| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145295238
Identifier: 145295238
GI number: 145295238
Start: 1284965
End: 1285504
Strand: Reverse
Name: 145295238
Synonym: cgR_1179
Alternate gene names: NA
Gene position: 1285504-1284965 (Counterclockwise)
Preceding gene: 145295239
Following gene: 145295236
Centisome position: 38.79
GC content: 52.96
Gene sequence:
>540_bases ATGACTGATCTTCATCCCGTAAAGCAGGAAATTTTCAACACTGCTGAATCCATAAACACAGATCCCAAGGGGTTTCTCCG CGAGGTAGACACCTTCAAAGTAACCGACTTCGGCCTGTACATGGCTCGTGGTGCAAACCACCCCAAGTTCGGATACTTGG AAAGCTGGCTCCTCCCAGAACTTGGATTGCGTGCCAACATTTTCCACTTCCGCAAAGGCGTGGATGAACGTCAGGATTAC TACATCGATGTCGCTGAAATTCGCGTCGAAGACAACATCTGGACCACCCGCGACCTCTACGTGGATCTCATCTCTGTCTG CGGAGAACCAGTAACAGTCATGGACATCGACGAACTAGCTGCAGCAACCTCAGCAGGGCTTATCACTGCAGATGACGCTG AGCGCGCAATTGATGCCACCTTGAATGCTGTTGAAGGAATCACCCGCCACGGCGACGATCCTATGCAGTGGCTGCGCTCC AAGGGAATCGAACTCACCTGGGCTGACGCCAGCCAGGTAGAGCTCGTCCCTGCAGAGTAA
Upstream 100 bases:
>100_bases GCCTCTATGTCAGGCGGCCTCACCACATCCACCGAAAACGGTTCAGCGAACTGTAATTTCATCCCGACTGCCGTCGTATT CGATGTGAGGTAAGAAAACA
Downstream 100 bases:
>100_bases CTACTTCCTAACCGCTGCTTTAATTTGTTCCTCATCCAAGTTTGAATCTTGGATTTCCTGGTTGAGCACCGCCAGCTCTG CTCCACTCAACGCTCCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTDLHPVKQEIFNTAESINTDPKGFLREVDTFKVTDFGLYMARGANHPKFGYLESWLLPELGLRANIFHFRKGVDERQDY YIDVAEIRVEDNIWTTRDLYVDLISVCGEPVTVMDIDELAAATSAGLITADDAERAIDATLNAVEGITRHGDDPMQWLRS KGIELTWADASQVELVPAE
Sequences:
>Translated_179_residues MTDLHPVKQEIFNTAESINTDPKGFLREVDTFKVTDFGLYMARGANHPKFGYLESWLLPELGLRANIFHFRKGVDERQDY YIDVAEIRVEDNIWTTRDLYVDLISVCGEPVTVMDIDELAAATSAGLITADDAERAIDATLNAVEGITRHGDDPMQWLRS KGIELTWADASQVELVPAE >Mature_178_residues TDLHPVKQEIFNTAESINTDPKGFLREVDTFKVTDFGLYMARGANHPKFGYLESWLLPELGLRANIFHFRKGVDERQDYY IDVAEIRVEDNIWTTRDLYVDLISVCGEPVTVMDIDELAAATSAGLITADDAERAIDATLNAVEGITRHGDDPMQWLRSK GIELTWADASQVELVPAE
Specific function: Unknown
COG id: COG2306
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20132; Mature: 20001
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLHPVKQEIFNTAESINTDPKGFLREVDTFKVTDFGLYMARGANHPKFGYLESWLLPE CCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEHHHHHEECCCCCCCCCHHHHHHCCC LGLRANIFHFRKGVDERQDYYIDVAEIRVEDNIWTTRDLYVDLISVCGEPVTVMDIDELA CCCHHHHHHHHCCCCCCHHEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHHH AATSAGLITADDAERAIDATLNAVEGITRHGDDPMQWLRSKGIELTWADASQVELVPAE HHHHCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCEEEEECC >Mature Secondary Structure TDLHPVKQEIFNTAESINTDPKGFLREVDTFKVTDFGLYMARGANHPKFGYLESWLLPE CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEHHHHHEECCCCCCCCCHHHHHHCCC LGLRANIFHFRKGVDERQDYYIDVAEIRVEDNIWTTRDLYVDLISVCGEPVTVMDIDELA CCCHHHHHHHHCCCCCCHHEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHHH AATSAGLITADDAERAIDATLNAVEGITRHGDDPMQWLRSKGIELTWADASQVELVPAE HHHHCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA