| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is aroA
Identifier: 145294927
GI number: 145294927
Start: 961438
End: 962730
Strand: Reverse
Name: aroA
Synonym: cgR_0873
Alternate gene names: 145294927
Gene position: 962730-961438 (Counterclockwise)
Preceding gene: 145294929
Following gene: 145294926
Centisome position: 29.05
GC content: 53.05
Gene sequence:
>1293_bases ATGGTCTTTGTGTCTGATTCGTCTATCTCTTTGCCCATTTGGGATGCTCCGCGCGCTCGCGGCCCCATAGTCTCGGACCT GGCTATCCCTGGTTCCAAGTCGATCACCAACCGCGCCCTCATCTTGGCTGCGCTCGCATCAACTCCATCCACCATCATTG ATGTCCTTCGTAGTCGTGATACCGATCTCATGACTGATGGTCTACGCAGCCTCGGAATCACCATTACTGAAGAGGCAGTC GATCGCTACCGCGTTGAGCCCGGACAGTTGTCTGCTGGCTCCGTTGAGTGTGGTCTTGCTGGTACGGTCATGCGCTTTTT GCCTCCTGTTGCTGCTTTCGCTGATGGTCCTGTTCATTTTGATGGCGATCCTCAAGCTCGTGTTCGTCCGATGACCAGCA TTTTGGATGCGCTGCGTTCGCTTGGTGTGGAGGTGGACAACAACAATCTGCCTTTCACTGTTAATGCTGGTGAGGTCCCT GAGGGTGGCGTGGTTGAGATTGATGCTTCCGGCTCATCTCAGTTTGTTTCTGGTCTTTTGCTTTCAGCGCCTCGTTTTAA AAATGGCGTCACCGTTAAGCACGTCGGTGGTCGTCTGCCGAGCATGCCGCATATTGAGATGACCGTCGATATGCTTCGTT CCGCAGGCATTGAGATCGAAGAGTCAGAAAATCAGTGGGTTGTTCATCCTGGTGAGATCTTGGGTCGGACCTGGCGCATT GAGCCGGATCTTTCTAATGCGACTCCGTTCCTAGCTGCCGCTGCGGTCACTGGTGGAACCATCAAGATTAATCACTGGCC AATCAAAACTACTCAGCCTGGCGATGCTATTCGTTCGATTCTTGAGCGCATGGGCTGCGAAGTTGAGCTGGTTGCTCAGG GTGAAGGTTACGATCTGTCGGTGACTGGTCCGGTTGCTCTCAAGGGCATTGAGATCGATATGTCCGATATCGGTGAGTTG ACCCCTACCGTGGCGGCGTTGGCTGCGTTGGCGTCGACAGAGTCTCGTTTGACCGGTATTGCTCATCTTCGTGGCCATGA GACGGATCGTTTGGCTGCGTTGACTGCGGAGATCAACAAACTTGGTGGAAAGTGCACTGAGCTTAAGGATGGTCTGTTGA TTGAGCCTGCGTCGCTGCACGGTGGTGTGTGGCATTCATATGCTGATCATCGTATGGCTACTGCTGGTGCGATCATTGGC CTCGCGGTTGATGACGTTCAGGTTGAAGACATTAAGACCACTTCCAAGACTTTCCCTGGTTTTGAAAATGTTTGGGAGGA GATGGTTGGCTAG
Upstream 100 bases:
>100_bases TTGCGGAGCCACGACTGATCCGTCAAGTGCTATCTCGGTTGCGTCAATAAGCGAATCACCGGTGGTGAACAAAACAAATC TTCCACACATAACATCTATT
Downstream 100 bases:
>100_bases ACGCAGCTATGACGAATCCGATGTTCGTGTTCGCCCAGGTAAAGGTACCCGCCCTCGTACGAAGGATCGGCCATCGCATG AGAATGCTCTAGTGGGCATG
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MVFVSDSSISLPIWDAPRARGPIVSDLAIPGSKSITNRALILAALASTPSTIIDVLRSRDTDLMTDGLRSLGITITEEAV DRYRVEPGQLSAGSVECGLAGTVMRFLPPVAAFADGPVHFDGDPQARVRPMTSILDALRSLGVEVDNNNLPFTVNAGEVP EGGVVEIDASGSSQFVSGLLLSAPRFKNGVTVKHVGGRLPSMPHIEMTVDMLRSAGIEIEESENQWVVHPGEILGRTWRI EPDLSNATPFLAAAAVTGGTIKINHWPIKTTQPGDAIRSILERMGCEVELVAQGEGYDLSVTGPVALKGIEIDMSDIGEL TPTVAALAALASTESRLTGIAHLRGHETDRLAALTAEINKLGGKCTELKDGLLIEPASLHGGVWHSYADHRMATAGAIIG LAVDDVQVEDIKTTSKTFPGFENVWEEMVG
Sequences:
>Translated_430_residues MVFVSDSSISLPIWDAPRARGPIVSDLAIPGSKSITNRALILAALASTPSTIIDVLRSRDTDLMTDGLRSLGITITEEAV DRYRVEPGQLSAGSVECGLAGTVMRFLPPVAAFADGPVHFDGDPQARVRPMTSILDALRSLGVEVDNNNLPFTVNAGEVP EGGVVEIDASGSSQFVSGLLLSAPRFKNGVTVKHVGGRLPSMPHIEMTVDMLRSAGIEIEESENQWVVHPGEILGRTWRI EPDLSNATPFLAAAAVTGGTIKINHWPIKTTQPGDAIRSILERMGCEVELVAQGEGYDLSVTGPVALKGIEIDMSDIGEL TPTVAALAALASTESRLTGIAHLRGHETDRLAALTAEINKLGGKCTELKDGLLIEPASLHGGVWHSYADHRMATAGAIIG LAVDDVQVEDIKTTSKTFPGFENVWEEMVG >Mature_430_residues MVFVSDSSISLPIWDAPRARGPIVSDLAIPGSKSITNRALILAALASTPSTIIDVLRSRDTDLMTDGLRSLGITITEEAV DRYRVEPGQLSAGSVECGLAGTVMRFLPPVAAFADGPVHFDGDPQARVRPMTSILDALRSLGVEVDNNNLPFTVNAGEVP EGGVVEIDASGSSQFVSGLLLSAPRFKNGVTVKHVGGRLPSMPHIEMTVDMLRSAGIEIEESENQWVVHPGEILGRTWRI EPDLSNATPFLAAAAVTGGTIKINHWPIKTTQPGDAIRSILERMGCEVELVAQGEGYDLSVTGPVALKGIEIDMSDIGEL TPTVAALAALASTESRLTGIAHLRGHETDRLAALTAEINKLGGKCTELKDGLLIEPASLHGGVWHSYADHRMATAGAIIG LAVDDVQVEDIKTTSKTFPGFENVWEEMVG
