| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is thtR [H]
Identifier: 145294874
GI number: 145294874
Start: 909128
End: 910018
Strand: Reverse
Name: thtR [H]
Synonym: cgR_0821
Alternate gene names: 145294874
Gene position: 910018-909128 (Counterclockwise)
Preceding gene: 145294876
Following gene: 145294873
Centisome position: 27.46
GC content: 58.36
Gene sequence:
>891_bases ATGGCAGCACCGTTCGACCCATTCCCAGCTTTTGAGGAATACGCACACCCTGAAAGGATCGTGTCTGCATCCTGGCTTTC CGCCCGCCTCGGCTCCCCTGGTCTGAAGGTTGTGGAGTCCAATGAAGATTCCCTTCTTTACGATATCGGACACCTCCCCG GCGCTGTGCGCATTGACTGGGCAAAGGACCTCAACGATCCCCTCACCCGCGATTTCATTGACGGTGAAGCTTTCGCTGAG CTGATGAACCGCAAGGGCATCGCTCGCGATGACACCGTTGTTGTCTACGGTGACAAGTCCAACTGGTGGGCTGCGTTCAC CCTGTGGGTCTTCGAACTGTTCGGCCACTCCGATGTCCGCCTGCTCAACGGCGGCCGTGACGCGTGGATGGCTGAAGAGC GCGACACCTCCTACGTGGTTCCGGAGTACCCCTCCGCCAACTACCCCGTCGTCGAGCGTGTCGACGAAAACCAGCGCGCG TTCGTGGCTGAGGTGCTCGGTTCGCTCACGCAATCCGGTGGCATGACGCTTGTCGACGTCAGGACCCCTTCGGAGTTCTC CGGATTGGATGAGCACGGCAACCCAACCTCAAACACCGGCGTGCTTCGTGGTGGACACATCCCAGGCGCGATCAACCTGG ATTGGTCGGACGCTGTTCTTCCCAACGGAAACTTCCGCACCCGTGCAGAGTTGGACAAGCTCTACGCTGATCTCAACCCA GCTGACGATACCGTTGTCTACTGCCAGGTTGGCGACCGCGCGGCCCACACCTGGTTCGTGCTGAAGTATCTGCTCGGTTT CAACAACGTCCGAAACTATGACGGATCGTGGGCAGAATGGGGCAATATGGTTCGCATGCCGATCGAAACTGGCGAAAACA CCAAAAAATAA
Upstream 100 bases:
>100_bases CTAGTAATTAAGGACACAAACACCTTTAACCAATATGCTGGGATACAGTATTTAATTTTCACCCATTTATGCACTCGTTT ATGGAAGGCAGCGACCCCAC
Downstream 100 bases:
>100_bases CGTTTTGGTGTCATAGAATAGGCGTATCCCCTTTTTGCCTAATCAAAAGCCATATTTCCTGCGTAAAACAGAGGAATTCC CCCAGAATATGAGTAAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MAAPFDPFPAFEEYAHPERIVSASWLSARLGSPGLKVVESNEDSLLYDIGHLPGAVRIDWAKDLNDPLTRDFIDGEAFAE LMNRKGIARDDTVVVYGDKSNWWAAFTLWVFELFGHSDVRLLNGGRDAWMAEERDTSYVVPEYPSANYPVVERVDENQRA FVAEVLGSLTQSGGMTLVDVRTPSEFSGLDEHGNPTSNTGVLRGGHIPGAINLDWSDAVLPNGNFRTRAELDKLYADLNP ADDTVVYCQVGDRAAHTWFVLKYLLGFNNVRNYDGSWAEWGNMVRMPIETGENTKK
Sequences:
>Translated_296_residues MAAPFDPFPAFEEYAHPERIVSASWLSARLGSPGLKVVESNEDSLLYDIGHLPGAVRIDWAKDLNDPLTRDFIDGEAFAE LMNRKGIARDDTVVVYGDKSNWWAAFTLWVFELFGHSDVRLLNGGRDAWMAEERDTSYVVPEYPSANYPVVERVDENQRA FVAEVLGSLTQSGGMTLVDVRTPSEFSGLDEHGNPTSNTGVLRGGHIPGAINLDWSDAVLPNGNFRTRAELDKLYADLNP ADDTVVYCQVGDRAAHTWFVLKYLLGFNNVRNYDGSWAEWGNMVRMPIETGENTKK >Mature_295_residues AAPFDPFPAFEEYAHPERIVSASWLSARLGSPGLKVVESNEDSLLYDIGHLPGAVRIDWAKDLNDPLTRDFIDGEAFAEL MNRKGIARDDTVVVYGDKSNWWAAFTLWVFELFGHSDVRLLNGGRDAWMAEERDTSYVVPEYPSANYPVVERVDENQRAF VAEVLGSLTQSGGMTLVDVRTPSEFSGLDEHGNPTSNTGVLRGGHIPGAINLDWSDAVLPNGNFRTRAELDKLYADLNPA DDTVVYCQVGDRAAHTWFVLKYLLGFNNVRNYDGSWAEWGNMVRMPIETGENTKK
