| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yceF [C]
Identifier: 145294878
GI number: 145294878
Start: 914438
End: 915031
Strand: Reverse
Name: yceF [C]
Synonym: cgR_0825
Alternate gene names: 145294878
Gene position: 915031-914438 (Counterclockwise)
Preceding gene: 145294879
Following gene: 145294876
Centisome position: 27.61
GC content: 59.09
Gene sequence:
>594_bases ATGCAGATCGTTCTCGCTTCGCAGTCCCCGTCCCGCCGAAAAATCCTCAATTCGGCGGGCGTCGAGCCCCTCATCCACCC AGCTGATGTTGATGAGGACGCGCTCCTTCACTCCCTCAACGGCTCTGCGCCGGAGGAGATCGTCCGCCAGCTTGCGCTGG CTAAAGCACAGGTGGTTGCGCCGTCCTATCCGGGCGACGTCGTCATCGGTGGCGATTCCATGCTGCTTATCGACGCCACC CTCCAAGGCAAGCCCCACACCCGCGAAGCCACCATCGAAAGATGGAAACAACAACGCGGCAACAAGGCCACACTGATCAC CGGCCATGCCATCATCTTTGGCGATGAAGTGATCGTGGAGTCCTCCTCCACCAACATTCATTTCGCTGAGGCCAGCGATG TGGATATTGAGCGATACGCCGACTCCGGCGAACCCTTAGAGTGCGCAGGCGCGTTCACCCTCGAAGCACTTGGTGGTTGG TTCATCGATTCCATCGAAGGCGACCCCTCATCAGTGATCGGATTGTCTCTCCCCGTCGTGCGCCGTGCTTTGTACCGCCT CGGTTTCAACGCCAGCGACTTCTGGAACATGTAA
Upstream 100 bases:
>100_bases AGCAAGGACCGCAACAACTGGGGCAACCTGGATGAGCGTCTGTCTCGCCCGAACACGTTTAACCCCAGTGCGTTTCAGAA TGTGAATTTCTTCTAGTTAC
Downstream 100 bases:
>100_bases ACACTTTCCGCACCAGACAGGCGTGCCAAAGATCTTGAGTTTCCTCGTTCTTTGGCACGCCTGTCTGGTCTGTCTCGAGT CTCCCACCAAACCACAGTGC
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MQIVLASQSPSRRKILNSAGVEPLIHPADVDEDALLHSLNGSAPEEIVRQLALAKAQVVAPSYPGDVVIGGDSMLLIDAT LQGKPHTREATIERWKQQRGNKATLITGHAIIFGDEVIVESSSTNIHFAEASDVDIERYADSGEPLECAGAFTLEALGGW FIDSIEGDPSSVIGLSLPVVRRALYRLGFNASDFWNM
Sequences:
>Translated_197_residues MQIVLASQSPSRRKILNSAGVEPLIHPADVDEDALLHSLNGSAPEEIVRQLALAKAQVVAPSYPGDVVIGGDSMLLIDAT LQGKPHTREATIERWKQQRGNKATLITGHAIIFGDEVIVESSSTNIHFAEASDVDIERYADSGEPLECAGAFTLEALGGW FIDSIEGDPSSVIGLSLPVVRRALYRLGFNASDFWNM >Mature_197_residues MQIVLASQSPSRRKILNSAGVEPLIHPADVDEDALLHSLNGSAPEEIVRQLALAKAQVVAPSYPGDVVIGGDSMLLIDAT LQGKPHTREATIERWKQQRGNKATLITGHAIIFGDEVIVESSSTNIHFAEASDVDIERYADSGEPLECAGAFTLEALGGW FIDSIEGDPSSVIGLSLPVVRRALYRLGFNASDFWNM
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=202, Percent_Identity=28.7128712871287, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI310133124, Length=163, Percent_Identity=28.2208588957055, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI291045183, Length=196, Percent_Identity=28.0612244897959, Blast_Score=64, Evalue=6e-11, Organism=Escherichia coli, GI87081830, Length=192, Percent_Identity=31.7708333333333, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI1789646, Length=190, Percent_Identity=28.9473684210526, Blast_Score=68, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193202443, Length=191, Percent_Identity=31.9371727748691, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI78706856, Length=182, Percent_Identity=27.4725274725275, Blast_Score=71, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21220; Mature: 21220
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIVLASQSPSRRKILNSAGVEPLIHPADVDEDALLHSLNGSAPEEIVRQLALAKAQVVA CEEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHEEC PSYPGDVVIGGDSMLLIDATLQGKPHTREATIERWKQQRGNKATLITGHAIIFGDEVIVE CCCCCCEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCEEEEE SSSTNIHFAEASDVDIERYADSGEPLECAGAFTLEALGGWFIDSIEGDPSSVIGLSLPVV CCCCEEEEECCCCCCHHHHCCCCCCEEECCCEEHHHHCCEEEECCCCCCCCEEECHHHHH RRALYRLGFNASDFWNM HHHHHHHCCCCHHCCCC >Mature Secondary Structure MQIVLASQSPSRRKILNSAGVEPLIHPADVDEDALLHSLNGSAPEEIVRQLALAKAQVVA CEEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHEEC PSYPGDVVIGGDSMLLIDATLQGKPHTREATIERWKQQRGNKATLITGHAIIFGDEVIVE CCCCCCEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCEEEEE SSSTNIHFAEASDVDIERYADSGEPLECAGAFTLEALGGWFIDSIEGDPSSVIGLSLPVV CCCCEEEEECCCCCCHHHHCCCCCCEEECCCEEHHHHCCEEEECCCCCCCCEEECHHHHH RRALYRLGFNASDFWNM HHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]