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The map label for this gene is perM [C]

Identifier: 145295169

GI number: 145295169

Start: 1221760

End: 1223232

Strand: Reverse

Name: perM [C]

Synonym: cgR_1111

Alternate gene names: 145295169

Gene position: 1223232-1221760 (Counterclockwise)

Preceding gene: 145295170

Following gene: 145295168

Centisome position: 36.91

GC content: 53.09

Gene sequence:

>1473_bases
ATGGATGAATTCTCTCAGGTCCCTGACGGCGACTCACACGGCATCAGAGACGACAAAAATGGCGAACCCGTTGAGTCTGC
CAGTGCAGAGCCGACTCCAAGCAAAACTTCTGCTCGGCATCGGGATGCGCTTGACCGCATAGACCGCTCGGTGGTCATAG
GTGATTACTTCAAGAGGGTGTCCATGTGGAGTTTGCGGTTGGTGTTCGTCGCTGCCGCTGTCTTTATTTTATGGTGGGTC
ATTGGTCGGTTCTGGCAGGGCGTTTTGCCGGTTACCTTGGCAATCATCATCTGTACTGTGCTGTCCTCACCAAACTCGTG
GTTACGGAAGCATGGAGTTCCCAGTGTGCTGTCGGCGTTTATCACCATCGGCACGTTTTTTGCCATCACGGGTGCTATTT
TGTGGGTGATCGCACCGAGTATCGCCCAACAATCTCAGGTGTTGTATTTCCAGGCATTTGAGGGCATTTTGAGCATTCAG
CTCTGGCTGCAGGGTCCACCGTTGAACTTGGATTCTGGTGATTTGAGCCGCTACTTCAACGAGGCCGCCGCGTGGCTGCA
AAACCAGGCAGGTGCCATTGCTGGAGAAATCTTCTCAGGCCTGGGCGCTGCAACCAGTGTGCTTGTAACGCTTGGAGTGG
TGTTGGTTCTCACATTCTTTTTCCTCAAAGATGGCCACCGGTTCCTCCCGTGGGCCAGGAAGATTGGTGGAGAGCAAGCT
GGCTGGCACGTCACTGAGCTGCTCACCCGTGCGTGGACCACCTTGTCAGGATTTGTCCGTGCGCAGGCGCTGGTCTCTGC
GGTTGATGCTGTGTTCATTGGCATCGGACTACTTATTGTGGGCGTTCCCATGGCGTTGGCGCTGTCGGTGATTACCTTTG
TTGCTGGTTTCATTCCCATCATTGGTGCGTTCACCGCAGGTGCGTTGGCAGTGCTCGTGGCATTAGTCTCGCTGGGCTTT
ACCGAAGCGGTCATCGTGCTGGTTATCGTCGTGGCAGTGCAGCAGCTGGAGGGCAATATTTTGTCACCACTGTTGCAGTC
AAAGGCTATGAATTTGCACCCTGTCATCGTGTTGCTGTCGGTAACTGTCGGTGGCACGCTCTTCGGCATTGTCGGTGCAT
TCTTAGCAGTACCAGTGGCTGCGATGATTGCTGTATTCTTCCGCTATTTCCAGGACATGACTTCACTACGTGCTGGCGAG
AAGGTGGCTTCTGATCTGAAGTTTGAAAGCGAATACGGCGAGTTCGCTGGTCGTGCCATGGAAGCCGATGGTGAAATCTT
CCGCAGGCGCTACTACCAAGACTTGCTTGGTGGCGACGCTGAGACCAACGAACTGAAAATTCCTGAGTTTTTAGGTGAGG
ATCGTGAATCGGTAGATCCTAATGAGGTTCGTCGTAAAGAATTGAAACGAAGGTTTACCTCGGCAAGGACGGCAACTTCG
CAAGCATTCGATAAAATACGCAAGAGAAACTGA

Upstream 100 bases:

>100_bases
CGGCCTAAAGATCTCTGTACAAAACACTCCCGCCACAGTCGCTGGGAGTGTTTCGTGCTTTAAAACCAATAACCATGCAA
AATAGAGAACTGTGGCAACA

Downstream 100 bases:

