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The map label for this gene is hofB [C]

Identifier: 145294432

GI number: 145294432

Start: 421155

End: 422288

Strand: Direct

Name: hofB [C]

Synonym: cgR_0387

Alternate gene names: 145294432

Gene position: 421155-422288 (Clockwise)

Preceding gene: 145294431

Following gene: 145294433

Centisome position: 12.71

GC content: 58.02

Gene sequence:

>1134_bases
ATGACTGACATTGATCTGGTGGTGGAAAACGTCCAAAGGATTATCGCCACCAAAGCGACACCGCCGACCTCTGCGGAAAT
AGCGAGCCTGATTCGGGAACAAGCAGGCGTGATCAGTAACGAGGACATCGTGATGGTGTTGCGTCGACTGCGCAGCGATT
CCGTGGGAGTGGGACCGTTGGAATCGCTGCTTGCGCTTCCTGGCGTGACGGATGTGTTGGTCAATGCACATGACAGCGTG
TGGATTGATCGCGGTCAGGGCGTGGAAAAAGTCGACATGGATCTGGGCTCAGAGGAGGCGGTGCGTCGCCTTGCCACCCG
GTTGGCGTTGACCTGTGGCAGACGCTTAGATGATGCACAGCCTTTCGCTGATGGCCGAATCACCAGGGACGACGGCAGCG
TGTTGCGCATTCACGCGGTGTTGGCACCCTTGGCGGAATCCGGCACGTGCATCAGTGTGCGAGTACTGCGTCAAGCACGG
TTGAGCCTTGATGATCTCATCAACAGCGGCACGGTGCCTGAGGACATCGCGCCTGCGCTCCGGAACATCATCAATCAACG
GCGCTCGTTCCTTGTTGTCGGTGGCACGGGCACAGGGAAAACCACCTTGCTCTCCGCGATGCTTACCGAGGTTCCCGCTG
ATCAGCGCATAATCTGCATCGAGGACACCGCAGAGCTTCATCCTGGACATCCCAGCATCATTAACTTGGTGTCTCGCCAA
GCAAACGTAGAGGGCGCAGGTGCCGTGAGCATGGCGGATTTGTTGAAACAATCGCTGCGCATGAGACCTGACCGGATTGT
TGTGGGTGAGATTCGCGGTGCGGAAGTTGTGGATCTTCTAGCTGCGATGAATACCGGACACGACGGTGGCGCTGGCACCA
TTCACGCGAACTCCATCTCTGAAGTTCCCGCGCGCATGGAAGCTCTTGCGGCGACCGGTGGATTGGACCGCATGGCATTA
CATTCTCAACTCGCGGCCGCCGTGGACATTGTGCTGGTCATGAAACACACCCCTTTTGGCCGCAGGCTAGCTCAACTCGG
GGTGCTCTGTGGAAACCCGGTGACCACGCAGGTGGTGTGGGATTTGGACCACGGCATGCACGAAGGGAGCGAAGAAGCAT
GGTTTATGCCCTAG

Upstream 100 bases:

>100_bases
TCCAGCGGCTGGCTAAGTCCGTGGAGATGCATGGGCTGACCGGTTCTTTGCCGAGGGTTTTAAGCTCAGCATGCGACGCG
GTCATCGGGGAGGTGGCGGC

Downstream 100 bases:

>100_bases
GCCTTCTTAGCGTGGCGGTGTTGATCTCTGGTTCAAGGGGCCCCGGCGCGCGTACCAGGCCACCAACACCTGGAAATGGC
GTCCATCTATTCGCCCTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MTDIDLVVENVQRIIATKATPPTSAEIASLIREQAGVISNEDIVMVLRRLRSDSVGVGPLESLLALPGVTDVLVNAHDSV
WIDRGQGVEKVDMDLGSEEAVRRLATRLALTCGRRLDDAQPFADGRITRDDGSVLRIHAVLAPLAESGTCISVRVLRQAR
LSLDDLINSGTVPEDIAPALRNIINQRRSFLVVGGTGTGKTTLLSAMLTEVPADQRIICIEDTAELHPGHPSIINLVSRQ
ANVEGAGAVSMADLLKQSLRMRPDRIVVGEIRGAEVVDLLAAMNTGHDGGAGTIHANSISEVPARMEALAATGGLDRMAL
HSQLAAAVDIVLVMKHTPFGRRLAQLGVLCGNPVTTQVVWDLDHGMHEGSEEAWFMP

Sequences:

>Translated_377_residues
MTDIDLVVENVQRIIATKATPPTSAEIASLIREQAGVISNEDIVMVLRRLRSDSVGVGPLESLLALPGVTDVLVNAHDSV
WIDRGQGVEKVDMDLGSEEAVRRLATRLALTCGRRLDDAQPFADGRITRDDGSVLRIHAVLAPLAESGTCISVRVLRQAR
LSLDDLINSGTVPEDIAPALRNIINQRRSFLVVGGTGTGKTTLLSAMLTEVPADQRIICIEDTAELHPGHPSIINLVSRQ
ANVEGAGAVSMADLLKQSLRMRPDRIVVGEIRGAEVVDLLAAMNTGHDGGAGTIHANSISEVPARMEALAATGGLDRMAL
HSQLAAAVDIVLVMKHTPFGRRLAQLGVLCGNPVTTQVVWDLDHGMHEGSEEAWFMP
>Mature_376_residues
TDIDLVVENVQRIIATKATPPTSAEIASLIREQAGVISNEDIVMVLRRLRSDSVGVGPLESLLALPGVTDVLVNAHDSVW
IDRGQGVEKVDMDLGSEEAVRRLATRLALTCGRRLDDAQPFADGRITRDDGSVLRIHAVLAPLAESGTCISVRVLRQARL
SLDDLINSGTVPEDIAPALRNIINQRRSFLVVGGTGTGKTTLLSAMLTEVPADQRIICIEDTAELHPGHPSIINLVSRQA
NVEGAGAVSMADLLKQSLRMRPDRIVVGEIRGAEVVDLLAAMNTGHDGGAGTIHANSISEVPARMEALAATGGLDRMALH
SQLAAAVDIVLVMKHTPFGRRLAQLGVLCGNPVTTQVVWDLDHGMHEGSEEAWFMP

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1786296, Length=198, Percent_Identity=31.8181818181818, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 40261; Mature: 40130

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIDLVVENVQRIIATKATPPTSAEIASLIREQAGVISNEDIVMVLRRLRSDSVGVGPL
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHH
ESLLALPGVTDVLVNAHDSVWIDRGQGVEKVDMDLGSEEAVRRLATRLALTCGRRLDDAQ
HHHHHCCCHHHHHHCCCCCEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PFADGRITRDDGSVLRIHAVLAPLAESGTCISVRVLRQARLSLDDLINSGTVPEDIAPAL
CCCCCEEECCCCCEEEHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
RNIINQRRSFLVVGGTGTGKTTLLSAMLTEVPADQRIICIEDTAELHPGHPSIINLVSRQ
HHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
ANVEGAGAVSMADLLKQSLRMRPDRIVVGEIRGAEVVDLLAAMNTGHDGGAGTIHANSIS
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCHH
EVPARMEALAATGGLDRMALHSQLAAAVDIVLVMKHTPFGRRLAQLGVLCGNPVTTQVVW
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCEEEEE
DLDHGMHEGSEEAWFMP
ECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDIDLVVENVQRIIATKATPPTSAEIASLIREQAGVISNEDIVMVLRRLRSDSVGVGPL
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHH
ESLLALPGVTDVLVNAHDSVWIDRGQGVEKVDMDLGSEEAVRRLATRLALTCGRRLDDAQ
HHHHHCCCHHHHHHCCCCCEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PFADGRITRDDGSVLRIHAVLAPLAESGTCISVRVLRQARLSLDDLINSGTVPEDIAPAL
CCCCCEEECCCCCEEEHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
RNIINQRRSFLVVGGTGTGKTTLLSAMLTEVPADQRIICIEDTAELHPGHPSIINLVSRQ
HHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
ANVEGAGAVSMADLLKQSLRMRPDRIVVGEIRGAEVVDLLAAMNTGHDGGAGTIHANSIS
CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEECCCHH
EVPARMEALAATGGLDRMALHSQLAAAVDIVLVMKHTPFGRRLAQLGVLCGNPVTTQVVW
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCEEEEE
DLDHGMHEGSEEAWFMP
ECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]