| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is benK [H]
Identifier: 145295218
GI number: 145295218
Start: 1265998
End: 1267287
Strand: Reverse
Name: benK [H]
Synonym: cgR_1159
Alternate gene names: 145295218
Gene position: 1267287-1265998 (Counterclockwise)
Preceding gene: 145295219
Following gene: 145295216
Centisome position: 38.24
GC content: 56.98
Gene sequence:
>1290_bases ATGACCACCCCAACCCGCGCAACCAAAAGTGTCGGCACAGTTCTCGCACTCCTGTGGTTCGCAATTGTCCTCGACGGCTT TGACCTAGTCGTCCTGGGCGCAACAATCCCGTCCATGCTGGAGGATCCCGCGTGGGATCTCACTGCTGGACAGGCCACAC AGATTTCCACCATCGGCCTCGTCGGCATGACCATTGGCGCACTGACCATCGGTTTCTTAACTGACCGCCTGGGTCGACGC CGCGTCATGCTGTTCTCTGTGGCAGTATTTTCTGTATTCACTCTCCTGCTGGCATTCACCACCAACGTCCAGCTCTTCAG CCTGTGGCGTTTCCTCGCAGGTGTTGGCCTTGGTGGAGCACTCCCCACCGCAATTGCCATGGTGACCGAGTTCCGCCCCG GCACCAAAGCAGGCTCCGCATCCACCACCTTGATGACCGGTTACCACGTCGGCGCAGTAGCAACCGCTTTCCTTGGCCTC TTCCTTATCGATGGCTTTGGCTGGCACTCCATGTTCATCGCGGGTGCGGTACCAGGTCTGCTCCTGCTACCACTGTTGTA CTTCTTCCTTCCAGAATCCCCGCAGTACCTCAAAATCTCCGGCAAATTGGATGAGGCGCAGGCAGTTGCAGCATCTTATG GACTTTCCCTGGATGATGATCTTGATCGCGAACACGAAGAAGAACTCGGCGAGTCCTCCTCACTCTCCTCTCTGTTCAAG CCATCATTCCGCCGCAACACCCTGGCGATTTGGGGCACCTCATTCATGGGACTCCTCCTGGTCTACGGCCTGAACACGTG GCTTCCACAGATCATGCGCCAAGCAGACTACGACATGGGTAACTCCCTGGGCTTCCTCATGGTTCTTAACATCGGCGCTG TAATCGGCCTTTATATTGCAGGGCGATTTGCGGACAAGAATTCTCCTCGCAAAACTGCGCTCGTATGGTTCGTGTTCTCC GCGATTTTCCTCGCACTGCTCGCTGTTCGGATGCCACTTATCGGTCTGTATGGCATCGTGCTGCTCACCGGCATCTTTGT GTTCAGCTCCCAGGTACTCATCTACGCCTTCGTTGGTGAGAATCACCCTGCCAAGATGCGTGCAACTGCCATGGGATTCT CCGCAGGAATTGGTCGCCTCGGCGCGATCTCGGGTCCGTTGCTGGGGGGTCTGCTGGTCAGCGCCAACCTTGCTTACCCA TGGGGCTTCTTCGCCTTCGCTGGCATTGGACTGCTGGGCGCGCTGATTTTCTCCGCATCGAAGACTCTGAGGCATCGCGA GAACGCTTAG
Upstream 100 bases:
>100_bases ATTGCGCTCCGTCCTAGAATCCCAATCCGGCCAACGCTACCTCGCAGAGCAGTACGTTGGGCGCGACCTACCACGCTTCG AGGTATAAACGCTCGTGTCA
Downstream 100 bases:
>100_bases GTCTTACTGCTGAATCGACAAAGATCGTTGCACTTTCTTCCCCAAGTTGGTGCAACGATCTTTTTGGGTTATTAGTCTGC GGAAATACTCCACATCACGC
Product: hypothetical protein
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MTTPTRATKSVGTVLALLWFAIVLDGFDLVVLGATIPSMLEDPAWDLTAGQATQISTIGLVGMTIGALTIGFLTDRLGRR RVMLFSVAVFSVFTLLLAFTTNVQLFSLWRFLAGVGLGGALPTAIAMVTEFRPGTKAGSASTTLMTGYHVGAVATAFLGL FLIDGFGWHSMFIAGAVPGLLLLPLLYFFLPESPQYLKISGKLDEAQAVAASYGLSLDDDLDREHEEELGESSSLSSLFK PSFRRNTLAIWGTSFMGLLLVYGLNTWLPQIMRQADYDMGNSLGFLMVLNIGAVIGLYIAGRFADKNSPRKTALVWFVFS AIFLALLAVRMPLIGLYGIVLLTGIFVFSSQVLIYAFVGENHPAKMRATAMGFSAGIGRLGAISGPLLGGLLVSANLAYP WGFFAFAGIGLLGALIFSASKTLRHRENA
Sequences:
>Translated_429_residues MTTPTRATKSVGTVLALLWFAIVLDGFDLVVLGATIPSMLEDPAWDLTAGQATQISTIGLVGMTIGALTIGFLTDRLGRR RVMLFSVAVFSVFTLLLAFTTNVQLFSLWRFLAGVGLGGALPTAIAMVTEFRPGTKAGSASTTLMTGYHVGAVATAFLGL FLIDGFGWHSMFIAGAVPGLLLLPLLYFFLPESPQYLKISGKLDEAQAVAASYGLSLDDDLDREHEEELGESSSLSSLFK PSFRRNTLAIWGTSFMGLLLVYGLNTWLPQIMRQADYDMGNSLGFLMVLNIGAVIGLYIAGRFADKNSPRKTALVWFVFS AIFLALLAVRMPLIGLYGIVLLTGIFVFSSQVLIYAFVGENHPAKMRATAMGFSAGIGRLGAISGPLLGGLLVSANLAYP WGFFAFAGIGLLGALIFSASKTLRHRENA >Mature_428_residues TTPTRATKSVGTVLALLWFAIVLDGFDLVVLGATIPSMLEDPAWDLTAGQATQISTIGLVGMTIGALTIGFLTDRLGRRR VMLFSVAVFSVFTLLLAFTTNVQLFSLWRFLAGVGLGGALPTAIAMVTEFRPGTKAGSASTTLMTGYHVGAVATAFLGLF LIDGFGWHSMFIAGAVPGLLLLPLLYFFLPESPQYLKISGKLDEAQAVAASYGLSLDDDLDREHEEELGESSSLSSLFKP SFRRNTLAIWGTSFMGLLLVYGLNTWLPQIMRQADYDMGNSLGFLMVLNIGAVIGLYIAGRFADKNSPRKTALVWFVFSA IFLALLAVRMPLIGLYGIVLLTGIFVFSSQVLIYAFVGENHPAKMRATAMGFSAGIGRLGAISGPLLGGLLVSANLAYPW GFFAFAGIGLLGALIFSASKTLRHRENA
Specific function: Probable uptake of benzoate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=435, Percent_Identity=24.8275862068966, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI216548223, Length=311, Percent_Identity=27.9742765273312, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI7662270, Length=199, Percent_Identity=31.6582914572864, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI166064021, Length=350, Percent_Identity=26.8571428571429, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI213021148, Length=412, Percent_Identity=22.5728155339806, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI24497490, Length=361, Percent_Identity=24.9307479224377, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI262399383, Length=162, Percent_Identity=33.9506172839506, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI24497476, Length=387, Percent_Identity=25.0645994832041, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI20070188, Length=387, Percent_Identity=25.0645994832041, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI73695465, Length=163, Percent_Identity=30.6748466257669, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI11415038, Length=263, Percent_Identity=29.277566539924, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI31542327, Length=410, Percent_Identity=25.1219512195122, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI4507005, Length=360, Percent_Identity=23.3333333333333, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI87081723, Length=347, Percent_Identity=31.1239193083574, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1786229, Length=379, Percent_Identity=26.3852242744063, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1788068, Length=398, Percent_Identity=25.8793969849246, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788074, Length=410, Percent_Identity=26.3414634146341, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87082404, Length=376, Percent_Identity=23.6702127659574, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI87082159, Length=383, Percent_Identity=26.6318537859008, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87082231, Length=419, Percent_Identity=23.1503579952267, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI32564663, Length=420, Percent_Identity=23.5714285714286, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI193202825, Length=378, Percent_Identity=25.6613756613757, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71986689, Length=378, Percent_Identity=25.6613756613757, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193209824, Length=158, Percent_Identity=30.379746835443, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI19922874, Length=431, Percent_Identity=21.1136890951276, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI24640198, Length=301, Percent_Identity=25.5813953488372, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24640196, Length=301, Percent_Identity=25.5813953488372, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24640200, Length=301, Percent_Identity=25.5813953488372, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24648211, Length=232, Percent_Identity=27.5862068965517, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24649618, Length=374, Percent_Identity=24.0641711229947, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI20130083, Length=208, Percent_Identity=29.3269230769231, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI19922616, Length=419, Percent_Identity=22.1957040572792, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI161077756, Length=417, Percent_Identity=23.5011990407674, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24649616, Length=375, Percent_Identity=23.7333333333333, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45898; Mature: 45766
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPTRATKSVGTVLALLWFAIVLDGFDLVVLGATIPSMLEDPAWDLTAGQATQISTIGL CCCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHH VGMTIGALTIGFLTDRLGRRRVMLFSVAVFSVFTLLLAFTTNVQLFSLWRFLAGVGLGGA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH LPTAIAMVTEFRPGTKAGSASTTLMTGYHVGAVATAFLGLFLIDGFGWHSMFIAGAVPGL HHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLLPLLYFFLPESPQYLKISGKLDEAQAVAASYGLSLDDDLDREHEEELGESSSLSSLFK HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHC PSFRRNTLAIWGTSFMGLLLVYGLNTWLPQIMRQADYDMGNSLGFLMVLNIGAVIGLYIA CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GRFADKNSPRKTALVWFVFSAIFLALLAVRMPLIGLYGIVLLTGIFVFSSQVLIYAFVGE HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC NHPAKMRATAMGFSAGIGRLGAISGPLLGGLLVSANLAYPWGFFAFAGIGLLGALIFSAS CCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH KTLRHRENA HHHHHCCCC >Mature Secondary Structure TTPTRATKSVGTVLALLWFAIVLDGFDLVVLGATIPSMLEDPAWDLTAGQATQISTIGL CCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHH VGMTIGALTIGFLTDRLGRRRVMLFSVAVFSVFTLLLAFTTNVQLFSLWRFLAGVGLGGA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH LPTAIAMVTEFRPGTKAGSASTTLMTGYHVGAVATAFLGLFLIDGFGWHSMFIAGAVPGL HHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLLPLLYFFLPESPQYLKISGKLDEAQAVAASYGLSLDDDLDREHEEELGESSSLSSLFK HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHC PSFRRNTLAIWGTSFMGLLLVYGLNTWLPQIMRQADYDMGNSLGFLMVLNIGAVIGLYIA CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GRFADKNSPRKTALVWFVFSAIFLALLAVRMPLIGLYGIVLLTGIFVFSSQVLIYAFVGE HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC NHPAKMRATAMGFSAGIGRLGAISGPLLGGLLVSANLAYPWGFFAFAGIGLLGALIFSAS CCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH KTLRHRENA HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9294456 [H]