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=410, Percent_Identity=35.1219512195122, Blast_Score=182, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6320332, Length=480, Percent_Identity=31.25, Blast_Score=165, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_CORGB (A4QC99)
Other databases:
- EMBL: AP009044 - RefSeq: YP_001137748.1 - ProteinModelPortal: A4QC99 - SMR: A4QC99 - STRING: A4QC99 - GeneID: 4992659 - GenomeReviews: AP009044_GR - KEGG: cgt:cgR_0873 - eggNOG: COG0128 - HOGENOM: HBG646626 - OMA: HRMATAG - ProtClustDB: PRK02427 - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 45586; Mature: 45586
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFVSDSSISLPIWDAPRARGPIVSDLAIPGSKSITNRALILAALASTPSTIIDVLRSRD CEEECCCCEEEEECCCCCCCCCCEEHEECCCCCCHHHHHEEEEEHHCCHHHHHHHHHCCC TDLMTDGLRSLGITITEEAVDRYRVEPGQLSAGSVECGLAGTVMRFLPPVAAFADGPVHF CHHHHHHHHHCCCEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCEEE DGDPQARVRPMTSILDALRSLGVEVDNNNLPFTVNAGEVPEGGVVEIDASGSSQFVSGLL CCCCCHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCCEEEEECCCCHHHHHHHH LSAPRFKNGVTVKHVGGRLPSMPHIEMTVDMLRSAGIEIEESENQWVVHPGEILGRTWRI HCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCEEEECHHHCCCEEEE EPDLSNATPFLAAAAVTGGTIKINHWPIKTTQPGDAIRSILERMGCEVELVAQGEGYDLS CCCCCCCCCHHEEHEECCCEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEE VTGPVALKGIEIDMSDIGELTPTVAALAALASTESRLTGIAHLRGHETDRLAALTAEINK EECCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LGGKCTELKDGLLIEPASLHGGVWHSYADHRMATAGAIIGLAVDDVQVEDIKTTSKTFPG HCCCHHHCCCCEEEECHHCCCCHHHHHHHHHHHHHCEEEEEEECCEEEEEECCCCCCCCC FENVWEEMVG HHHHHHHHCC >Mature Secondary Structure MVFVSDSSISLPIWDAPRARGPIVSDLAIPGSKSITNRALILAALASTPSTIIDVLRSRD CEEECCCCEEEEECCCCCCCCCCEEHEECCCCCCHHHHHEEEEEHHCCHHHHHHHHHCCC TDLMTDGLRSLGITITEEAVDRYRVEPGQLSAGSVECGLAGTVMRFLPPVAAFADGPVHF CHHHHHHHHHCCCEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCEEE DGDPQARVRPMTSILDALRSLGVEVDNNNLPFTVNAGEVPEGGVVEIDASGSSQFVSGLL CCCCCHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCCEEEEECCCCHHHHHHHH LSAPRFKNGVTVKHVGGRLPSMPHIEMTVDMLRSAGIEIEESENQWVVHPGEILGRTWRI HCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCEEEECHHHCCCEEEE EPDLSNATPFLAAAAVTGGTIKINHWPIKTTQPGDAIRSILERMGCEVELVAQGEGYDLS CCCCCCCCCHHEEHEECCCEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEE VTGPVALKGIEIDMSDIGELTPTVAALAALASTESRLTGIAHLRGHETDRLAALTAEINK EECCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LGGKCTELKDGLLIEPASLHGGVWHSYADHRMATAGAIIGLAVDDVQVEDIKTTSKTFPG HCCCHHHCCCCEEEECHHCCCCHHHHHHHHHHHHHCEEEEEEECCEEEEEECCCCCCCCC FENVWEEMVG HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA