| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is fbpB [H]
Identifier: 145294546
GI number: 145294546
Start: 554466
End: 556112
Strand: Reverse
Name: fbpB [H]
Synonym: cgR_0497
Alternate gene names: 145294546
Gene position: 556112-554466 (Counterclockwise)
Preceding gene: 145294547
Following gene: 145294545
Centisome position: 16.78
GC content: 54.77
Gene sequence:
>1647_bases ATGCAGTTATCTCCTTCAAATACGTCGACGCAGCGCTTTCACATCTCTGCGTTGGCGTCTTTGTCTTTCATGCGTCTGGG TATGTGGCTGATTGTCGCGGGGTTGTTTATCACTCCGTTGGCGCTGGTGGTGGGCTTGGCGTTGGGAGGCAATCAGTTTC CTGCTCTGTGGGATTCCGGATTGGGCAAAGCCCTATGGAATTCCGCCTATACAACCGTGCTTTCTGCGGTGGGCGCGACC ATTATCGGCACGATCATGGCTCTCACGCTGGACCGAACTGATGTTTTCGGGCGCACCGCGTTGCGGTTATTTTTGTTATC CCCGCTGTTGATCCCTCCGTTTATTGGGGCTATTGCGTGGTTGCAGCTGTTCGGGAAGAACCAGGGCATCAACCGGTTTT TCGGCACGGAAGTGTGGGATATTTACGGCGCTGATGGTGTGACATTTTTGTTGATTGTGCACTCCTATCCCACTGTGTAC ATCATTGTTTCGGCAGCTCTGAGGCAACTTCCTAGTGATTTGGAGCAAGCTGCACGGATCGCGGGTGCGGATACTTTTAC GGTGTTGCGCACCATCACACTCCCACTGCTCAAACCTGCATTGTTATCCGCATTCACGCTCACCGCAGTGGCGAACCTCG CCGACTTTGGCATTCCCGCTCTGCTGGGATCGCCAGCGCGTTTTGAAACCTTAGCCACCATGATTTATCGCTTCATGGAA TCCGGCACCGTGAGCAATCCATTGCAGGTGGTATCCACCATTGGCGTCGTGTTGTTGTTCCTGGGAATCGCAGCAGTAAC CGCGGATTATCTGGTGTCTTTGTACGCGGCATCAAAGTTGCAAGACGCAGGAACACCGCATCGCTTTACTCTCAACAAAT CACGAATCCCAGTCAGCGTGATCACGTGGATCATCGCGTTGATCATCACCGCCGCCCCGCTGCTGGGCCTTGCATACAGG GCATTACTGCCTGCCCCAGGTGTGCCGTTCAACCTAGACAACATCACGCTCAACAACTTTGAAGCAGCACTGAGCAATCC ACGAGTAATCGAAGGATTCGGCAACTCCCTCATGTTATCCCTGGGTGCAGCCCTAATCTGTGGGGTGCTGGGATGGCTGA TCGGAGTGCTCATCACCCGAACCCAGCATTTCGCCAACGTACCGTTGACACTCACTGTGCTGCTTCCCACCGCACTGCCG GGCATGATCATCGGCGTCGGCTGGCTCATTTTGGGCAGATACACCGGAATTTACAACACACCTTGGGTGATTTTGGGTGC TTACGTGTGTGCTTTTACCGCGCTGGTTGTCCAAGCTGTACGCGGACCACTCAGTCAAGCACCCGAAGCAATCGAAGAAG CCGCACGAATCAGCGGCGCAGGCAGATTACGATCCATCATGGACACCACCGGAGCGATGGCAATTCCCGCAGCTTTCGCC GGCGCAGTGCTGGTTGCGGTAACTGCGGTTCGAGAGTTAACCGTGTCCATTTTGCTCATCGCGCCGGGCACCACCACCCT GGGTGTGCAGGTGTTCAATTTGCAGCAGGCGGGAAATTACAATCAGGCATCGGCGTTGTCGTTGATGTTTGCGATTATCG GTATCGTGGCGCTCGCGTTGACGGTGCGCAGCCAGAAGGAGTTTTAG
Upstream 100 bases:
>100_bases TTGGCTGACATCGAGCTCATGACCCCTGACCTGGAGGTTGTAACCGCTGATAAGGCGGCTGCTGTTGAGTTCTTCCAAAA CGCAATGAACTAGTTTTCCT
Downstream 100 bases:
>100_bases GTGTCATCGATCAAATTGCGCGATTTAAGCGTTAGCTTCCGCGACGGAACCTTCGGGCTGCAAGATATCAATTTGAAAAT TGAGCCGGAAGAATTTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MQLSPSNTSTQRFHISALASLSFMRLGMWLIVAGLFITPLALVVGLALGGNQFPALWDSGLGKALWNSAYTTVLSAVGAT IIGTIMALTLDRTDVFGRTALRLFLLSPLLIPPFIGAIAWLQLFGKNQGINRFFGTEVWDIYGADGVTFLLIVHSYPTVY IIVSAALRQLPSDLEQAARIAGADTFTVLRTITLPLLKPALLSAFTLTAVANLADFGIPALLGSPARFETLATMIYRFME SGTVSNPLQVVSTIGVVLLFLGIAAVTADYLVSLYAASKLQDAGTPHRFTLNKSRIPVSVITWIIALIITAAPLLGLAYR ALLPAPGVPFNLDNITLNNFEAALSNPRVIEGFGNSLMLSLGAALICGVLGWLIGVLITRTQHFANVPLTLTVLLPTALP GMIIGVGWLILGRYTGIYNTPWVILGAYVCAFTALVVQAVRGPLSQAPEAIEEAARISGAGRLRSIMDTTGAMAIPAAFA GAVLVAVTAVRELTVSILLIAPGTTTLGVQVFNLQQAGNYNQASALSLMFAIIGIVALALTVRSQKEF
Sequences:
>Translated_548_residues MQLSPSNTSTQRFHISALASLSFMRLGMWLIVAGLFITPLALVVGLALGGNQFPALWDSGLGKALWNSAYTTVLSAVGAT IIGTIMALTLDRTDVFGRTALRLFLLSPLLIPPFIGAIAWLQLFGKNQGINRFFGTEVWDIYGADGVTFLLIVHSYPTVY IIVSAALRQLPSDLEQAARIAGADTFTVLRTITLPLLKPALLSAFTLTAVANLADFGIPALLGSPARFETLATMIYRFME SGTVSNPLQVVSTIGVVLLFLGIAAVTADYLVSLYAASKLQDAGTPHRFTLNKSRIPVSVITWIIALIITAAPLLGLAYR ALLPAPGVPFNLDNITLNNFEAALSNPRVIEGFGNSLMLSLGAALICGVLGWLIGVLITRTQHFANVPLTLTVLLPTALP GMIIGVGWLILGRYTGIYNTPWVILGAYVCAFTALVVQAVRGPLSQAPEAIEEAARISGAGRLRSIMDTTGAMAIPAAFA GAVLVAVTAVRELTVSILLIAPGTTTLGVQVFNLQQAGNYNQASALSLMFAIIGIVALALTVRSQKEF >Mature_548_residues MQLSPSNTSTQRFHISALASLSFMRLGMWLIVAGLFITPLALVVGLALGGNQFPALWDSGLGKALWNSAYTTVLSAVGAT IIGTIMALTLDRTDVFGRTALRLFLLSPLLIPPFIGAIAWLQLFGKNQGINRFFGTEVWDIYGADGVTFLLIVHSYPTVY IIVSAALRQLPSDLEQAARIAGADTFTVLRTITLPLLKPALLSAFTLTAVANLADFGIPALLGSPARFETLATMIYRFME SGTVSNPLQVVSTIGVVLLFLGIAAVTADYLVSLYAASKLQDAGTPHRFTLNKSRIPVSVITWIIALIITAAPLLGLAYR ALLPAPGVPFNLDNITLNNFEAALSNPRVIEGFGNSLMLSLGAALICGVLGWLIGVLITRTQHFANVPLTLTVLLPTALP GMIIGVGWLILGRYTGIYNTPWVILGAYVCAFTALVVQAVRGPLSQAPEAIEEAARISGAGRLRSIMDTTGAMAIPAAFA GAVLVAVTAVRELTVSILLIAPGTTTLGVQVFNLQQAGNYNQASALSLMFAIIGIVALALTVRSQKEF
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1787570, Length=221, Percent_Identity=25.7918552036199, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 58033; Mature: 58033
