| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145295198
Identifier: 145295198
GI number: 145295198
Start: 1248011
End: 1249969
Strand: Reverse
Name: 145295198
Synonym: cgR_1139
Alternate gene names: NA
Gene position: 1249969-1248011 (Counterclockwise)
Preceding gene: 145295199
Following gene: 145295196
Centisome position: 37.72
GC content: 57.58
Gene sequence:
>1959_bases ATGGCCACTTCACATTCACGACCCCGCCGCAGCCGTTACGGACGCTACACCGGAGGCCCAGATCCGCTGGCACCTCCAGT GGATCTCAGCGATGCCCTGCGCGATATTGCTGATGATGTCATGGCTGGTTATTCCCCTGAGCAGGCACTACGTGAGTACC TGCGCAGGGGTGCCCGAGGACAGGAAGGCCTTGATGATCTAGCCTGGCGTGCAGCCGAACGCCGCCGAGAATTACTTAGC CGAAACAACCTCGGTGGCACACTCGCTGAGGTTCGCAAGCTTCTCGATGAAGGCCTCAAGCTGGAACGCGCTCAACTGGC CCGCGATATCGATATGGATGACACCGATCGAGCATTCCGCGAAATGCAGATCAGCAACCTCCCTGAATCCACCGCCGCTG CCGTTTCCGAGCTAGATTCCTACGATTGGCAATCCCAAGAAGCACGCCAAAAGTTTGAACAAATCCGTGACCTGCTTGGC CGTGAAATGTTGGATCAGCAATTCTCCGGCATGAAACAAGCCATGGAAGGTGCCTCCGACGAGGACAAAGCAGCCATCGC CGAAATGCTACGCGATCTCAACGACCTGCTCTCCAAACACCGCGAGGGAACGGACACTCCCACCGATTTCGCCAATTTTA TGGCCAAACACGGCGAGCATTTCCCCGAGCAGCCCCGCGACATCAATGAGCTCATCGATGCCCTCGCAGCCCGTTCCGCC GCAGCCAGTCGCATGTTCAACTCCATGTCAGAGGAACAACGCCGCGAACTCATGGAACTATCTGCCCAAGCTTTCGGATC CCCAGAGCTGCAGGAATTGCTCGGCGACCTGGCTGGAAACCTCCAAGGTCTGCGCCCCGAACTCAACTGGGATGGCTCCG AACAATTCTCCGGCGACGAAGGCATGGGACTTGGTGATGGCACCGGCGCCATGCAGGACCTCGCCGAACTCGACAACCTT GCTGAACAACTGAGCAACTCCCACACCGACATCGACATTGATGCCATTCGCCGCCAACTCGGCGATGACGCCGCTGTCTC TGCCGAAACTTTGGCCAAACTGGAGCGCGCGCTCCGCGACAGCGGCCTTCTTCGCCGCAACCCCGATGGCTCATTGAAGC TCAGCCCCCAGGCCATGCGCCGTCTAGGGAAAGCGCTTCTCGACGCCGCCAGCGAACAATTATCGTCCCGCCCAGGCTCG CGAGACTCCCGGTTGGCAGGAGCAAACGGTGAAGCAACGGGAGCATCCCGACCTTATGTTTTCGGAGACACCCAACCATG GGATGTCACCCGCACCATCACCAATGCTCTGCAGCGAACAGCCGGAACAGATACGGAAGGTCCGCTGCGCATCAACTTAG ATGATGTGGAAGTCATTGAAACTGAAGCCCGCACCCTCAACGCCGTGGCACTGTTAGTAGACACCAGTTATTCCATGGCT GCCGAAGGCCGCTGGGTGCCCATGAAGCAAACAGCGCTTGCCCTCCACCACCTGGTATCCACCCGGTTTAGAGGAGATGA ACTAGCACTAATCACTTTTGGTCGACATGCCCAAAACATGGACATCGAGGAACTGACTGCACTGCCACCGGTTCACGAAC AAGGAACCAACCTCCACCACGCATTACTGCTGGCAGAACGATTCTTTGCTCGCCATCCCTCCATGAAAGCAAGCTTGCTC ATTGTCACAGATGGCGAACCCACAGCTCACCTCGAAGCCGATGGGCACGCCTGGTTCAACTGGCCCACTGACCCAGAAAC CATGTTCAAGACCGTCACCCAACTGGATAAAGTAACCAAACGAGGAACTCACACCACACTCTTCCGACTGGGACATGATC AAGGATTAGAGCACTTTCTCAACCAACTAGCCGACCGTGTTGGCGGCACCGTGGTGGCTCCCGATCTGGACGGACTCGGC GCAGCTGTCGTGGGCGAGTATTTACGACACCGGTACTGA
Upstream 100 bases:
>100_bases GCTTGCTTTGGAAGGTCTTTACCTTTCCCGAAAAATTGCCAAGGATTCTGGCGAAGGTGAAACCATTTACGGTTAACTGG TTTTAAGGAGCACCACAGCC
Downstream 100 bases:
>100_bases GTTTTCGCCTTAGCCAGGCCAGCGAGAACCATGAGTGATTTGTGGGTATTGCTGCCTGGCTTACCAGTCCACACAACAAC ACTCTGCTCAGAATCCTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 652; Mature: 651
Protein sequence:
>652_residues MATSHSRPRRSRYGRYTGGPDPLAPPVDLSDALRDIADDVMAGYSPEQALREYLRRGARGQEGLDDLAWRAAERRRELLS RNNLGGTLAEVRKLLDEGLKLERAQLARDIDMDDTDRAFREMQISNLPESTAAAVSELDSYDWQSQEARQKFEQIRDLLG REMLDQQFSGMKQAMEGASDEDKAAIAEMLRDLNDLLSKHREGTDTPTDFANFMAKHGEHFPEQPRDINELIDALAARSA AASRMFNSMSEEQRRELMELSAQAFGSPELQELLGDLAGNLQGLRPELNWDGSEQFSGDEGMGLGDGTGAMQDLAELDNL AEQLSNSHTDIDIDAIRRQLGDDAAVSAETLAKLERALRDSGLLRRNPDGSLKLSPQAMRRLGKALLDAASEQLSSRPGS RDSRLAGANGEATGASRPYVFGDTQPWDVTRTITNALQRTAGTDTEGPLRINLDDVEVIETEARTLNAVALLVDTSYSMA AEGRWVPMKQTALALHHLVSTRFRGDELALITFGRHAQNMDIEELTALPPVHEQGTNLHHALLLAERFFARHPSMKASLL IVTDGEPTAHLEADGHAWFNWPTDPETMFKTVTQLDKVTKRGTHTTLFRLGHDQGLEHFLNQLADRVGGTVVAPDLDGLG AAVVGEYLRHRY
Sequences:
>Translated_652_residues MATSHSRPRRSRYGRYTGGPDPLAPPVDLSDALRDIADDVMAGYSPEQALREYLRRGARGQEGLDDLAWRAAERRRELLS RNNLGGTLAEVRKLLDEGLKLERAQLARDIDMDDTDRAFREMQISNLPESTAAAVSELDSYDWQSQEARQKFEQIRDLLG REMLDQQFSGMKQAMEGASDEDKAAIAEMLRDLNDLLSKHREGTDTPTDFANFMAKHGEHFPEQPRDINELIDALAARSA AASRMFNSMSEEQRRELMELSAQAFGSPELQELLGDLAGNLQGLRPELNWDGSEQFSGDEGMGLGDGTGAMQDLAELDNL AEQLSNSHTDIDIDAIRRQLGDDAAVSAETLAKLERALRDSGLLRRNPDGSLKLSPQAMRRLGKALLDAASEQLSSRPGS RDSRLAGANGEATGASRPYVFGDTQPWDVTRTITNALQRTAGTDTEGPLRINLDDVEVIETEARTLNAVALLVDTSYSMA AEGRWVPMKQTALALHHLVSTRFRGDELALITFGRHAQNMDIEELTALPPVHEQGTNLHHALLLAERFFARHPSMKASLL IVTDGEPTAHLEADGHAWFNWPTDPETMFKTVTQLDKVTKRGTHTTLFRLGHDQGLEHFLNQLADRVGGTVVAPDLDGLG AAVVGEYLRHRY >Mature_651_residues ATSHSRPRRSRYGRYTGGPDPLAPPVDLSDALRDIADDVMAGYSPEQALREYLRRGARGQEGLDDLAWRAAERRRELLSR NNLGGTLAEVRKLLDEGLKLERAQLARDIDMDDTDRAFREMQISNLPESTAAAVSELDSYDWQSQEARQKFEQIRDLLGR EMLDQQFSGMKQAMEGASDEDKAAIAEMLRDLNDLLSKHREGTDTPTDFANFMAKHGEHFPEQPRDINELIDALAARSAA ASRMFNSMSEEQRRELMELSAQAFGSPELQELLGDLAGNLQGLRPELNWDGSEQFSGDEGMGLGDGTGAMQDLAELDNLA EQLSNSHTDIDIDAIRRQLGDDAAVSAETLAKLERALRDSGLLRRNPDGSLKLSPQAMRRLGKALLDAASEQLSSRPGSR DSRLAGANGEATGASRPYVFGDTQPWDVTRTITNALQRTAGTDTEGPLRINLDDVEVIETEARTLNAVALLVDTSYSMAA EGRWVPMKQTALALHHLVSTRFRGDELALITFGRHAQNMDIEELTALPPVHEQGTNLHHALLLAERFFARHPSMKASLLI VTDGEPTAHLEADGHAWFNWPTDPETMFKTVTQLDKVTKRGTHTTLFRLGHDQGLEHFLNQLADRVGGTVVAPDLDGLGA AVVGEYLRHRY
Specific function: Unknown
COG id: COG4867
COG function: function code R; Uncharacterized protein with a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72101; Mature: 71970
