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The map label for this gene is yccF [H]

Identifier: 145295019

GI number: 145295019

Start: 1069940

End: 1070350

Strand: Direct

Name: yccF [H]

Synonym: cgR_0963

Alternate gene names: 145295019

Gene position: 1069940-1070350 (Clockwise)

Preceding gene: 145295018

Following gene: 145295024

Centisome position: 32.28

GC content: 52.31

Gene sequence:

>411_bases
ATGAGACTAATACTCAACCTGATTTGGTTATTCTTCGGTGGCATTTGGCTCGCGTTGGGATACGTATTCTTCGGAATCAT
CGCATGTATCTTCATCGTGACGATTCCCGCCGGTATCGCAAGCTTCCGCATGGCCAACTACGCGCTGTGGCCGTTTGGTA
GGACGGTTGTTCGTAATCCTAAAGCCGGAGGGTTTTCTGCCCTGAGCAACGGACTGTGGTTTATCATTGCTGGACTGTGG
CTGGCGATCGGGCACCTCACCACCGCGGCTGCCCAAGCGATCACCATCATCGGAATTCCACTGGCGATCGCAAACATCCG
CATGATCCCCGTGACGTGTTTCCCATTCGGCAAAGAAATCTATGACAGCAACCGAATTCCCTTCGGCTACGAACCGATGG
TCAAGTTTTAA

Upstream 100 bases:

>100_bases
AAAACCGTGCAGGAGATGCCGAACCCCAATCGTGAAAGCCGAGTTGGGGGAGCGAATAATCTGGTGGTGTCCGCGCTGCC
AACCGCTAAACTCGTGAAGC

Downstream 100 bases:

>100_bases
TTCGGCGACGGACTAAAACAAACAACACGTAAGCCACAATGAGCGCGATACCTACGTAAATGATCGTCGAATAGCGCTCA
AACCACATCGACACCGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRLILNLIWLFFGGIWLALGYVFFGIIACIFIVTIPAGIASFRMANYALWPFGRTVVRNPKAGGFSALSNGLWFIIAGLW
LAIGHLTTAAAQAITIIGIPLAIANIRMIPVTCFPFGKEIYDSNRIPFGYEPMVKF

Sequences:

>Translated_136_residues
MRLILNLIWLFFGGIWLALGYVFFGIIACIFIVTIPAGIASFRMANYALWPFGRTVVRNPKAGGFSALSNGLWFIIAGLW
LAIGHLTTAAAQAITIIGIPLAIANIRMIPVTCFPFGKEIYDSNRIPFGYEPMVKF
>Mature_136_residues
MRLILNLIWLFFGGIWLALGYVFFGIIACIFIVTIPAGIASFRMANYALWPFGRTVVRNPKAGGFSALSNGLWFIIAGLW
LAIGHLTTAAAQAITIIGIPLAIANIRMIPVTCFPFGKEIYDSNRIPFGYEPMVKF

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=132, Percent_Identity=30.3030303030303, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 15001; Mature: 15001

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLILNLIWLFFGGIWLALGYVFFGIIACIFIVTIPAGIASFRMANYALWPFGRTVVRNP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHCCC
KAGGFSALSNGLWFIIAGLWLAIGHLTTAAAQAITIIGIPLAIANIRMIPVTCFPFGKEI
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCHHH
YDSNRIPFGYEPMVKF
HCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLILNLIWLFFGGIWLALGYVFFGIIACIFIVTIPAGIASFRMANYALWPFGRTVVRNP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHCCC
KAGGFSALSNGLWFIIAGLWLAIGHLTTAAAQAITIIGIPLAIANIRMIPVTCFPFGKEI
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCHHH
YDSNRIPFGYEPMVKF
HCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]