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The map label for this gene is ybgK [H]

Identifier: 145295150

GI number: 145295150

Start: 1204825

End: 1205706

Strand: Reverse

Name: ybgK [H]

Synonym: cgR_1093

Alternate gene names: 145295150

Gene position: 1205706-1204825 (Counterclockwise)

Preceding gene: 145295151

Following gene: 145295147

Centisome position: 36.38

GC content: 52.95

Gene sequence:

>882_bases
ATGAGCTTCAAAGTAATTTCCACTGGCCCCCAAGCCATCTTCCAAGACCGAGGTCGCTTCGGTTTTGCCAGCGCTGGTGT
TGGAACCTCAGGATCCTTTGATCGTTTATCCGCTGCTCGCGCAAATCACGCTTTAGGTAATGATCCCAATGCAACCGTGG
TAGAGATTCTGCTCGGTGGCTTTGAGGTGGAGGCGTTGCACACCACCTCGATCGTGTTCACGGGAACTGAAGCTGAAGTG
ATGGTTCGAACGGCTGGTGGACAATCCAAAAATGCCACCACCAACACCATCATCGATGTTGCAGCTGGTGAACGTATCCG
CGTCGAGCCCGCCACCTATGGCATGCGGGCCTACTTTGCTGCTCGCGGTGGATTTGCAGTAGAAAAAACTCTGGGATCTG
CTTCAACCGATCTGATCTCCCACATGGGCCCTCGCCCGATCGAGCCCGGGGATGTCATTGACGTAGCAACAGACATTGCA
GATTCTCAGTGGTGGCCAAAACTTCGGCAACTGCCCACCTTATGGAAACGCATGCCAACAGAAACGCTTACCGTCATCCG
AGGTCCACGTGACAAATGGTTCACGCAAGAATCCCTCAACAACTTTTTTACTCAGGTGTTTACGGTGAGCAATGACTCCA
ACCGGATTGGTTTGCGCATGCACTCAAGCGAGCCGATCCAACGTCGTGTGGAAGGCGAGCTGAAAAGTGAAGGAATGGTC
CGGGGATCCATCCAGATTCCGCCTGGTGGAAACCCCGTGGTGTTTGGTCCCGATCATCCTGTGACCGGTGGCTATCCAGT
AATAGCAGTACTTACATCAAGGTCGTGTGATCGTTCGGCCCAGCTGTTGCCGGGCGATAAAGTCAGATTTAAATTGCTTT
AG

Upstream 100 bases:

>100_bases
AACTGCTGGGCACCACTGAGATTCCCATGTGGGATGTGGACCGGTGGCAACCATCGCTTCTCAAGCCCGGTGATTCAGTT
CGATTTGTACAGGTGAAGAA

Downstream 100 bases:

>100_bases
GAACTTTAAGCTTGCTCTGGAACGGATAAGAGGCGCTCCCACAGATCACAATCGCGCCATTGTCCTTCCATCTCGCCGTA
GGGCATCCTTGCCATTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSFKVISTGPQAIFQDRGRFGFASAGVGTSGSFDRLSAARANHALGNDPNATVVEILLGGFEVEALHTTSIVFTGTEAEV
MVRTAGGQSKNATTNTIIDVAAGERIRVEPATYGMRAYFAARGGFAVEKTLGSASTDLISHMGPRPIEPGDVIDVATDIA
DSQWWPKLRQLPTLWKRMPTETLTVIRGPRDKWFTQESLNNFFTQVFTVSNDSNRIGLRMHSSEPIQRRVEGELKSEGMV
RGSIQIPPGGNPVVFGPDHPVTGGYPVIAVLTSRSCDRSAQLLPGDKVRFKLL

Sequences:

>Translated_293_residues
MSFKVISTGPQAIFQDRGRFGFASAGVGTSGSFDRLSAARANHALGNDPNATVVEILLGGFEVEALHTTSIVFTGTEAEV
MVRTAGGQSKNATTNTIIDVAAGERIRVEPATYGMRAYFAARGGFAVEKTLGSASTDLISHMGPRPIEPGDVIDVATDIA
DSQWWPKLRQLPTLWKRMPTETLTVIRGPRDKWFTQESLNNFFTQVFTVSNDSNRIGLRMHSSEPIQRRVEGELKSEGMV
RGSIQIPPGGNPVVFGPDHPVTGGYPVIAVLTSRSCDRSAQLLPGDKVRFKLL
>Mature_292_residues
SFKVISTGPQAIFQDRGRFGFASAGVGTSGSFDRLSAARANHALGNDPNATVVEILLGGFEVEALHTTSIVFTGTEAEVM
VRTAGGQSKNATTNTIIDVAAGERIRVEPATYGMRAYFAARGGFAVEKTLGSASTDLISHMGPRPIEPGDVIDVATDIAD
SQWWPKLRQLPTLWKRMPTETLTVIRGPRDKWFTQESLNNFFTQVFTVSNDSNRIGLRMHSSEPIQRRVEGELKSEGMVR
GSIQIPPGGNPVVFGPDHPVTGGYPVIAVLTSRSCDRSAQLLPGDKVRFKLL

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=292, Percent_Identity=31.5068493150685, Blast_Score=129, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6319685, Length=303, Percent_Identity=29.042904290429, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 31688; Mature: 31557

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKVISTGPQAIFQDRGRFGFASAGVGTSGSFDRLSAARANHALGNDPNATVVEILLGG
CCEEEECCCHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCC
FEVEALHTTSIVFTGTEAEVMVRTAGGQSKNATTNTIIDVAAGERIRVEPATYGMRAYFA
EEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEEE
ARGGFAVEKTLGSASTDLISHMGPRPIEPGDVIDVATDIADSQWWPKLRQLPTLWKRMPT
ECCCCEEEHHCCCCHHHHHHHCCCCCCCCCCEEHHHHHHCCCCCCHHHHHHHHHHHHCCC
ETLTVIRGPRDKWFTQESLNNFFTQVFTVSNDSNRIGLRMHSSEPIQRRVEGELKSEGMV
CEEEEEECCCHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCCHHHHHHCCCCCCCCEE
RGSIQIPPGGNPVVFGPDHPVTGGYPVIAVLTSRSCDRSAQLLPGDKVRFKLL
EEEEECCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
SFKVISTGPQAIFQDRGRFGFASAGVGTSGSFDRLSAARANHALGNDPNATVVEILLGG
CEEEECCCHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCC
FEVEALHTTSIVFTGTEAEVMVRTAGGQSKNATTNTIIDVAAGERIRVEPATYGMRAYFA
EEEEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEEE
ARGGFAVEKTLGSASTDLISHMGPRPIEPGDVIDVATDIADSQWWPKLRQLPTLWKRMPT
ECCCCEEEHHCCCCHHHHHHHCCCCCCCCCCEEHHHHHHCCCCCCHHHHHHHHHHHHCCC
ETLTVIRGPRDKWFTQESLNNFFTQVFTVSNDSNRIGLRMHSSEPIQRRVEGELKSEGMV
CEEEEEECCCHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCCHHHHHHCCCCCCCCEE
RGSIQIPPGGNPVVFGPDHPVTGGYPVIAVLTSRSCDRSAQLLPGDKVRFKLL
EEEEECCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]