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The map label for this gene is yeaM [C]

Identifier: 145294653

GI number: 145294653

Start: 672610

End: 673602

Strand: Reverse

Name: yeaM [C]

Synonym: cgR_0603

Alternate gene names: 145294653

Gene position: 673602-672610 (Counterclockwise)

Preceding gene: 145294656

Following gene: 145294652

Centisome position: 20.32

GC content: 56.29

Gene sequence:

>993_bases
ATGTCCATTCGGCCAGATAACCCGCAGATCAAGACATCAAACATTCGCACCATCGGATTTCTCATCTACGACGGCGTCTC
ACCCCTCGATTTCACTGGCCCCGCCGAAGCATTCAGTCGCTCCAACGGCTACGAACTGATCTACCTCTCCCCCAGCGGTG
GCAACATCCACACCGCATCCGGCATCACCATCGCAGACACACTCCCCGCCACATCCATCAACCCAGCAACACTGGACACA
TTGATCATCACAGGTTCCGATTCACTCCCCCAAACCCCTTTGAAAACTTCGCTTATCGACGCCGCCCGCCACCTCGTATG
CGGCCCTCGCCGCGTCGCCACCGTCTGCACCGGGGCTTTCATCCTCGCAGAGCTCGGATTATTAAACGGAAGGGAGGCCA
CCACCCACTGGAAGAATGCTCGGGATCTGGCCAGGCGATATCCCCAAATTCGCGTACGCCCCGACATCATCCATGTCCAC
GACGGTCGTTTTGTCACCTCAGCTGGCATCACCGCCGGCATCGACCTGGCTTTAAGTCTGATCGAGGAGGACCAAGGAGC
ACACATCGCCAGAGATACCGCCAGAGACATGGTGGTTTATATGCACCGCCCCGGCGGACAATCCCAATTCGCCACCACCA
CCGAAGCACCTTCAGTCAGCCACCCCAGCCTTCAAAAAGCCATTGACCACGTTTTTGAATATCCAGCAGCATCACATAGC
GCAGCAAGCCTTGCCGATTACGTTTCCGTGAGCCAACGCCATTTGACCAGAATTTTCCAATCCGAACTTGGCCTCAGCCC
AGCGCAATGGCTAGAACAGTTCCGCTTAAACACGGCGCAACAATTAATCCTCAACGGGGAATCGATAAGCACCACGGCAG
GACTCTCCGGATTTGGCAGCGAAGACAGCCTCCGACGTGCCTTCAGCAAATGGCTGCACATCACTCCCTCTGAGTATCGA
GCCAGATTCCGATCGACCTTTCCCGCACACTGA

Upstream 100 bases:

>100_bases
TTGAGTTCGCGGTTTTGCACTCTTTCCGACATTTTTTCTACCCTTTCCACACTTATGAATCACATCACTTTTAGTGTGGT
GTATGACATAAGCTAAAGCC

Downstream 100 bases:

>100_bases
GGGGTTCACGCGGCGATTTAATTAGCTCGACTTCGCGGTTTCGACTTCTTACGCTCAACTTCCCGTGGTCGACTTCCGTC
GGCGATCTCAGGTTTTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MSIRPDNPQIKTSNIRTIGFLIYDGVSPLDFTGPAEAFSRSNGYELIYLSPSGGNIHTASGITIADTLPATSINPATLDT
LIITGSDSLPQTPLKTSLIDAARHLVCGPRRVATVCTGAFILAELGLLNGREATTHWKNARDLARRYPQIRVRPDIIHVH
DGRFVTSAGITAGIDLALSLIEEDQGAHIARDTARDMVVYMHRPGGQSQFATTTEAPSVSHPSLQKAIDHVFEYPAASHS
AASLADYVSVSQRHLTRIFQSELGLSPAQWLEQFRLNTAQQLILNGESISTTAGLSGFGSEDSLRRAFSKWLHITPSEYR
ARFRSTFPAH

Sequences:

>Translated_330_residues
MSIRPDNPQIKTSNIRTIGFLIYDGVSPLDFTGPAEAFSRSNGYELIYLSPSGGNIHTASGITIADTLPATSINPATLDT
LIITGSDSLPQTPLKTSLIDAARHLVCGPRRVATVCTGAFILAELGLLNGREATTHWKNARDLARRYPQIRVRPDIIHVH
DGRFVTSAGITAGIDLALSLIEEDQGAHIARDTARDMVVYMHRPGGQSQFATTTEAPSVSHPSLQKAIDHVFEYPAASHS
AASLADYVSVSQRHLTRIFQSELGLSPAQWLEQFRLNTAQQLILNGESISTTAGLSGFGSEDSLRRAFSKWLHITPSEYR
ARFRSTFPAH
>Mature_329_residues
SIRPDNPQIKTSNIRTIGFLIYDGVSPLDFTGPAEAFSRSNGYELIYLSPSGGNIHTASGITIADTLPATSINPATLDTL
IITGSDSLPQTPLKTSLIDAARHLVCGPRRVATVCTGAFILAELGLLNGREATTHWKNARDLARRYPQIRVRPDIIHVHD
GRFVTSAGITAGIDLALSLIEEDQGAHIARDTARDMVVYMHRPGGQSQFATTTEAPSVSHPSLQKAIDHVFEYPAASHSA
ASLADYVSVSQRHLTRIFQSELGLSPAQWLEQFRLNTAQQLILNGESISTTAGLSGFGSEDSLRRAFSKWLHITPSEYRA
RFRSTFPAH

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 35913; Mature: 35782

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRPDNPQIKTSNIRTIGFLIYDGVSPLDFTGPAEAFSRSNGYELIYLSPSGGNIHTAS
CCCCCCCCCEEECCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCEEECC
GITIADTLPATSINPATLDTLIITGSDSLPQTPLKTSLIDAARHLVCGPRRVATVCTGAF
CEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
ILAELGLLNGREATTHWKNARDLARRYPQIRVRPDIIHVHDGRFVTSAGITAGIDLALSL
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCEEEEECCEEEECCCCHHHHHHHHHH
IEEDQGAHIARDTARDMVVYMHRPGGQSQFATTTEAPSVSHPSLQKAIDHVFEYPAASHS
HHCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH
AASLADYVSVSQRHLTRIFQSELGLSPAQWLEQFRLNTAQQLILNGESISTTAGLSGFGS
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCC
EDSLRRAFSKWLHITPSEYRARFRSTFPAH
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
SIRPDNPQIKTSNIRTIGFLIYDGVSPLDFTGPAEAFSRSNGYELIYLSPSGGNIHTAS
CCCCCCCCEEECCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCEEECC
GITIADTLPATSINPATLDTLIITGSDSLPQTPLKTSLIDAARHLVCGPRRVATVCTGAF
CEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
ILAELGLLNGREATTHWKNARDLARRYPQIRVRPDIIHVHDGRFVTSAGITAGIDLALSL
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCEEEEECCEEEECCCCHHHHHHHHHH
IEEDQGAHIARDTARDMVVYMHRPGGQSQFATTTEAPSVSHPSLQKAIDHVFEYPAASHS
HHCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH
AASLADYVSVSQRHLTRIFQSELGLSPAQWLEQFRLNTAQQLILNGESISTTAGLSGFGS
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCC
EDSLRRAFSKWLHITPSEYRARFRSTFPAH
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8157602 [H]