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSHSRPRRSRYGRYTGGPDPLAPPVDLSDALRDIADDVMAGYSPEQALREYLRRGARG CCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC QEGLDDLAWRAAERRRELLSRNNLGGTLAEVRKLLDEGLKLERAQLARDIDMDDTDRAFR CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHH EMQISNLPESTAAAVSELDSYDWQSQEARQKFEQIRDLLGREMLDQQFSGMKQAMEGASD HHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EDKAAIAEMLRDLNDLLSKHREGTDTPTDFANFMAKHGEHFPEQPRDINELIDALAARSA CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH AASRMFNSMSEEQRRELMELSAQAFGSPELQELLGDLAGNLQGLRPELNWDGSEQFSGDE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GMGLGDGTGAMQDLAELDNLAEQLSNSHTDIDIDAIRRQLGDDAAVSAETLAKLERALRD CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH SGLLRRNPDGSLKLSPQAMRRLGKALLDAASEQLSSRPGSRDSRLAGANGEATGASRPYV CCCCEECCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE FGDTQPWDVTRTITNALQRTAGTDTEGPLRINLDDVEVIETEARTLNAVALLVDTSYSMA ECCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHEEEECCHHHH AEGRWVPMKQTALALHHLVSTRFRGDELALITFGRHAQNMDIEELTALPPVHEQGTNLHH CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCHHH ALLLAERFFARHPSMKASLLIVTDGEPTAHLEADGHAWFNWPTDPETMFKTVTQLDKVTK HHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCEEECCCCCHHHHHHHHHHHHHHHH RGTHTTLFRLGHDQGLEHFLNQLADRVGGTVVAPDLDGLGAAVVGEYLRHRY CCCHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure ATSHSRPRRSRYGRYTGGPDPLAPPVDLSDALRDIADDVMAGYSPEQALREYLRRGARG CCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC QEGLDDLAWRAAERRRELLSRNNLGGTLAEVRKLLDEGLKLERAQLARDIDMDDTDRAFR CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHH EMQISNLPESTAAAVSELDSYDWQSQEARQKFEQIRDLLGREMLDQQFSGMKQAMEGASD HHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EDKAAIAEMLRDLNDLLSKHREGTDTPTDFANFMAKHGEHFPEQPRDINELIDALAARSA CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH AASRMFNSMSEEQRRELMELSAQAFGSPELQELLGDLAGNLQGLRPELNWDGSEQFSGDE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GMGLGDGTGAMQDLAELDNLAEQLSNSHTDIDIDAIRRQLGDDAAVSAETLAKLERALRD CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH SGLLRRNPDGSLKLSPQAMRRLGKALLDAASEQLSSRPGSRDSRLAGANGEATGASRPYV CCCCEECCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE FGDTQPWDVTRTITNALQRTAGTDTEGPLRINLDDVEVIETEARTLNAVALLVDTSYSMA ECCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHEEEECCHHHH AEGRWVPMKQTALALHHLVSTRFRGDELALITFGRHAQNMDIEELTALPPVHEQGTNLHH CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCHHH ALLLAERFFARHPSMKASLLIVTDGEPTAHLEADGHAWFNWPTDPETMFKTVTQLDKVTK HHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCEEECCCCCHHHHHHHHHHHHHHHH RGTHTTLFRLGHDQGLEHFLNQLADRVGGTVVAPDLDGLGAAVVGEYLRHRY CCCHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]