| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is tyrA [H]
Identifier: 145294345
GI number: 145294345
Start: 327359
End: 328381
Strand: Reverse
Name: tyrA [H]
Synonym: cgR_0300
Alternate gene names: 145294345
Gene position: 328381-327359 (Counterclockwise)
Preceding gene: 145294352
Following gene: 145294342
Centisome position: 9.91
GC content: 60.9
Gene sequence:
>1023_bases GTGACTACCAAAGACATTTCCCGCCCAGTATGCATCCTGGGCCTCGGCCTCATCGGCGGATCCCTCCTCCGCGACCTCCA TGCAGCCAACCACTCCGTCTTCGGCTACAACCGCTCACGCTCCGGCGCCAAATCAGCCGTCGACGAAGGCTTCGACGTTT CCGCCGATCTTGAAGCAACCCTCCAGCGTGCAGCCGCCGAAGATGCGCTCATCGTCCTCGCGGTCCCCATGACCGCAATC GATTCGCTTCTCGACGCCATCCACACCCACGCACCAAACAACGGCTTCACCGACGTGGTATCCGTAAAAACCGCCGTCTA CGACGCAGTAAAAGCCCGCAACATGCAACACCGCTATGTGGGATCCCACCCCATGGCAGGCACCGCCAACTCCGGCTGGA GCGCATCCATGGACGGACTGTTCAAACGAGCAGTATGGGTGGTCACCTTCGACCAGCTTTTCGACGGCACCGACATCAAC TCCACCTGGATCAGCATCTGGAAAGACGTCGTCCAAATGGCACTCGCCGTGGGCGCTGAAGTTGTCCCATCCCGAGTTGG CCCACACGATGCAGCAGCAGCACGAGTGTCTCATTTAACACACATCCTGGCTGAAACCCTCGCCATCGTCGGTGACAACG GTGGCGCACTGTCTCTCTCTTTGGCCGCTGGCAGCTACCGCGACTCCACCCGCGTTGCAGGCACCGACCCAGGACTCGTC CGCGCCATGTGTGAAAGCAACGCCGGCCCATTGATCAAAGCCCTCGACGAAGCACTGGCGATCCTCCACGAAGCCCGCGA AGGCCTCACCGCAGAACAGCCAAACATCGAGCAACTTGCCGACAACGGCTACCGATCCCGCATCCGCTACGAAGCCCGCT CCGGCCAGCGACGCGCCAAAGAATCCGTTAGCCCTACCATCACCTCATCCAGGCCAGTGCTCCGTCTCCACCCGGGCACA CCAAACTGGGAAAAGCAGCTCATCCACGCTGAAACCCTCGGCGCACGGATCGAAGTGTTCTAG
Upstream 100 bases:
>100_bases CCATTTACCTTCAACTAAGGTAGCCGTAACTGCAAAGCTCAGGCCATCCTCTTCAGTGTTCATAGAGATAACCGTAGTAG GTATGTGCCACACTTGTCAG
Downstream 100 bases:
>100_bases TTTTATCGGCTGATGATTCTCAGGCGATTCCTAATGTGAATTCGACACCAAGATTTCTTAATTTTGGCCACCATTTTGCC AAAATCTTGGTGTCGAACGT
Product: prephenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAI DSLLDAIHTHAPNNGFTDVVSVKTAVYDAVKARNMQHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDIN STWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAETLAIVGDNGGALSLSLAAGSYRDSTRVAGTDPGLV RAMCESNAGPLIKALDEALAILHEAREGLTAEQPNIEQLADNGYRSRIRYEARSGQRRAKESVSPTITSSRPVLRLHPGT PNWEKQLIHAETLGARIEVF
Sequences:
>Translated_340_residues MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAI DSLLDAIHTHAPNNGFTDVVSVKTAVYDAVKARNMQHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDIN STWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAETLAIVGDNGGALSLSLAAGSYRDSTRVAGTDPGLV RAMCESNAGPLIKALDEALAILHEAREGLTAEQPNIEQLADNGYRSRIRYEARSGQRRAKESVSPTITSSRPVLRLHPGT PNWEKQLIHAETLGARIEVF >Mature_339_residues TTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAID SLLDAIHTHAPNNGFTDVVSVKTAVYDAVKARNMQHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINS TWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAETLAIVGDNGGALSLSLAAGSYRDSTRVAGTDPGLVR AMCESNAGPLIKALDEALAILHEAREGLTAEQPNIEQLADNGYRSRIRYEARSGQRRAKESVSPTITSSRPVLRLHPGTP NWEKQLIHAETLGARIEVF
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR002912 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01842 ACT; PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 36318; Mature: 36187
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEAT CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHCCCCCCCCHHHH LQRAAAEDALIVLAVPMTAIDSLLDAIHTHAPNNGFTDVVSVKTAVYDAVKARNMQHRYV HHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCC GSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAE CCCCCCCCCCCCCCCHHHHHHHHHHHEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHH VVPSRVGPHDAAAARVSHLTHILAETLAIVGDNGGALSLSLAAGSYRDSTRVAGTDPGLV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHH RAMCESNAGPLIKALDEALAILHEAREGLTAEQPNIEQLADNGYRSRIRYEARSGQRRAK HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHEEEHHHCCHHHHH ESVSPTITSSRPVLRLHPGTPNWEKQLIHAETLGARIEVF HCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEC >Mature Secondary Structure TTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEAT CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHCCCCCCCCHHHH LQRAAAEDALIVLAVPMTAIDSLLDAIHTHAPNNGFTDVVSVKTAVYDAVKARNMQHRYV HHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCC GSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAE CCCCCCCCCCCCCCCHHHHHHHHHHHEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHH VVPSRVGPHDAAAARVSHLTHILAETLAIVGDNGGALSLSLAAGSYRDSTRVAGTDPGLV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHH RAMCESNAGPLIKALDEALAILHEAREGLTAEQPNIEQLADNGYRSRIRYEARSGQRRAK HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHEEEHHHCCHHHHH ESVSPTITSSRPVLRLHPGTPNWEKQLIHAETLGARIEVF HCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA