPPEGLLDAIHESEAAAGWTGLCEI
CCCCCHHHCCCCCCCCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHCCCCCCCEEEEC
PSNSSVEVALKDQNGEIAATITHRHNQLVVDRSMNPNHAGDPHAIAPLTDDETDSLFIVV
CCCCCEEEEEECCCCCEEEEEEECCCEEEEECCCCCCCCCCCCEECCCCCCCCCEEEEEE
DGSTVEVFADGGYVSMASRVYFNNGPFSEFEVTTTGDASIIRQESHFPVDFSSVSLDIDD
ECCEEEEEECCCEEEEEEEEEECCCCCCEEEEEECCCHHEEEECCCCCEECCEEEEEHHH
LTALMQFDENEPHEGPVR
HHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ANVSGYHRPELHITAESGVLFAPAGVLLDDDTWHFFHQYRPSPDHGPRWAHQFAERTPF
CCCCCCCCCEEEEEECCCEEEECCCEEEECCCEEEHEECCCCCCCCCHHHHHHHHCCCE
VWDICDDVLAPEGDETQVRAGSVVSNNGGVDLYFTSVVGPTSTIQLAHINNIRGTTELIN
EEEHHHHHHCCCCCCCEEEECEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHCC
EDELGLDPDVFRIGEVVGNTDGYVKFRSPCVIPGWEDQGNRDEGHSGWLMLAVTGPVEAP
CCCCCCCCCHHHHHHHHCCCCCEEEECCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCC
TVVILDSADGREWTITGPLSINGLSGLESDEVLVAPRMIRLRDEVDHEIYDVLIVTIEQQ
EEEEEECCCCCEEEEECCEEECCCCCCCCCCEEECCHHEEHHHHHCCCEEEEEEEEEECC
GIDISGYLVGQLNGSEFDVKTPFTRIDFGHDFSRPRNTNYAETTIDYDFAHIFGLMNGVG
CCEEEEEEEEEECCCEEEEECCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCC
RLDSPTEHLSWKEEGWANTISFPRVVTLQDGTVFQTPPEGLLDAIHESEAAAGWTGLCEI
CCCCCHHHCCCCCCCCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHCCCCCCCEEEEC
PSNSSVEVALKDQNGEIAATITHRHNQLVVDRSMNPNHAGDPHAIAPLTDDETDSLFIVV
CCCCCEEEEEECCCCCEEEEEEECCCEEEEECCCCCCCCCCCCEECCCCCCCCCEEEEEE
DGSTVEVFADGGYVSMASRVYFNNGPFSEFEVTTTGDASIIRQESHFPVDFSSVSLDIDD
ECCEEEEEECCCEEEEEEEEEECCCCCCEEEEEECCCHHEEEECCCCCEECCEEEEEHHH
LTALMQFDENEPHEGPVR
HHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA