Click here to switch to the map view.

The map label for this gene is 145295028

Identifier: 145295028

GI number: 145295028

Start: 1080927

End: 1081436

Strand: Reverse

Name: 145295028

Synonym: cgR_0972

Alternate gene names: NA

Gene position: 1081436-1080927 (Counterclockwise)

Preceding gene: 145295029

Following gene: 145295027

Centisome position: 32.63

GC content: 53.33

Gene sequence:

>510_bases
ATGTCCATAAAACATGCACTCTTGGTGCTCATGCTCGACGAACCAACCTCGGCAAGTCAGCTGCAAACCAAGTTTGAAGA
AACAATGGGGATCTGGCAGCTCAATATCGGCCAAGTCACCCAAACCATCCAGCGGCTACAGCGCGACGGCCTGGCGGAAA
CCGCAGGCACCACCGTCAGTTCCAACGGCCGCACCGTAGACACTTTCCAGCCCACGGACTTAGGTCGCGAACTTGTCGCG
CAGTGGTTCGAAAGTCCCGTCACCGTCACACTGTCCGAACGCGATGAATTAGTCACCAAAATCGCCATCGCAGAATCACG
TGGCCTCAATTTGATTCCACTTTTAGACATTCAACGCAACACAGTCATGGCCGAACTACGCGCACTCAACAAATCCAGCC
GCGATCTCCCCGAAACTCGAAACACCCAACGGCTGCTCGTCGAAAAGCGAATCTTCGAGCTAGAAGCACAAGCACGTTGG
CTCGACCGAATTGAAGCATTGGACAAATAA

Upstream 100 bases:

>100_bases
CTCTTTAATTAACTTTTGGGCGACCCTTTACGGTCGCCCTCTTGCGTTCCTAAAACATACCCAGTAAGTTACTGGGTATC
CAATTCTTGATTGAGGAACA

Downstream 100 bases:

>100_bases
ATGACACACACGCCTCTCCCCCTCGAACTTCAAAACATCTCCCGAACCTTCGGCGAAGGCCCCCGTCTCGTCAGCGCGCT
CAACGACGTCTCCCTCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; PadR Family Transcriptional Regulator; Transcriptional Regulator PadR Family; PadR-Family Transcriptional Regulator; Transcriptional Regulator-Like Protein; PadR-Like Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; Secreted Protein

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSIKHALLVLMLDEPTSASQLQTKFEETMGIWQLNIGQVTQTIQRLQRDGLAETAGTTVSSNGRTVDTFQPTDLGRELVA
QWFESPVTVTLSERDELVTKIAIAESRGLNLIPLLDIQRNTVMAELRALNKSSRDLPETRNTQRLLVEKRIFELEAQARW
LDRIEALDK

Sequences:

>Translated_169_residues
MSIKHALLVLMLDEPTSASQLQTKFEETMGIWQLNIGQVTQTIQRLQRDGLAETAGTTVSSNGRTVDTFQPTDLGRELVA
QWFESPVTVTLSERDELVTKIAIAESRGLNLIPLLDIQRNTVMAELRALNKSSRDLPETRNTQRLLVEKRIFELEAQARW
LDRIEALDK
>Mature_168_residues
SIKHALLVLMLDEPTSASQLQTKFEETMGIWQLNIGQVTQTIQRLQRDGLAETAGTTVSSNGRTVDTFQPTDLGRELVAQ
WFESPVTVTLSERDELVTKIAIAESRGLNLIPLLDIQRNTVMAELRALNKSSRDLPETRNTQRLLVEKRIFELEAQARWL
DRIEALDK

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19144; Mature: 19013

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKHALLVLMLDEPTSASQLQTKFEETMGIWQLNIGQVTQTIQRLQRDGLAETAGTTVS
CCCCCEEEEEEECCCCCHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHCCCCHHCCCEEC
SNGRTVDTFQPTDLGRELVAQWFESPVTVTLSERDELVTKIAIAESRGLNLIPLLDIQRN
CCCCEEECCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCHH
TVMAELRALNKSSRDLPETRNTQRLLVEKRIFELEAQARWLDRIEALDK
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIKHALLVLMLDEPTSASQLQTKFEETMGIWQLNIGQVTQTIQRLQRDGLAETAGTTVS
CCCCEEEEEEECCCCCHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHCCCCHHCCCEEC
SNGRTVDTFQPTDLGRELVAQWFESPVTVTLSERDELVTKIAIAESRGLNLIPLLDIQRN
CCCCEEECCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCHH
TVMAELRALNKSSRDLPETRNTQRLLVEKRIFELEAQARWLDRIEALDK
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA