| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is actVB [H]
Identifier: 145295157
GI number: 145295157
Start: 1212442
End: 1212933
Strand: Direct
Name: actVB [H]
Synonym: cgR_1100
Alternate gene names: 145295157
Gene position: 1212442-1212933 (Clockwise)
Preceding gene: 145295155
Following gene: 145295158
Centisome position: 36.58
GC content: 52.03
Gene sequence:
>492_bases ATGACTTCAGCAATCACCACCGCAACTGATCTTCGCTCCGTACTGCGAAACGTACCAACCCCAATTAGCTTCATTGCAAC CCACATCGATCAGCCTCTGGGCATGATCGTTGGTTCATTCGTCAGCATTAGTGCCGAACCACCATTGGTAGGCATCTTCT TGCAGAAGAGCTCTTCTTCATGGCCAGCTATCGAGCAGGCATTAGTTACCGGCCAAGAGCTAGGCATTTCTATCCTCGGC GGGGCACACGCAGACCATGTGCGTAAGCTTTCTGGCCCATCCGACCAGCGCTTTGAAAACCTTGAGTGGGCGTCCACTGA AAACGGTGCGATTCACCTTGAAGGTGCTGATGCACAACTAACCACGAAACTTCATGATCTCCAGGAAATCGGCGATCACT TCTTTGCAGTTCTAGAAGTTATTGACGCTTCCGCTGACCAAGACTTCAGCTCAGCGCTGGTGTACCACCGCTCACAGGTG TCCTCGCTGTAG
Upstream 100 bases:
>100_bases ATTGCTCTCATCGGTTCGATATAGACTGAATTGTCTAGGTTAATATCCAATATGGAAGAAAAACTAGACAGTTAAGTAGA CTGAATGGTCTACTGGGTGC
Downstream 100 bases:
>100_bases GACACTAAATTTTAAAAGGGCGCGTCGAATCTTCGACGTGCCCTCTTTTAAAATTCATGGAACGCTTTATGGTGGGCGCG GAGGCTTTCCTCTTGCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: actI ORF6 [H]
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTSAITTATDLRSVLRNVPTPISFIATHIDQPLGMIVGSFVSISAEPPLVGIFLQKSSSSWPAIEQALVTGQELGISILG GAHADHVRKLSGPSDQRFENLEWASTENGAIHLEGADAQLTTKLHDLQEIGDHFFAVLEVIDASADQDFSSALVYHRSQV SSL
Sequences:
>Translated_163_residues MTSAITTATDLRSVLRNVPTPISFIATHIDQPLGMIVGSFVSISAEPPLVGIFLQKSSSSWPAIEQALVTGQELGISILG GAHADHVRKLSGPSDQRFENLEWASTENGAIHLEGADAQLTTKLHDLQEIGDHFFAVLEVIDASADQDFSSALVYHRSQV SSL >Mature_162_residues TSAITTATDLRSVLRNVPTPISFIATHIDQPLGMIVGSFVSISAEPPLVGIFLQKSSSSWPAIEQALVTGQELGISILGG AHADHVRKLSGPSDQRFENLEWASTENGAIHLEGADAQLTTKLHDLQEIGDHFFAVLEVIDASADQDFSSALVYHRSQVS SL
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.pristinaespiralis snaC [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: NA
Molecular weight: Translated: 17463; Mature: 17332
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAITTATDLRSVLRNVPTPISFIATHIDQPLGMIVGSFVSISAEPPLVGIFLQKSSSS CCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEECCCCC WPAIEQALVTGQELGISILGGAHADHVRKLSGPSDQRFENLEWASTENGAIHLEGADAQL CHHHHHHHHHHHHCCEEEECCCCHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEECCCCHH TTKLHDLQEIGDHFFAVLEVIDASADQDFSSALVYHRSQVSSL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TSAITTATDLRSVLRNVPTPISFIATHIDQPLGMIVGSFVSISAEPPLVGIFLQKSSSS CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEECCCCC WPAIEQALVTGQELGISILGGAHADHVRKLSGPSDQRFENLEWASTENGAIHLEGADAQL CHHHHHHHHHHHHCCEEEECCCCHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEECCCCHH TTKLHDLQEIGDHFFAVLEVIDASADQDFSSALVYHRSQVSSL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1527048; 12000953 [H]