| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yhjE [C]
Identifier: 145294695
GI number: 145294695
Start: 701193
End: 702545
Strand: Reverse
Name: yhjE [C]
Synonym: cgR_0643
Alternate gene names: 145294695
Gene position: 702545-701193 (Counterclockwise)
Preceding gene: 145294696
Following gene: 145294692
Centisome position: 21.2
GC content: 53.66
Gene sequence:
>1353_bases ATGACCAATGACATGCTTGCCACTGGACACCGAGAGATACACATCGAGACTAAAAAATCCTCCGATTCGCTAAGCAACGA ACATAAGCGAGTACTCGGTGGAGCCATGGTTGGCACCACCATCGAGTGGTTCGATTTCTTCATTTACGCGCAGGCTGCCG GCCTCATCTTTGCCACCCAGTACTTCAACCCCGCAACAAACCAGAGCCCATCACTGGCTCAAATCATCGCATGGGCCTCA TTGGGAATCAGCTTCCTATTCAGGCCAGTCGGCGCAATCATCGCAGGTCACCTCGGTGATAAACTCGGCCGGAAGCCTGT CTTGGTCCTGACCCTACTGGGCATGGGTGGAGCTACTTTTGCCATGGGACTGCTGCCTAACTACGCAGCTATCGGCATCG CGGCCCCTATATTGCTAGTTCTGCTTCGCATTTTGCAGGGCCTATCCGCTGGTGGTGAATGGGGCGGCGCTGCCTTGATC GCTGTTGAGCACGCACCAACAAATAAGCGTGGATACTTCGGTGCATTCCCTCAGGTTGGTGTTCCAGCAGGTATGGCACT GGCGACGATTTTCATGCTCATCGTTACCACTGCGCTGTCACCTGAGCAGTTCGAAACATGGGGCTGGCGCATCCCGTTCC TGTCTTCCCTGCTGCTGATTGGAATTGGTTTCTGGATCCGCTCCCTCGTTGAAGAATCCCCTGTCTTCGCCGAGATGAAC GACCTCAAGAAGACCGCATCCGCACCTCTAAGCACTTTGTTCAAGCAGCACTCCAAGCTGGTTATTCTCTGCGCATTGAT CTTCGCTGGATGTAATGCCGCTGGCTACCTCGCAATTGCGTTCTTTGCTTCCTACGGCACCAGCGTCCTTAAGATGGATC GACCAGTTGTCCTCGCGCTCACTTTGCTCACGGCTCTCGCCTGGATTGTCGCAACACTTGTCGCGGGTAAAGTCTCCGAT GTTATTGGTCGCAAACAAACCTTCGTCATTGGCTACGCCGCAATGATCATCTGGGCAATTCCTACCTGGCTGCTCATCGA CACCGGCAATGTTCTTCTCTTCGGTATCGGCGTAATTGTCCTGGGTCTTTTCCTCGGAATCACCTACGGACCACAGCCAT CACTTTACGCAGAGATGTTCCCTGCCAGCGTTCGCCTCTCTGGACTATCCATCGGATACGCTCTCGGTTCCATCATCGGT GGTGCTTTCGCACCAATGATCGCCGAACTCATCCTGGACACTACAGGAAACTCTATCAACATCGGCATCTACATCGCTAT CATTTCAGCGATCTCCCTCATCGCCGTGCTCATGGTGCCTAAGGGCATCCAAGGCAAGAGCCTTCACGATTAA
Upstream 100 bases:
>100_bases TAAAACTCCACACCGCGCAGTCAACAAAAATTTCCAGATTTTCCCCTGCGCGGTTTTTGTTTACCCAAAAACTCCCATTC CTCAGCAAAAGGAGCCTCAG
Downstream 100 bases:
>100_bases ACGCACGTACATAATCCCCCGGCCAACAGCTTACTTGCGCCAGGGGATTCCCTATTTTTATCTCTGAACTGCAAAATCTT GAGTCAATGTCTTCTTAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MTNDMLATGHREIHIETKKSSDSLSNEHKRVLGGAMVGTTIEWFDFFIYAQAAGLIFATQYFNPATNQSPSLAQIIAWAS LGISFLFRPVGAIIAGHLGDKLGRKPVLVLTLLGMGGATFAMGLLPNYAAIGIAAPILLVLLRILQGLSAGGEWGGAALI AVEHAPTNKRGYFGAFPQVGVPAGMALATIFMLIVTTALSPEQFETWGWRIPFLSSLLLIGIGFWIRSLVEESPVFAEMN DLKKTASAPLSTLFKQHSKLVILCALIFAGCNAAGYLAIAFFASYGTSVLKMDRPVVLALTLLTALAWIVATLVAGKVSD VIGRKQTFVIGYAAMIIWAIPTWLLIDTGNVLLFGIGVIVLGLFLGITYGPQPSLYAEMFPASVRLSGLSIGYALGSIIG GAFAPMIAELILDTTGNSINIGIYIAIISAISLIAVLMVPKGIQGKSLHD
Sequences:
>Translated_450_residues MTNDMLATGHREIHIETKKSSDSLSNEHKRVLGGAMVGTTIEWFDFFIYAQAAGLIFATQYFNPATNQSPSLAQIIAWAS LGISFLFRPVGAIIAGHLGDKLGRKPVLVLTLLGMGGATFAMGLLPNYAAIGIAAPILLVLLRILQGLSAGGEWGGAALI AVEHAPTNKRGYFGAFPQVGVPAGMALATIFMLIVTTALSPEQFETWGWRIPFLSSLLLIGIGFWIRSLVEESPVFAEMN DLKKTASAPLSTLFKQHSKLVILCALIFAGCNAAGYLAIAFFASYGTSVLKMDRPVVLALTLLTALAWIVATLVAGKVSD VIGRKQTFVIGYAAMIIWAIPTWLLIDTGNVLLFGIGVIVLGLFLGITYGPQPSLYAEMFPASVRLSGLSIGYALGSIIG GAFAPMIAELILDTTGNSINIGIYIAIISAISLIAVLMVPKGIQGKSLHD >Mature_449_residues TNDMLATGHREIHIETKKSSDSLSNEHKRVLGGAMVGTTIEWFDFFIYAQAAGLIFATQYFNPATNQSPSLAQIIAWASL GISFLFRPVGAIIAGHLGDKLGRKPVLVLTLLGMGGATFAMGLLPNYAAIGIAAPILLVLLRILQGLSAGGEWGGAALIA VEHAPTNKRGYFGAFPQVGVPAGMALATIFMLIVTTALSPEQFETWGWRIPFLSSLLLIGIGFWIRSLVEESPVFAEMND LKKTASAPLSTLFKQHSKLVILCALIFAGCNAAGYLAIAFFASYGTSVLKMDRPVVLALTLLTALAWIVATLVAGKVSDV IGRKQTFVIGYAAMIIWAIPTWLLIDTGNVLLFGIGVIVLGLFLGITYGPQPSLYAEMFPASVRLSGLSIGYALGSIIGG AFAPMIAELILDTTGNSINIGIYIAIISAISLIAVLMVPKGIQGKSLHD
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789941, Length=418, Percent_Identity=38.0382775119617, Blast_Score=243, Evalue=3e-65, Organism=Escherichia coli, GI1788292, Length=438, Percent_Identity=33.7899543378995, Blast_Score=239, Evalue=2e-64, Organism=Escherichia coli, GI1790550, Length=417, Percent_Identity=29.2565947242206, Blast_Score=202, Evalue=2e-53, Organism=Escherichia coli, GI1788942, Length=439, Percent_Identity=28.4738041002278, Blast_Score=142, Evalue=6e-35, Organism=Escherichia coli, GI87082404, Length=371, Percent_Identity=28.8409703504043, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI87082231, Length=470, Percent_Identity=22.1276595744681, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47670; Mature: 47539
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDMLATGHREIHIETKKSSDSLSNEHKRVLGGAMVGTTIEWFDFFIYAQAAGLIFATQ CCCCCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEH YFNPATNQSPSLAQIIAWASLGISFLFRPVGAIIAGHLGDKLGRKPVLVLTLLGMGGATF HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH AMGLLPNYAAIGIAAPILLVLLRILQGLSAGGEWGGAALIAVEHAPTNKRGYFGAFPQVG HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC VPAGMALATIFMLIVTTALSPEQFETWGWRIPFLSSLLLIGIGFWIRSLVEESPVFAEMN CCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH DLKKTASAPLSTLFKQHSKLVILCALIFAGCNAAGYLAIAFFASYGTSVLKMDRPVVLAL HHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHH TLLTALAWIVATLVAGKVSDVIGRKQTFVIGYAAMIIWAIPTWLLIDTGNVLLFGIGVIV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHH LGLFLGITYGPQPSLYAEMFPASVRLSGLSIGYALGSIIGGAFAPMIAELILDTTGNSIN HHHHHHCCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE IGIYIAIISAISLIAVLMVPKGIQGKSLHD HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TNDMLATGHREIHIETKKSSDSLSNEHKRVLGGAMVGTTIEWFDFFIYAQAAGLIFATQ CCCCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEH YFNPATNQSPSLAQIIAWASLGISFLFRPVGAIIAGHLGDKLGRKPVLVLTLLGMGGATF HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH AMGLLPNYAAIGIAAPILLVLLRILQGLSAGGEWGGAALIAVEHAPTNKRGYFGAFPQVG HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC VPAGMALATIFMLIVTTALSPEQFETWGWRIPFLSSLLLIGIGFWIRSLVEESPVFAEMN CCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH DLKKTASAPLSTLFKQHSKLVILCALIFAGCNAAGYLAIAFFASYGTSVLKMDRPVVLAL HHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHH TLLTALAWIVATLVAGKVSDVIGRKQTFVIGYAAMIIWAIPTWLLIDTGNVLLFGIGVIV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHH LGLFLGITYGPQPSLYAEMFPASVRLSGLSIGYALGSIIGGAFAPMIAELILDTTGNSIN HHHHHHCCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE IGIYIAIISAISLIAVLMVPKGIQGKSLHD HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]