| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145294356
Identifier: 145294356
GI number: 145294356
Start: 338337
End: 339344
Strand: Reverse
Name: 145294356
Synonym: cgR_0311
Alternate gene names: NA
Gene position: 339344-338337 (Counterclockwise)
Preceding gene: 145294365
Following gene: 145294352
Centisome position: 10.24
GC content: 53.87
Gene sequence:
>1008_bases ATGGCTGAGCAGTTGCGTCAATTTGAAGGCAGGGTCCTCCCTAATCAATCCGAGGACTTGGAAGATCAGGGTCTGGGTTT TGACCTAGGTACCGTTTTCTCCCGCAGGAAAGTTTTGGGCTTCATTGGTGTTGGTGGAGCGGGTGTGGCTCTTGCTGCTT GCTCTCCTTCTGGTTCTTCAGCAGCATCCAGCACCTCAAGCGCCTCCAGTAGCGCAGCGGCAACCAGCAGTGCAGCGGCT GAGACTTTGACTGAGATGAAGTCGGAGACTGCTGGTCCGTACCCGGGCGATGGTTCGAACGGTCCAGATGTTCTGGAGGT CTCTGGTGTGGAGCGTCAGGACATCACCAAGTCCATTGACACTGACACTGTGGCAGAGGGCGTGCCACTGACGTTGACCA TGACCATTTTGGACATGAACAACAACAATCAGCCGATGGAGGGTGCTGCGGTTTACATTTGGCATTGTGATGCGCCGGGT CGTTACTCGATGTATGACGATGAGCTGCTGGAGGAGACTTACCTTCGTGGTGTGCAGATCACCGATAAGTATGGTCAGGT CACGTTCGATACCATCTTCCCCGGTTGCTATGCGGGTCGTTGGGTGCACATTCACTTTGAGGTTTTCCCTGATCGTGAGA GCATTTCGGATTCTACGAACAACATTTTGACGTCGCAGATTGCGCTCGATGAGGCTTCTGCAGCATCTGTCTATGCACTT GATGTGTACGGAGATTCGTTGACGAACCTGAATAACATCACGTTGGAGTCGGACAATGTCTTCTCCGATGGTTGGGATCA GCAGATGGCTAACCTGACTGGTGATGCTACCAGCGGTTTCATTGCTTCCATTGACGTCCCGATCGATCCGACGACTGAGC AGGATCAGTCGATGAACATGCCAAGTGGTGGCGGAATGGGTGGAGGCCCAAGTGGCGGTGGAATGGGTGGCCCAGGAGAG GGTATGACCCCTCCAGATGGAATGACCCCTCCCTCTGAGCCTCAGTAA
Upstream 100 bases:
>100_bases TAGAGAAACCTACCCAGTAAGCATTCAGGAACCATTCAGAAACTTTTCCTAGCATGTCTCTATCAGCGTAAACATCCGAA CACGAAAGGTTGGAAAAATC
Downstream 100 bases:
>100_bases ATAAACGGTTCCCGGCTTAAGTTTGTGGGGTCGAAGACCTCTAGCAGTTGGGGTGCAGAGTCCACTTCCTCGTAGCCGAG TGAGTGGGCGAGCCGGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Protocatechuate Dioxygenase; Twin-Arginine Translocation Pathway Signal; Dioxygenase; Protocatechuate 3 4-Dioxygenase; Catechol 1 2-Dioxygenase; Dioxygenase Subfamily Protein; Protocatechuate 3 4-Dioxygenase Beta Subunit Like Protein; Intradiol-Dioxygenase-Like Protein; Protocatechuate 3 4-Dioxygenase Beta Subunit; Protocatechuate 3 4-Dioxygenase Subunit Beta; Intradiol Dioxygenase
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MAEQLRQFEGRVLPNQSEDLEDQGLGFDLGTVFSRRKVLGFIGVGGAGVALAACSPSGSSAASSTSSASSSAAATSSAAA ETLTEMKSETAGPYPGDGSNGPDVLEVSGVERQDITKSIDTDTVAEGVPLTLTMTILDMNNNNQPMEGAAVYIWHCDAPG RYSMYDDELLEETYLRGVQITDKYGQVTFDTIFPGCYAGRWVHIHFEVFPDRESISDSTNNILTSQIALDEASAASVYAL DVYGDSLTNLNNITLESDNVFSDGWDQQMANLTGDATSGFIASIDVPIDPTTEQDQSMNMPSGGGMGGGPSGGGMGGPGE GMTPPDGMTPPSEPQ
Sequences:
>Translated_335_residues MAEQLRQFEGRVLPNQSEDLEDQGLGFDLGTVFSRRKVLGFIGVGGAGVALAACSPSGSSAASSTSSASSSAAATSSAAA ETLTEMKSETAGPYPGDGSNGPDVLEVSGVERQDITKSIDTDTVAEGVPLTLTMTILDMNNNNQPMEGAAVYIWHCDAPG RYSMYDDELLEETYLRGVQITDKYGQVTFDTIFPGCYAGRWVHIHFEVFPDRESISDSTNNILTSQIALDEASAASVYAL DVYGDSLTNLNNITLESDNVFSDGWDQQMANLTGDATSGFIASIDVPIDPTTEQDQSMNMPSGGGMGGGPSGGGMGGPGE GMTPPDGMTPPSEPQ >Mature_334_residues AEQLRQFEGRVLPNQSEDLEDQGLGFDLGTVFSRRKVLGFIGVGGAGVALAACSPSGSSAASSTSSASSSAAATSSAAAE TLTEMKSETAGPYPGDGSNGPDVLEVSGVERQDITKSIDTDTVAEGVPLTLTMTILDMNNNNQPMEGAAVYIWHCDAPGR YSMYDDELLEETYLRGVQITDKYGQVTFDTIFPGCYAGRWVHIHFEVFPDRESISDSTNNILTSQIALDEASAASVYALD VYGDSLTNLNNITLESDNVFSDGWDQQMANLTGDATSGFIASIDVPIDPTTEQDQSMNMPSGGGMGGGPSGGGMGGPGEG MTPPDGMTPPSEPQ
Specific function: Unknown
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35034; Mature: 34902
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQLRQFEGRVLPNQSEDLEDQGLGFDLGTVFSRRKVLGFIGVGGAGVALAACSPSGSS CCHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHHHHHHEEEEEECCCCCEEEEEECCCCCC AASSTSSASSSAAATSSAAAETLTEMKSETAGPYPGDGSNGPDVLEVSGVERQDITKSID CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHCC TDTVAEGVPLTLTMTILDMNNNNQPMEGAAVYIWHCDAPGRYSMYDDELLEETYLRGVQI CHHHHCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCEEE TDKYGQVTFDTIFPGCYAGRWVHIHFEVFPDRESISDSTNNILTSQIALDEASAASVYAL ECCCCCEEEEHHCCCCCCCCEEEEEEEEECCHHHCCCCCCCEEEHHEECCCCCCCEEEEE DVYGDSLTNLNNITLESDNVFSDGWDQQMANLTGDATSGFIASIDVPIDPTTEQDQSMNM EECCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHCCCC PSGGGMGGGPSGGGMGGPGEGMTPPDGMTPPSEPQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AEQLRQFEGRVLPNQSEDLEDQGLGFDLGTVFSRRKVLGFIGVGGAGVALAACSPSGSS CHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHHHHHHEEEEEECCCCCEEEEEECCCCCC AASSTSSASSSAAATSSAAAETLTEMKSETAGPYPGDGSNGPDVLEVSGVERQDITKSID CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHCC TDTVAEGVPLTLTMTILDMNNNNQPMEGAAVYIWHCDAPGRYSMYDDELLEETYLRGVQI CHHHHCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCEEE TDKYGQVTFDTIFPGCYAGRWVHIHFEVFPDRESISDSTNNILTSQIALDEASAASVYAL ECCCCCEEEEHHCCCCCCCCEEEEEEEEECCHHHCCCCCCCEEEHHEECCCCCCCEEEEE DVYGDSLTNLNNITLESDNVFSDGWDQQMANLTGDATSGFIASIDVPIDPTTEQDQSMNM EECCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHCCCC PSGGGMGGGPSGGGMGGPGEGMTPPDGMTPPSEPQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA