| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145294185
Identifier: 145294185
GI number: 145294185
Start: 158420
End: 158788
Strand: Reverse
Name: 145294185
Synonym: cgR_0142
Alternate gene names: NA
Gene position: 158788-158420 (Counterclockwise)
Preceding gene: 145294186
Following gene: 145294184
Centisome position: 4.79
GC content: 60.7
Gene sequence:
>369_bases GTGTCGCGCTTCCAACTTCTCACCGATGACCAATGGGCCCTGATCTCCGATAAGCTGCCCCATCGCATCGGCAAAAAGGG CCGCCCCTTCTCCGACCCGAGGCTCATGCTCGAAGGCATCATCTACCGGCTGCGCTGCGGCATTCCCTGGCGTGACCTGC CGGAATGCTTCGGATCCTGGCACACCGTCTACCACTGGTACAACCGCATGGCCAAAGACGGCATCTTCGATGAGATCGTG ACCACCTTGATCGCAGCAGCCGACCACCAGGGTCTGGTGGACTGGTCGGTCAGCATCGACTCGACGATCAGCCGCGCCCA TCAGCACGCTACGAATATCACCCGCCACACAGGGGGCTTTGTCGAATGA
Upstream 100 bases:
>100_bases AAGTGGCCGGTGAACTACTCGCGGTAGAGCAACGTGAGACGATTTCCGGCTAGAGCGTGTTTGATAATTGAGGGTAGCGC GGCATGGGATCAGAGATCCC
Downstream 100 bases:
>100_bases CCACAATCGGCTGACCGAGCGGCCTGACCACGGGTTCGGACGCTCCCGCGGTGGCCTATCAACCAAGACCCATGCCCTGG TTGATGGCCAGTGCCTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSRFQLLTDDQWALISDKLPHRIGKKGRPFSDPRLMLEGIIYRLRCGIPWRDLPECFGSWHTVYHWYNRMAKDGIFDEIV TTLIAAADHQGLVDWSVSIDSTISRAHQHATNITRHTGGFVE
Sequences:
>Translated_122_residues MSRFQLLTDDQWALISDKLPHRIGKKGRPFSDPRLMLEGIIYRLRCGIPWRDLPECFGSWHTVYHWYNRMAKDGIFDEIV TTLIAAADHQGLVDWSVSIDSTISRAHQHATNITRHTGGFVE >Mature_121_residues SRFQLLTDDQWALISDKLPHRIGKKGRPFSDPRLMLEGIIYRLRCGIPWRDLPECFGSWHTVYHWYNRMAKDGIFDEIVT TLIAAADHQGLVDWSVSIDSTISRAHQHATNITRHTGGFVE
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To transposase of insertion sequence IS6501 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14091; Mature: 13960
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFQLLTDDQWALISDKLPHRIGKKGRPFSDPRLMLEGIIYRLRCGIPWRDLPECFGSW CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH HTVYHWYNRMAKDGIFDEIVTTLIAAADHQGLVDWSVSIDSTISRAHQHATNITRHTGGF HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCC VE CC >Mature Secondary Structure SRFQLLTDDQWALISDKLPHRIGKKGRPFSDPRLMLEGIIYRLRCGIPWRDLPECFGSW CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH HTVYHWYNRMAKDGIFDEIVTTLIAAADHQGLVDWSVSIDSTISRAHQHATNITRHTGGF HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCC VE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424; 8190622 [H]