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The map label for this gene is crtN [H]

Identifier: 145294795

GI number: 145294795

Start: 814481

End: 816127

Strand: Reverse

Name: crtN [H]

Synonym: cgR_0742

Alternate gene names: 145294795

Gene position: 816127-814481 (Counterclockwise)

Preceding gene: 145294796

Following gene: 145294794

Centisome position: 24.63

GC content: 49.0

Gene sequence:

>1647_bases
ATGAAGGTATCAACTAAGACTCCACGCTCCTCAGGTACCGCCGTAGTCATAGGAGCAGGTGTTGCCGGTTTAGCCACCTC
TGCACTTTTAGCTCGTGATGGCTGGCAAGTAACTGTTTTGGAAAAAAACACTGATGTTGGTGGCCGCGCCGGATCGCTGG
AAATATCAGACTTTCCTGGCTTTCGATGGGATACCGGACCTTCTTGGTACCTCATGCCCGAGGCCTTTGACCATTTCTTC
GCACTTTTTGGTGCACGTACTTCTGATTATCTCGATTTGGTAGAATTAACGCCTGGTTATCGAGTTTTTTCCGGCACACA
CGACGCTGTCGATGTCCCCACTGGGCGTGAAAAAGCAATTGCACTATTCGAATCCATCGAACCCGGCGCGGGTGCAAAGC
TAGGAAATTATCTTGATAGTGCGGAAGACGCCTACGACATTGCCATTGATAGATTCCTTTATAATAATTTCTCCACGTTA
GGCCCGCTGCTTCACAGGGATGTACTGACCCGAGCTGGCCGACTGTTTTCTCTACTGACCCGTTCTTTACAAAAGTACGT
AAATAGTCAGTTCAGTAGTCCGGTATTGCGCCAGATCCTGACCTATCCTGCAGTCTTCCTGTCTTCCCGGCCCACTACTA
CCCCATCGATGTACCACTTGATGAGTCATACCGATTTGGTGCAGGGAGTGAAATACCCTATAGGTGGTTTTACTGCAGTG
GTTAACGCTCTGCATCAGTTAGCACTGGAAAACGGGGTTGAGTTTCAACTCGATTCTGAGGTCATTTCCATCAACACTGC
TTCATCTAGGGGCAACACAAGCGCCACAGGTGTGAGCTTCCTTCACAACAGAAAAGTGCAAAATCTAGATGCGGATCTTG
TGGTTTCAGCAGGCGACCTGCACCACACAGAAAATAATCTGCTTCCCCGGGAACTTCGAACCTATCCCGAACGATATTGG
TCCAATCGCAATCCTGGAATTGGAGCGGTATTAATCCTCCTGGGCGTAAAAGGAGAGTTACCCCAGCTCGACCATCACAA
TCTTTTCTTCAGTGAAGATTGGACAGATGATTTTGCTGTAGTTTTCGACGGGCCTCAACTTACCCGCCCCCACAATGCAT
CTAATTCTATTTATGTTTCCAAGCCTTCAACGTCCGAAGACGGCGTTGCACCTGCTGGATACGAAAACCTTTTTGTTTTA
ATTCCAGCCAAGGCCTCTAGCAGCATCGGCCACGGTGATGCGTATATGCAGTCGGCTTCAGCATCCGTGGAAACAATCGC
GTCACATGCAATCAATCAAATTGCTACGCAAGCCGGCATCCCTGACCTCACTGACCGAATTGTGGTCAAACGCACTATTG
GCCCTGCGGATTTTGAACACCGCTACCATTCATGGGTAGGCAGTGCGCTGGGTCCAGCACATACTCTCAGACAGTCTGCT
TTCTTAAGAGGGCGCAATAGCTCCCGCAAGGTCGATAACCTCTTCTATTCCGGTGCCACTACCGTCCCAGGTGTAGGAAT
ACCCATGTGTTTAATTTCTGCCGAGAATATTATTAAGCGTTTACATGCCGATACCAGTGCAGGACCACTGCCCGAACCAT
TGCCGCCTAAAACGACACCATCTCAAAAGACCTCATACGATCATTAA

Upstream 100 bases:

>100_bases
TGCGGGAGCGAATCAGGGTTCCACTTCATATCAAACTCTCTATACTCGCTAGCGCCACGATGAAAGGTCTATCTATGAGC
ATCTACAGAAAGAATTCGTG

Downstream 100 bases:

>100_bases
ATTTTGATCCCTATCATCGATATTTCACAAAATGAGCAAGATAGCGATATTTTTATGGCCTTTATTTATCTAGGTACTCT
CCTAGTTCTCATTGGGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: 4,4'-diapophytoene desaturase; Diapophytoene desaturase [H]

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MKVSTKTPRSSGTAVVIGAGVAGLATSALLARDGWQVTVLEKNTDVGGRAGSLEISDFPGFRWDTGPSWYLMPEAFDHFF
ALFGARTSDYLDLVELTPGYRVFSGTHDAVDVPTGREKAIALFESIEPGAGAKLGNYLDSAEDAYDIAIDRFLYNNFSTL
GPLLHRDVLTRAGRLFSLLTRSLQKYVNSQFSSPVLRQILTYPAVFLSSRPTTTPSMYHLMSHTDLVQGVKYPIGGFTAV
VNALHQLALENGVEFQLDSEVISINTASSRGNTSATGVSFLHNRKVQNLDADLVVSAGDLHHTENNLLPRELRTYPERYW
SNRNPGIGAVLILLGVKGELPQLDHHNLFFSEDWTDDFAVVFDGPQLTRPHNASNSIYVSKPSTSEDGVAPAGYENLFVL
IPAKASSSIGHGDAYMQSASASVETIASHAINQIATQAGIPDLTDRIVVKRTIGPADFEHRYHSWVGSALGPAHTLRQSA
FLRGRNSSRKVDNLFYSGATTVPGVGIPMCLISAENIIKRLHADTSAGPLPEPLPPKTTPSQKTSYDH

Sequences:

>Translated_548_residues
MKVSTKTPRSSGTAVVIGAGVAGLATSALLARDGWQVTVLEKNTDVGGRAGSLEISDFPGFRWDTGPSWYLMPEAFDHFF
ALFGARTSDYLDLVELTPGYRVFSGTHDAVDVPTGREKAIALFESIEPGAGAKLGNYLDSAEDAYDIAIDRFLYNNFSTL
GPLLHRDVLTRAGRLFSLLTRSLQKYVNSQFSSPVLRQILTYPAVFLSSRPTTTPSMYHLMSHTDLVQGVKYPIGGFTAV
VNALHQLALENGVEFQLDSEVISINTASSRGNTSATGVSFLHNRKVQNLDADLVVSAGDLHHTENNLLPRELRTYPERYW
SNRNPGIGAVLILLGVKGELPQLDHHNLFFSEDWTDDFAVVFDGPQLTRPHNASNSIYVSKPSTSEDGVAPAGYENLFVL
IPAKASSSIGHGDAYMQSASASVETIASHAINQIATQAGIPDLTDRIVVKRTIGPADFEHRYHSWVGSALGPAHTLRQSA
FLRGRNSSRKVDNLFYSGATTVPGVGIPMCLISAENIIKRLHADTSAGPLPEPLPPKTTPSQKTSYDH
>Mature_548_residues
MKVSTKTPRSSGTAVVIGAGVAGLATSALLARDGWQVTVLEKNTDVGGRAGSLEISDFPGFRWDTGPSWYLMPEAFDHFF
ALFGARTSDYLDLVELTPGYRVFSGTHDAVDVPTGREKAIALFESIEPGAGAKLGNYLDSAEDAYDIAIDRFLYNNFSTL
GPLLHRDVLTRAGRLFSLLTRSLQKYVNSQFSSPVLRQILTYPAVFLSSRPTTTPSMYHLMSHTDLVQGVKYPIGGFTAV
VNALHQLALENGVEFQLDSEVISINTASSRGNTSATGVSFLHNRKVQNLDADLVVSAGDLHHTENNLLPRELRTYPERYW
SNRNPGIGAVLILLGVKGELPQLDHHNLFFSEDWTDDFAVVFDGPQLTRPHNASNSIYVSKPSTSEDGVAPAGYENLFVL
IPAKASSSIGHGDAYMQSASASVETIASHAINQIATQAGIPDLTDRIVVKRTIGPADFEHRYHSWVGSALGPAHTLRQSA
FLRGRNSSRKVDNLFYSGATTVPGVGIPMCLISAENIIKRLHADTSAGPLPEPLPPKTTPSQKTSYDH