>100_bases
GGCTCCATAAAAGCTGCAGAGACTGCAAGTGTAATTAGTAAATAGCAGTTAGATCGGTAAAGTAATCACTCGTGTCACAT
GGATCAGCATCGTCGAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MDEFSQVPDGDSHGIRDDKNGEPVESASAEPTPSKTSARHRDALDRIDRSVVIGDYFKRVSMWSLRLVFVAAAVFILWWV
IGRFWQGVLPVTLAIIICTVLSSPNSWLRKHGVPSVLSAFITIGTFFAITGAILWVIAPSIAQQSQVLYFQAFEGILSIQ
LWLQGPPLNLDSGDLSRYFNEAAAWLQNQAGAIAGEIFSGLGAATSVLVTLGVVLVLTFFFLKDGHRFLPWARKIGGEQA
GWHVTELLTRAWTTLSGFVRAQALVSAVDAVFIGIGLLIVGVPMALALSVITFVAGFIPIIGAFTAGALAVLVALVSLGF
TEAVIVLVIVVAVQQLEGNILSPLLQSKAMNLHPVIVLLSVTVGGTLFGIVGAFLAVPVAAMIAVFFRYFQDMTSLRAGE
KVASDLKFESEYGEFAGRAMEADGEIFRRRYYQDLLGGDAETNELKIPEFLGEDRESVDPNEVRRKELKRRFTSARTATS
QAFDKIRKRN

Sequences:

>Translated_490_residues
MDEFSQVPDGDSHGIRDDKNGEPVESASAEPTPSKTSARHRDALDRIDRSVVIGDYFKRVSMWSLRLVFVAAAVFILWWV
IGRFWQGVLPVTLAIIICTVLSSPNSWLRKHGVPSVLSAFITIGTFFAITGAILWVIAPSIAQQSQVLYFQAFEGILSIQ
LWLQGPPLNLDSGDLSRYFNEAAAWLQNQAGAIAGEIFSGLGAATSVLVTLGVVLVLTFFFLKDGHRFLPWARKIGGEQA
GWHVTELLTRAWTTLSGFVRAQALVSAVDAVFIGIGLLIVGVPMALALSVITFVAGFIPIIGAFTAGALAVLVALVSLGF
TEAVIVLVIVVAVQQLEGNILSPLLQSKAMNLHPVIVLLSVTVGGTLFGIVGAFLAVPVAAMIAVFFRYFQDMTSLRAGE
KVASDLKFESEYGEFAGRAMEADGEIFRRRYYQDLLGGDAETNELKIPEFLGEDRESVDPNEVRRKELKRRFTSARTATS
QAFDKIRKRN
>Mature_490_residues
MDEFSQVPDGDSHGIRDDKNGEPVESASAEPTPSKTSARHRDALDRIDRSVVIGDYFKRVSMWSLRLVFVAAAVFILWWV
IGRFWQGVLPVTLAIIICTVLSSPNSWLRKHGVPSVLSAFITIGTFFAITGAILWVIAPSIAQQSQVLYFQAFEGILSIQ
LWLQGPPLNLDSGDLSRYFNEAAAWLQNQAGAIAGEIFSGLGAATSVLVTLGVVLVLTFFFLKDGHRFLPWARKIGGEQA
GWHVTELLTRAWTTLSGFVRAQALVSAVDAVFIGIGLLIVGVPMALALSVITFVAGFIPIIGAFTAGALAVLVALVSLGF
TEAVIVLVIVVAVQQLEGNILSPLLQSKAMNLHPVIVLLSVTVGGTLFGIVGAFLAVPVAAMIAVFFRYFQDMTSLRAGE
KVASDLKFESEYGEFAGRAMEADGEIFRRRYYQDLLGGDAETNELKIPEFLGEDRESVDPNEVRRKELKRRFTSARTATS
QAFDKIRKRN

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=321, Percent_Identity=27.1028037383178, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI87082271, Length=208, Percent_Identity=27.8846153846154, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 53382; Mature: 53382

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCC
>Mature Secondary Structure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HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]