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The map label for this gene is insF1 [C]

Identifier: 145294195

GI number: 145294195

Start: 169746

End: 170393

Strand: Reverse

Name: insF1 [C]

Synonym: cgR_0152

Alternate gene names: 145294195

Gene position: 170393-169746 (Counterclockwise)

Preceding gene: 145294196

Following gene: 145294194

Centisome position: 5.14

GC content: 64.97

Gene sequence:

>648_bases
TTGATCGTCGCCTTCATCGACCAGATGAAAAAAGAAGGCTTTGCTGTCGAGTCGGCCCGCCATGTGCTGCGTGAGCAGGG
CGTGCAGGTCGCGGCGAGGACCTACCACCACTGGAAGAAAGTACCGGCCACACGGACCATGACGGACGCGCAGATCCTCA
ACGCCCTCTACGAGCTTCGGGACGCACCGGAATCCCTGTACGGGCGGCGCAAGATGGTCGCCCACCTGCGTCGGCAGGGT
CATGCGAGGGCGCATTGCACCGTCGGCCGGTTGATGCGCCTGGCCGGGATGAACGGTATCTTCAGGCGCCGGACCACGGT
GCGGACCACGATTCCCGGGTCCGGGGACCGTGCCCCTGACCTGCTGAACCGGAACTTTACCGCCGAGGCGTCCAACCGGG
TATGGGTCGCCGATTTCACCTACGCCCGCACCGGTTCGGGCTGGGTCTATGTGGCCTTCATCGTTGACGTGTACTCGCAG
CGCATCGTCGGCTGGCACGCGCAGACCTCCCGCGGAGTCGAACTGGTGCGTATCCCACGGTACCCGGCGCTGTGGGAGCG
TGACCGCACCCAGCGTCCCGTTGTCCGTGGTGAGCTGACGCACCACTCGGATGCGGGCAGCAAGTCACACCGCGGTGAAA
TTCACTGA

Upstream 100 bases:

>100_bases
TGGGATTCCGCACCCCTGCTGAGCAGTATGAAGCACTGTTGCGTTGACGGATTGAACCCAAGACGGTTTTCTTCGCCGGG
GAGCTCGACCCCGGAAACCG

Downstream 100 bases:

>100_bases
GAACCTGGCCCTGCAGGGCATCACCCCGTCGATCGGGAGTGTGGGTGATGCCTACGACAATGCGCTGATGGAGTCGAGCA
ACGGGCTGGACAAGACCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MIVAFIDQMKKEGFAVESARHVLREQGVQVAARTYHHWKKVPATRTMTDAQILNALYELRDAPESLYGRRKMVAHLRRQG
HARAHCTVGRLMRLAGMNGIFRRRTTVRTTIPGSGDRAPDLLNRNFTAEASNRVWVADFTYARTGSGWVYVAFIVDVYSQ
RIVGWHAQTSRGVELVRIPRYPALWERDRTQRPVVRGELTHHSDAGSKSHRGEIH

Sequences:

>Translated_215_residues
MIVAFIDQMKKEGFAVESARHVLREQGVQVAARTYHHWKKVPATRTMTDAQILNALYELRDAPESLYGRRKMVAHLRRQG
HARAHCTVGRLMRLAGMNGIFRRRTTVRTTIPGSGDRAPDLLNRNFTAEASNRVWVADFTYARTGSGWVYVAFIVDVYSQ
RIVGWHAQTSRGVELVRIPRYPALWERDRTQRPVVRGELTHHSDAGSKSHRGEIH
>Mature_215_residues
MIVAFIDQMKKEGFAVESARHVLREQGVQVAARTYHHWKKVPATRTMTDAQILNALYELRDAPESLYGRRKMVAHLRRQG
HARAHCTVGRLMRLAGMNGIFRRRTTVRTTIPGSGDRAPDLLNRNFTAEASNRVWVADFTYARTGSGWVYVAFIVDVYSQ
RIVGWHAQTSRGVELVRIPRYPALWERDRTQRPVVRGELTHHSDAGSKSHRGEIH

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=140, Percent_Identity=41.4285714285714, Blast_Score=110, Evalue=1e-24,
Organism=Escherichia coli, GI1788405, Length=235, Percent_Identity=24.6808510638298, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787263, Length=235, Percent_Identity=24.6808510638298, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1786753, Length=235, Percent_Identity=24.6808510638298, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1786570, Length=235, Percent_Identity=24.6808510638298, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1786490, Length=235, Percent_Identity=24.6808510638298, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 24610; Mature: 24610

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVAFIDQMKKEGFAVESARHVLREQGVQVAARTYHHWKKVPATRTMTDAQILNALYELR
CEEHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
DAPESLYGRRKMVAHLRRQGHARAHCTVGRLMRLAGMNGIFRRRTTVRTTIPGSGDRAPD
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEECCCCCCCCHH
LLNRNFTAEASNRVWVADFTYARTGSGWVYVAFIVDVYSQRIVGWHAQTSRGVELVRIPR
HHCCCCCCCCCCEEEEEEEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
YPALWERDRTQRPVVRGELTHHSDAGSKSHRGEIH
CCCHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIVAFIDQMKKEGFAVESARHVLREQGVQVAARTYHHWKKVPATRTMTDAQILNALYELR
CEEHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
DAPESLYGRRKMVAHLRRQGHARAHCTVGRLMRLAGMNGIFRRRTTVRTTIPGSGDRAPD
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEECCCCCCCCHH
LLNRNFTAEASNRVWVADFTYARTGSGWVYVAFIVDVYSQRIVGWHAQTSRGVELVRIPR
HHCCCCCCCCCCEEEEEEEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
YPALWERDRTQRPVVRGELTHHSDAGSKSHRGEIH
CCCHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2159625; 2824781 [H]