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The map label for this gene is ydiF [H]

Identifier: 145295203

GI number: 145295203

Start: 1253702

End: 1254349

Strand: Direct

Name: ydiF [H]

Synonym: cgR_1144

Alternate gene names: 145295203

Gene position: 1253702-1254349 (Clockwise)

Preceding gene: 145295202

Following gene: 145295204

Centisome position: 37.83

GC content: 57.72

Gene sequence:

>648_bases
ATGACCGAAACACTTGTGGTGAATGGCCTTGCAGGCGGCTATGGGCACCGCACATTATTTAACGATGTGAATCTCACCGT
AGCTGCCGGCGATGTCGTGGGCGTTGTCGGCGTCAATGGCGCTGGTAAATCCACATTTCTAAAAATTCTGGCGGGCGTGG
AAAAGCCACTGGCTGGAACTATCGCGCTTTCGCCAGCCGATGCTTTTGTGGGCTACTTGCCACAGGAACACACCCGCACG
CCTGGAGAGACGATCGCAGCTTACATTGCTCGTCGAACCGGCTGCCAAGCTGCAACAACTGCCATGGATGACACCGCCGA
AGCGTTTGGTGCGGATCCAGACAACGCTGCCTTGGCCGATGCATACGCCGAGGCGCTGGATCGGTGGATGGCCAGTGGCG
CAGCCGATTTGGATGAACGCATCCCCATCGTGCTCGCTGATTTGGGCTTTGAGCTTCCCACCTCGACGCTGATGGAAGGA
CTTTCAGGCGGGCAGGCAGCCCGGGTCGGGCTGGCGGCGTTACTGTTGTCACGTTTTGACATTGTGCTTCTCGACGAGCC
CACCAACGATTTGGATCTCGACGGTCTTGAGCAACTGGAGAAATTTGTTCAGGGGGCTTCGCGGGGGAGTCGTACTGGTC
AGCCATGA

Upstream 100 bases:

>100_bases
TTCGGTCCGCTCTGGCAAAAATGGCTGGCTGCCACCTCGGCGCAGCAGCTAAAGGGCTGGGCTTAAATTGCTTGTCGACG
CCTAGTGCCACAATGGAGAC

Downstream 100 bases:

>100_bases
TCGTGAGTTTCTTTCCAGGTGTGTGACCACTGTGCTGGAACTCGATCTGCACCAAAATTCCCACCATGTTTATGGCGGTG
GATATGATTCCTACCTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MTETLVVNGLAGGYGHRTLFNDVNLTVAAGDVVGVVGVNGAGKSTFLKILAGVEKPLAGTIALSPADAFVGYLPQEHTRT
PGETIAAYIARRTGCQAATTAMDDTAEAFGADPDNAALADAYAEALDRWMASGAADLDERIPIVLADLGFELPTSTLMEG
LSGGQAARVGLAALLLSRFDIVLLDEPTNDLDLDGLEQLEKFVQGASRGSRTGQP

Sequences:

>Translated_215_residues
MTETLVVNGLAGGYGHRTLFNDVNLTVAAGDVVGVVGVNGAGKSTFLKILAGVEKPLAGTIALSPADAFVGYLPQEHTRT
PGETIAAYIARRTGCQAATTAMDDTAEAFGADPDNAALADAYAEALDRWMASGAADLDERIPIVLADLGFELPTSTLMEG
LSGGQAARVGLAALLLSRFDIVLLDEPTNDLDLDGLEQLEKFVQGASRGSRTGQP
>Mature_214_residues
TETLVVNGLAGGYGHRTLFNDVNLTVAAGDVVGVVGVNGAGKSTFLKILAGVEKPLAGTIALSPADAFVGYLPQEHTRTP
GETIAAYIARRTGCQAATTAMDDTAEAFGADPDNAALADAYAEALDRWMASGAADLDERIPIVLADLGFELPTSTLMEGL
SGGQAARVGLAALLLSRFDIVLLDEPTNDLDLDGLEQLEKFVQGASRGSRTGQP

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI153792144, Length=204, Percent_Identity=27.4509803921569, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI148612853, Length=199, Percent_Identity=32.1608040201005, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI2367384, Length=191, Percent_Identity=34.5549738219895, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1789751, Length=209, Percent_Identity=32.0574162679426, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787182, Length=189, Percent_Identity=31.7460317460317, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1786345, Length=187, Percent_Identity=31.0160427807487, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87082064, Length=194, Percent_Identity=29.3814432989691, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789873, Length=180, Percent_Identity=29.4444444444444, Blast_Score=61, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=181, Percent_Identity=31.4917127071823, Blast_Score=75, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24666836, Length=191, Percent_Identity=28.7958115183246, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 22219; Mature: 22088

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETLVVNGLAGGYGHRTLFNDVNLTVAAGDVVGVVGVNGAGKSTFLKILAGVEKPLAGT
CCCEEEEECCCCCCCCCCEECCCEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCE
IALSPADAFVGYLPQEHTRTPGETIAAYIARRTGCQAATTAMDDTAEAFGADPDNAALAD
EEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHH
AYAEALDRWMASGAADLDERIPIVLADLGFELPTSTLMEGLSGGQAARVGLAALLLSRFD
HHHHHHHHHHHCCCCCHHHCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCC
IVLLDEPTNDLDLDGLEQLEKFVQGASRGSRTGQP
EEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TETLVVNGLAGGYGHRTLFNDVNLTVAAGDVVGVVGVNGAGKSTFLKILAGVEKPLAGT
CCEEEEECCCCCCCCCCEECCCEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCE
IALSPADAFVGYLPQEHTRTPGETIAAYIARRTGCQAATTAMDDTAEAFGADPDNAALAD
EEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHH
AYAEALDRWMASGAADLDERIPIVLADLGFELPTSTLMEGLSGGQAARVGLAALLLSRFD
HHHHHHHHHHHCCCCCHHHCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCC
IVLLDEPTNDLDLDGLEQLEKFVQGASRGSRTGQP
EEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]