Specific function: Catalyzes three successive dehydrogenation reactions that lead to the introduction of three double bonds into dehydrosqualene (4,4'-diapophytoene), with 4,4'-diapophytofluene and 4,4'-diapo-zeta-carotene as intermediates, and 4,4'- diaponeurosporene (the

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family. CrtN subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 59452; Mature: 59452

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSTKTPRSSGTAVVIGAGVAGLATSALLARDGWQVTVLEKNTDVGGRAGSLEISDFPG
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCC
FRWDTGPSWYLMPEAFDHFFALFGARTSDYLDLVELTPGYRVFSGTHDAVDVPTGREKAI
CCCCCCCCEEECHHHHHHHHHHHCCCCCCCHHHEECCCCCEEECCCCCCEECCCCCHHHH
ALFESIEPGAGAKLGNYLDSAEDAYDIAIDRFLYNNFSTLGPLLHRDVLTRAGRLFSLLT
HHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
RSLQKYVNSQFSSPVLRQILTYPAVFLSSRPTTTPSMYHLMSHTDLVQGVKYPIGGFTAV
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
VNALHQLALENGVEFQLDSEVISINTASSRGNTSATGVSFLHNRKVQNLDADLVVSAGDL
HHHHHHHHHHCCCCEEECCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCC
HHTENNLLPRELRTYPERYWSNRNPGIGAVLILLGVKGELPQLDHHNLFFSEDWTDDFAV
CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCEEE
VFDGPQLTRPHNASNSIYVSKPSTSEDGVAPAGYENLFVLIPAKASSSIGHGDAYMQSAS
EECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHH
ASVETIASHAINQIATQAGIPDLTDRIVVKRTIGPADFEHRYHSWVGSALGPAHTLRQSA
HHHHHHHHHHHHHHHHHCCCCCCHHCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHH
FLRGRNSSRKVDNLFYSGATTVPGVGIPMCLISAENIIKRLHADTSAGPLPEPLPPKTTP
HHCCCCCCCHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
SQKTSYDH
CCCCCCCC
>Mature Secondary Structure
MKVSTKTPRSSGTAVVIGAGVAGLATSALLARDGWQVTVLEKNTDVGGRAGSLEISDFPG
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCC
FRWDTGPSWYLMPEAFDHFFALFGARTSDYLDLVELTPGYRVFSGTHDAVDVPTGREKAI
CCCCCCCCEEECHHHHHHHHHHHCCCCCCCHHHEECCCCCEEECCCCCCEECCCCCHHHH
ALFESIEPGAGAKLGNYLDSAEDAYDIAIDRFLYNNFSTLGPLLHRDVLTRAGRLFSLLT
HHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
RSLQKYVNSQFSSPVLRQILTYPAVFLSSRPTTTPSMYHLMSHTDLVQGVKYPIGGFTAV
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
VNALHQLALENGVEFQLDSEVISINTASSRGNTSATGVSFLHNRKVQNLDADLVVSAGDL
HHHHHHHHHHCCCCEEECCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCC
HHTENNLLPRELRTYPERYWSNRNPGIGAVLILLGVKGELPQLDHHNLFFSEDWTDDFAV
CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCEEE
VFDGPQLTRPHNASNSIYVSKPSTSEDGVAPAGYENLFVLIPAKASSSIGHGDAYMQSAS
EECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHH
ASVETIASHAINQIATQAGIPDLTDRIVVKRTIGPADFEHRYHSWVGSALGPAHTLRQSA
HHHHHHHHHHHHHHHHHCCCCCCHHCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHH
FLRGRNSSRKVDNLFYSGATTVPGVGIPMCLISAENIIKRLHADTSAGPLPEPLPPKTTP
HHCCCCCCCHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
SQKTSYDH
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on NADH or NADPH; With a quinone or similar compound as acceptor [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA