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The map label for this gene is ybdF [H]

Identifier: 145295215

GI number: 145295215

Start: 1263915

End: 1264259

Strand: Reverse

Name: ybdF [H]

Synonym: cgR_1156

Alternate gene names: 145295215

Gene position: 1264259-1263915 (Counterclockwise)

Preceding gene: 145295216

Following gene: 145295214

Centisome position: 38.15

GC content: 50.72

Gene sequence:

>345_bases
ATGGATCTGCACAAGGTAGCTGCAGCGCACGCGGCGACTCTCTCACTAAGCACCAAAGAGTTTCCTTTCGGGCCCGAGCA
CGAAGTGCACAAAGTGCGGGGCAAGGTATTTTTGTTGCTCACGATACTAAATGATGAGCCGATTATCACGCTGAAATCAG
ACCCCGAAATCGGTGCTTCACTACGCAGTGGCTTCCCCACCATCCAGGCCGGCTACCACATGAACAAAGTGCACTGGCTG
AGCATCAGTGATGGTGAACGGATCACGAAAGACTTCATAGAAGGTCTCGTGGAAGAGTCCTATGAACTGGTAATTTCCAC
CTTACCGAAGTCTAAAAGGCCTTAA

Upstream 100 bases:

>100_bases
AAGAAGTGGAACTGAGCGATGAAGATTTCGCAGCAGGCCACGACCTAGTGAAAACCAAATACGCCACCGAGGAGTGGACT
AAGCGAGTTCAATAGTTTCT

Downstream 100 bases:

>100_bases
CTTGGTTGCTCGCGGGTGGCAAGATGGGTGATATGAAAATCACCCGCCACATCCATGCATGCGTTGAGATCTCACAGGGA
AACGATCGAATCATTATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MDLHKVAAAHAATLSLSTKEFPFGPEHEVHKVRGKVFLLLTILNDEPIITLKSDPEIGASLRSGFPTIQAGYHMNKVHWL
SISDGERITKDFIEGLVEESYELVISTLPKSKRP

Sequences:

>Translated_114_residues
MDLHKVAAAHAATLSLSTKEFPFGPEHEVHKVRGKVFLLLTILNDEPIITLKSDPEIGASLRSGFPTIQAGYHMNKVHWL
SISDGERITKDFIEGLVEESYELVISTLPKSKRP
>Mature_114_residues
MDLHKVAAAHAATLSLSTKEFPFGPEHEVHKVRGKVFLLLTILNDEPIITLKSDPEIGASLRSGFPTIQAGYHMNKVHWL
SISDGERITKDFIEGLVEESYELVISTLPKSKRP

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786793, Length=108, Percent_Identity=40.7407407407407, Blast_Score=91, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007351 [H]

Pfam domain/function: PF04237 DUF419 [H]

EC number: NA

Molecular weight: Translated: 12692; Mature: 12692

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLHKVAAAHAATLSLSTKEFPFGPEHEVHKVRGKVFLLLTILNDEPIITLKSDPEIGAS
CCHHHHHHHHHHEEECCCCCCCCCCCHHHHHHCCEEEEEEEEECCCCEEEECCCCCCCHH
LRSGFPTIQAGYHMNKVHWLSISDGERITKDFIEGLVEESYELVISTLPKSKRP
HHCCCCEEECCCEECEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDLHKVAAAHAATLSLSTKEFPFGPEHEVHKVRGKVFLLLTILNDEPIITLKSDPEIGAS
CCHHHHHHHHHHEEECCCCCCCCCCCHHHHHHCCEEEEEEEEECCCCEEEECCCCCCCHH
LRSGFPTIQAGYHMNKVHWLSISDGERITKDFIEGLVEESYELVISTLPKSKRP
HHCCCCEEECCCEECEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]