Specific function: May Be A Sulfotransferase Involved In The Formation Of Thiosulfate. The Rhodanese Activity Of Ssea Is Weak, Its Participation In Detoxification Of Cyanide May Be Small. May Be Involved In The Enhancement Of Serine-Sensitivity. [C]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI17402865, Length=290, Percent_Identity=31.0344827586207, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI61835204, Length=274, Percent_Identity=28.1021897810219, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI194473681, Length=274, Percent_Identity=28.1021897810219, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI194473668, Length=274, Percent_Identity=28.1021897810219, Blast_Score=87, Evalue=2e-17, Organism=Escherichia coli, GI87082121, Length=282, Percent_Identity=28.0141843971631, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87081967, Length=300, Percent_Identity=28, Blast_Score=90, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17561888, Length=277, Percent_Identity=25.9927797833935, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI115534702, Length=226, Percent_Identity=29.2035398230088, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71997283, Length=235, Percent_Identity=26.8085106382979, Blast_Score=71, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6324825, Length=240, Percent_Identity=27.0833333333333, Blast_Score=72, Evalue=8e-14,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.1 [H]
Molecular weight: Translated: 33022; Mature: 32891
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00380 RHODANESE_1 ; PS00683 RHODANESE_2 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPFDPFPAFEEYAHPERIVSASWLSARLGSPGLKVVESNEDSLLYDIGHLPGAVRIDW CCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCEEEEEH AKDLNDPLTRDFIDGEAFAELMNRKGIARDDTVVVYGDKSNWWAAFTLWVFELFGHSDVR HHCCCCCHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEE LLNGGRDAWMAEERDTSYVVPEYPSANYPVVERVDENQRAFVAEVLGSLTQSGGMTLVDV EEECCCCCCEECCCCCCEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEE RTPSEFSGLDEHGNPTSNTGVLRGGHIPGAINLDWSDAVLPNGNFRTRAELDKLYADLNP CCCCHHCCCCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCC ADDTVVYCQVGDRAAHTWFVLKYLLGFNNVRNYDGSWAEWGNMVRMPIETGENTKK CCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEEECCCCCCC >Mature Secondary Structure AAPFDPFPAFEEYAHPERIVSASWLSARLGSPGLKVVESNEDSLLYDIGHLPGAVRIDW CCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCEEEEEH AKDLNDPLTRDFIDGEAFAELMNRKGIARDDTVVVYGDKSNWWAAFTLWVFELFGHSDVR HHCCCCCHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEE LLNGGRDAWMAEERDTSYVVPEYPSANYPVVERVDENQRAFVAEVLGSLTQSGGMTLVDV EEECCCCCCEECCCCCCEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEE RTPSEFSGLDEHGNPTSNTGVLRGGHIPGAINLDWSDAVLPNGNFRTRAELDKLYADLNP CCCCHHCCCCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCC ADDTVVYCQVGDRAAHTWFVLKYLLGFNNVRNYDGSWAEWGNMVRMPIETGENTKK CCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12948626; 8772169 [H]