| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is phnA [H]
Identifier: 145295206
GI number: 145295206
Start: 1255800
End: 1256144
Strand: Direct
Name: phnA [H]
Synonym: cgR_1147
Alternate gene names: 145295206
Gene position: 1255800-1256144 (Clockwise)
Preceding gene: 145295204
Following gene: 145295208
Centisome position: 37.89
GC content: 49.86
Gene sequence:
>345_bases ATGTCTGATCAATTAGATCCCTGCCCTGAATGCAGCAGTGAATATACCTACGAAAACGGCGGCGTTCTGGTCTGCCCAAT GTGTGCCCACGAATGGGTCGAAGGTGAAGTAGCGGAAGAAACCGCGACTGTCATTAAAGACTCTGTGGGAAATATCCTCA ATGATGGCGATTCCGTATCGATTGTGAAGAGCCTCAAAGTCAAGGGTGGCGGTGCCATCAAGATTGGCACCAAAGTCAGC GGAATTCGTCTTCTTGAAGAGCCAGTTGACGGCCACGACATCGACGCTAAGGTCCCTGGATTTGGTCAAATGCGACTCAA GTCCAGTGTTGTAAAGAAGGCCTAA
Upstream 100 bases:
>100_bases GGGCTGGTGCGGGTTGCTTTAATGGAGGTCATGCTCGCAGGCTAACAGAACTGGTGGTTTTTGTGCTGTTACCAGGGACA TCGGCTAGAATCTGCTGAAT
Downstream 100 bases:
>100_bases ACCCTTTTAAGGAGCTTTAGGGCAACTTGCGCCAGCGGCGGCGACGGTTAAAGCTGAAAGGGCTAAAATCGCTGCAAGAG TCGTTGGTACAGCAGTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSDQLDPCPECSSEYTYENGGVLVCPMCAHEWVEGEVAEETATVIKDSVGNILNDGDSVSIVKSLKVKGGGAIKIGTKVS GIRLLEEPVDGHDIDAKVPGFGQMRLKSSVVKKA
Sequences:
>Translated_114_residues MSDQLDPCPECSSEYTYENGGVLVCPMCAHEWVEGEVAEETATVIKDSVGNILNDGDSVSIVKSLKVKGGGAIKIGTKVS GIRLLEEPVDGHDIDAKVPGFGQMRLKSSVVKKA >Mature_113_residues SDQLDPCPECSSEYTYENGGVLVCPMCAHEWVEGEVAEETATVIKDSVGNILNDGDSVSIVKSLKVKGGGAIKIGTKVSG IRLLEEPVDGHDIDAKVPGFGQMRLKSSVVKKA
Specific function: Unknown
COG id: COG2824
COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790547, Length=111, Percent_Identity=54.954954954955, Blast_Score=120, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004624 - InterPro: IPR013988 - InterPro: IPR013987 [H]
Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]
EC number: NA
Molecular weight: Translated: 12064; Mature: 11933
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQLDPCPECSSEYTYENGGVLVCPMCAHEWVEGEVAEETATVIKDSVGNILNDGDSVS CCCCCCCCCCCCCCCEECCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEE IVKSLKVKGGGAIKIGTKVSGIRLLEEPVDGHDIDAKVPGFGQMRLKSSVVKKA EEEEEEECCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SDQLDPCPECSSEYTYENGGVLVCPMCAHEWVEGEVAEETATVIKDSVGNILNDGDSVS CCCCCCCCCCCCCCEECCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEE IVKSLKVKGGGAIKIGTKVSGIRLLEEPVDGHDIDAKVPGFGQMRLKSSVVKKA EEEEEEECCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]