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLSPSNTSTQRFHISALASLSFMRLGMWLIVAGLFITPLALVVGLALGGNQFPALWDSG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC LGKALWNSAYTTVLSAVGATIIGTIMALTLDRTDVFGRTALRLFLLSPLLIPPFIGAIAW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQLFGKNQGINRFFGTEVWDIYGADGVTFLLIVHSYPTVYIIVSAALRQLPSDLEQAARI HHHHCCCCCCCHHHCCHHHEEECCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHH AGADTFTVLRTITLPLLKPALLSAFTLTAVANLADFGIPALLGSPARFETLATMIYRFME CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHH SGTVSNPLQVVSTIGVVLLFLGIAAVTADYLVSLYAASKLQDAGTPHRFTLNKSRIPVSV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHH ITWIIALIITAAPLLGLAYRALLPAPGVPFNLDNITLNNFEAALSNPRVIEGFGNSLMLS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHCCCCEEECCCHHHHHH LGAALICGVLGWLIGVLITRTQHFANVPLTLTVLLPTALPGMIIGVGWLILGRYTGIYNT HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC PWVILGAYVCAFTALVVQAVRGPLSQAPEAIEEAARISGAGRLRSIMDTTGAMAIPAAFA HHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHH GAVLVAVTAVRELTVSILLIAPGTTTLGVQVFNLQQAGNYNQASALSLMFAIIGIVALAL HHHHHHHHHHHHHHEEEEEEECCCCEECEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHH TVRSQKEF HHHHCCCC >Mature Secondary Structure MQLSPSNTSTQRFHISALASLSFMRLGMWLIVAGLFITPLALVVGLALGGNQFPALWDSG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC LGKALWNSAYTTVLSAVGATIIGTIMALTLDRTDVFGRTALRLFLLSPLLIPPFIGAIAW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQLFGKNQGINRFFGTEVWDIYGADGVTFLLIVHSYPTVYIIVSAALRQLPSDLEQAARI HHHHCCCCCCCHHHCCHHHEEECCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHH AGADTFTVLRTITLPLLKPALLSAFTLTAVANLADFGIPALLGSPARFETLATMIYRFME CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHH SGTVSNPLQVVSTIGVVLLFLGIAAVTADYLVSLYAASKLQDAGTPHRFTLNKSRIPVSV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHH ITWIIALIITAAPLLGLAYRALLPAPGVPFNLDNITLNNFEAALSNPRVIEGFGNSLMLS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHCCCCEEECCCHHHHHH LGAALICGVLGWLIGVLITRTQHFANVPLTLTVLLPTALPGMIIGVGWLILGRYTGIYNT HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC PWVILGAYVCAFTALVVQAVRGPLSQAPEAIEEAARISGAGRLRSIMDTTGAMAIPAAFA HHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHH GAVLVAVTAVRELTVSILLIAPGTTTLGVQVFNLQQAGNYNQASALSLMFAIIGIVALAL HHHHHHHHHHHHHHEEEEEEECCCCEECEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHH TVRSQKEF HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8807793 [H]